RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 CRY2Q49AN0 593 aa17.9■□□□□ 0.46
RAB40B-204ENST00000571554 DUSP27Q5VZP5 1158 aa17.9■□□□□ 0.46
RAB40B-204ENST00000571554 ZNF277Q9NRM2 450 aaPredicted RBP17.9■□□□□ 0.46
RAB40B-204ENST00000571554 ALDH1B1P30837 517 aa17.89■□□□□ 0.45
RAB40B-204ENST00000571554 PPP1R42Q7Z4L9 355 aa17.89■□□□□ 0.45
RAB40B-204ENST00000571554 RBM46Q8TBY0 533 aaKnown RBP17.89■□□□□ 0.45
RAB40B-204ENST00000571554 UTP14AQ9BVJ6 771 aaKnown RBP17.89■□□□□ 0.45
RAB40B-204ENST00000571554 ZNF853P0CG23 659 aa17.88■□□□□ 0.45
RAB40B-204ENST00000571554 PARP10Q53GL7 1025 aa17.88■□□□□ 0.45
RAB40B-204ENST00000571554 SYNE4Q8N205 404 aa17.88■□□□□ 0.45
RAB40B-204ENST00000571554 RIC1Q4ADV7 1423 aa17.88■□□□□ 0.45
RAB40B-204ENST00000571554 LAMB2P55268 1798 aa17.87■□□□□ 0.45
RAB40B-204ENST00000571554 FKBP4Q02790 459 aaKnown RBP eCLIP17.87■□□□□ 0.45
RAB40B-204ENST00000571554 IFT57Q9NWB7 429 aa17.87■□□□□ 0.45
RAB40B-204ENST00000571554 DDNO94850 711 aaPredicted RBP17.86■□□□□ 0.45
RAB40B-204ENST00000571554 HOXB7P09629 217 aa17.86■□□□□ 0.45
RAB40B-204ENST00000571554 HCLS1P14317 486 aaPredicted RBP17.86■□□□□ 0.45
RAB40B-204ENST00000571554 VEGFAP15692 232 aaPredicted RBP17.86■□□□□ 0.45
RAB40B-204ENST00000571554 GNAI1P63096 354 aa17.86■□□□□ 0.45
RAB40B-204ENST00000571554 HTRA3P83110 453 aa17.86■□□□□ 0.45
RAB40B-204ENST00000571554 TCIRG1Q13488 830 aa17.86■□□□□ 0.45
RAB40B-204ENST00000571554 DPY19L2Q6NUT2 758 aa17.86■□□□□ 0.45
RAB40B-204ENST00000571554 NLRP10Q86W26 655 aa17.86■□□□□ 0.45
RAB40B-204ENST00000571554 MRS2Q9HD23 443 aa17.86■□□□□ 0.45
RAB40B-204ENST00000571554 DBF4Q9UBU7 674 aaPredicted RBP17.86■□□□□ 0.45
RAB40B-204ENST00000571554 WDR90Q96KV7 1748 aa17.86■□□□□ 0.45
RAB40B-204ENST00000571554 POTECB2RU33 542 aa17.85■□□□□ 0.45
RAB40B-204ENST00000571554 ANP32CO43423 234 aa17.85■□□□□ 0.45
RAB40B-204ENST00000571554 HSP90AB3PQ58FF7 597 aa17.85■□□□□ 0.45
RAB40B-204ENST00000571554 RTKN2Q8IZC4 609 aa17.85■□□□□ 0.45
RAB40B-204ENST00000571554 RBM17Q96I25 401 aaKnown RBP17.85■□□□□ 0.45
RAB40B-204ENST00000571554 TRMT112Q9UI30 125 aaKnown RBP17.85■□□□□ 0.45
RAB40B-204ENST00000571554 ATP5J2-PTCD1G3V325 749 aa17.84■□□□□ 0.45
