RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 CNKSR1Q969H4 720 aa16.18■□□□□ 0.18
CTDNEP1-205ENST00000570828 FAM163AQ96GL9 167 aaPredicted RBP16.18■□□□□ 0.18
CTDNEP1-205ENST00000570828 KDM2BQ8NHM5 1336 aa16.18■□□□□ 0.18
CTDNEP1-205ENST00000570828 ZC3H4Q9UPT8 1303 aaKnown RBP16.18■□□□□ 0.18
CTDNEP1-205ENST00000570828 ANKRD31Q8N7Z5 1873 aa16.17■□□□□ 0.18
CTDNEP1-205ENST00000570828 SRGNP10124 158 aa16.17■□□□□ 0.18
CTDNEP1-205ENST00000570828 GTF2E1P29083 439 aaPredicted RBP16.17■□□□□ 0.18
CTDNEP1-205ENST00000570828 MASTLQ96GX5 879 aa16.17■□□□□ 0.18
CTDNEP1-205ENST00000570828 CEP350Q5VT06 3117 aa16.17■□□□□ 0.18
CTDNEP1-205ENST00000570828 COL11A2P13942 1736 aaPredicted RBP16.16■□□□□ 0.18
CTDNEP1-205ENST00000570828 NFKBIEO00221 500 aa16.16■□□□□ 0.18
CTDNEP1-205ENST00000570828 C21orf2O43822 256 aa16.16■□□□□ 0.18
CTDNEP1-205ENST00000570828 EIF2S2P20042 333 aaKnown RBP16.16■□□□□ 0.18
CTDNEP1-205ENST00000570828 PRPF40BQ6NWY9 871 aaKnown RBP16.16■□□□□ 0.18
CTDNEP1-205ENST00000570828 TTLL7Q6ZT98 887 aa16.16■□□□□ 0.18
CTDNEP1-205ENST00000570828 ZBTB3Q9H5J0 574 aa16.16■□□□□ 0.18
CTDNEP1-205ENST00000570828 NMRK2Q9NPI5 230 aa16.16■□□□□ 0.18
CTDNEP1-205ENST00000570828 BMP2KQ9NSY1 1161 aaPredicted RBP16.16■□□□□ 0.18
CTDNEP1-205ENST00000570828 NPR1P16066 1061 aa16.15■□□□□ 0.18
CTDNEP1-205ENST00000570828 SOGA3Q5TF21 947 aa16.15■□□□□ 0.18
CTDNEP1-205ENST00000570828 NYXQ9GZU5 481 aa16.15■□□□□ 0.18
CTDNEP1-205ENST00000570828 TRIM35Q9UPQ4 493 aa16.15■□□□□ 0.18
CTDNEP1-205ENST00000570828 LAS1LQ9Y4W2 734 aaKnown RBP16.15■□□□□ 0.18
CTDNEP1-205ENST00000570828 LCE2DQ5TA82 110 aaPredicted RBP16.14■□□□□ 0.17
CTDNEP1-205ENST00000570828 CHL1O00533 1208 aa16.13■□□□□ 0.17
CTDNEP1-205ENST00000570828 TOMM70O94826 608 aa16.13■□□□□ 0.17
CTDNEP1-205ENST00000570828 GPTP24298 496 aa16.13■□□□□ 0.17
CTDNEP1-205ENST00000570828 C16orf71Q8IYS4 520 aaPredicted RBP16.13■□□□□ 0.17
CTDNEP1-205ENST00000570828 TAOK3Q9H2K8 898 aa16.13■□□□□ 0.17
CTDNEP1-205ENST00000570828 IBTKQ9P2D0 1353 aaPredicted RBP16.13■□□□□ 0.17
CTDNEP1-205ENST00000570828 KLRG2A4D1S0 409 aaPredicted RBP16.12■□□□□ 0.17
CTDNEP1-205ENST00000570828 HSPA6P17066 643 aa16.12■□□□□ 0.17
CTDNEP1-205ENST00000570828 PRELPP51888 382 aa16.12■□□□□ 0.17
CTDNEP1-205ENST00000570828 PDIA6Q15084 440 aa16.12■□□□□ 0.17
CTDNEP1-205ENST00000570828 NECTIN2Q92692 538 aa16.12■□□□□ 0.17
CTDNEP1-205ENST00000570828 LTBP3Q9NS15 1303 aa16.12■□□□□ 0.17
CTDNEP1-205ENST00000570828 ABCC12Q96J65 1359 aa16.12■□□□□ 0.17
CTDNEP1-205ENST00000570828 ANXA1P04083 346 aa16.11■□□□□ 0.17
CTDNEP1-205ENST00000570828 TIE1P35590 1138 aa16.11■□□□□ 0.17
CTDNEP1-205ENST00000570828 PROSER3Q2NL68 480 aa16.11■□□□□ 0.17
CTDNEP1-205ENST00000570828 GIGYF2Q6Y7W6 1299 aaKnown RBP16.11■□□□□ 0.17
CTDNEP1-205ENST00000570828 LRP10Q7Z4F1 713 aa16.11■□□□□ 0.17
CTDNEP1-205ENST00000570828 NUTM1Q86Y26 1132 aa16.11■□□□□