RAB40B-204ENST00000571554 PPEF1O14829 653 aaPredicted RBP17.84■□□□□ 0.45
RAB40B-204ENST00000571554 HOXA10P31260 410 aaPredicted RBP17.84■□□□□ 0.45
RAB40B-204ENST00000571554 CALD1Q05682 793 aaKnown RBP17.84■□□□□ 0.45
RAB40B-204ENST00000571554 C8orf58Q8NAV2 365 aa17.84■□□□□ 0.45
RAB40B-204ENST00000571554 NLRP3Q96P20 1036 aa17.84■□□□□ 0.45
RAB40B-204ENST00000571554 SNED1Q8TER0 1413 aa17.83■□□□□ 0.45
RAB40B-204ENST00000571554 ZNF541Q9H0D2 1346 aa17.83■□□□□ 0.44
RAB40B-204ENST00000571554 IARSP41252 1262 aaKnown RBP17.83■□□□□ 0.44
RAB40B-204ENST00000571554 APLP1P51693 650 aa17.83■□□□□ 0.44
RAB40B-204ENST00000571554 ANKRD13DQ6ZTN6 518 aa17.83■□□□□ 0.44
RAB40B-204ENST00000571554 PLBD2Q8NHP8 589 aa17.83■□□□□ 0.44
RAB40B-204ENST00000571554 TSR2Q969E8 191 aaKnown RBP17.83■□□□□ 0.44
RAB40B-204ENST00000571554 TAF1P21675 1872 aa17.83■□□□□ 0.44
RAB40B-204ENST00000571554 ABCC4O15439 1325 aa17.82■□□□□ 0.44
RAB40B-204ENST00000571554 FSTL1Q12841 308 aa17.82■□□□□ 0.44
RAB40B-204ENST00000571554 RTL5Q5HYW3 569 aaPredicted RBP17.82■□□□□ 0.44
RAB40B-204ENST00000571554 SMC1BQ8NDV3 1235 aa17.82■□□□□ 0.44
RAB40B-204ENST00000571554 CRAMP1Q96RY5 1269 aa17.82■□□□□ 0.44
RAB40B-204ENST00000571554 PHAXQ9H814 394 aaKnown RBP17.82■□□□□ 0.44
RAB40B-204ENST00000571554 HYPKQ9NX55 129 aa17.82■□□□□ 0.44
RAB40B-204ENST00000571554 SALL2Q9Y467 1007 aaPredicted RBP17.82■□□□□ 0.44
RAB40B-204ENST00000571554 DDX60Q8IY21 1712 aaKnown RBP17.81■□□□□ 0.44
RAB40B-204ENST00000571554 COL4A5P29400 1685 aa17.81■□□□□ 0.44
RAB40B-204ENST00000571554 SH3TC1Q8TE82 1336 aa17.81■□□□□ 0.44
RAB40B-204ENST00000571554 SLC10A5Q5PT55 438 aa17.81■□□□□ 0.44
RAB40B-204ENST00000571554 TSPYL6Q8N831 410 aa17.81■□□□□ 0.44
RAB40B-204ENST00000571554 POTEIP0CG38 1075 aa17.8■□□□□ 0.44
RAB40B-204ENST00000571554 POTEJP0CG39 1038 aa17.8■□□□□ 0.44
RAB40B-204ENST00000571554 ISCA1Q9BUE6 129 aa17.8■□□□□ 0.44
RAB40B-204ENST00000571554 RNF123Q5XPI4 1314 aa17.79■□□□□ 0.44
RAB40B-204ENST00000571554 RIC3Q7Z5B4 369 aa17.79■□□□□ 0.44
RAB40B-204ENST00000571554 FAM89AQ96GI7 184 aa17.79■□□□□ 0.44
RAB40B-204ENST00000571554 PSMD1Q99460 953 aa17.79■□□□□ 0.44
RAB40B-204ENST00000571554 GOLGA2Q08379 1002 aa17.78■□□□□ 0.44
RAB40B-204ENST00000571554 CC2D2BQ6DHV5 1058 aa17.78■□□□□ 0.44
RAB40B-204ENST00000571554 WWC1Q8IX03 1113 aa17.78■□□□□ 0.44
RAB40B-204ENST00000571554 MYD88Q99836 296 aa17.77■□□□□ 0.44
RAB40B-204ENST00000571554 DDX46Q7L014 1031 aaKnown RBP17.76■□□□□ 0.43
RAB40B-204ENST00000571554 LARGE2Q8N3Y3 721 aa17.76■□□□□ 0.43
RAB40B-204ENST00000571554 DNAJC5GQ8N7S2 189 aa17.76■□□□□ 0.43
RAB40B-204ENST00000571554 JDP2Q8WYK2 163 aa17.76■□□□□ 0.43
RAB40B-204ENST00000571554 ATP6V0A2Q9Y487 856 aa17.76■□□□□ 0.43
RAB40B-204ENST00000571554 COL4A1P02462 1669 aa17.76■□□□□ 0.43
RAB40B-204ENST00000571554 SCN4AP35499 1836 aa17.75■□□□□ 0.43
RAB40B-204ENST00000571554 FZD9O00144 591 aa17.75■□□□□ 0.43
RAB40B-204ENST00000571554 AOC3Q16853 763 aa17.75■□□□□ 0.43
RAB40B-204ENST00000571554 CCDC27Q2M243 656 aa17.75■□□□□ 0.43
RAB40B-204ENST00000571554 CCDC30Q5VVM6 783 aa17.75■□□□□ 0.43
RAB40B-204ENST00000571554 JARID2Q92833 1246 aaPredicted RBP17.75■□□□□ 0.43
RAB40B-204ENST00000571554 TMX4Q9H1E5 349 aaPredicted RBP17.75■□□□□ 0.43
RAB40B-204ENST00000571554 GJA3Q9Y6H8 435 aa17.75■□□□□ 0.43
RAB40B-204ENST00000571554 PPIP5K2O43314 1243 aa17.74■□□□□ 0.43
RAB40B-204ENST00000571554 GRAPQ13588 217 aa17.74■□□□□ 0.43
RAB40B-204ENST00000571554 EAPPQ56P03 285 aaPredicted RBP17.74■□□□□ 0.43
RAB40B-204ENST00000571554 FAM9BQ8IZU0 186 aa17.74■□□□□ 0.43
RAB40B-204ENST00000571554 GRAPLQ8TC17 118 aaPredicted RBP17.74■□□□□ 0.43
RAB40B-204ENST00000571554 L3MBTL3Q96JM7 780 aaPredicted RBP17.74■□□□□ 0.43
RAB40B-204ENST00000571554 TAF1DQ9H5J8 278 aaPredicted RBP17.74■□□□□ 0.43
RAB40B-204ENST00000571554 IQCA1LA6NCM1 817 aa17.73■□□□□ 0.43
RAB40B-204ENST00000571554 IRS4O14654 1257 aaPredicted RBP17.73■□□□□ 0.43
RAB40B-204ENST00000571554 CHADLQ6NUI6 762 aa17.73■□□□□ 0.43
RAB40B-204ENST00000571554 BBOX1O75936 387 aa17.72■□□□□ 0.43
RAB40B-204ENST00000571554 EIF6P56537 245 aaKnown RBP17.72■□□□□ 0.43
RAB40B-204ENST00000571554 TWISTNBQ3B726 338 aaPredicted RBP17.72■□□□□ 0.43
RAB40B-204ENST00000571554 DPP8Q6V1X1 898 aaPredicted RBP17.72■□□□□ 0.43
RAB40B-204ENST00000571554 NIM1KQ8IY84 436 aa17.72■□□□□ 0.43
RAB40B-204ENST00000571554 CELF1Q92879 486 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms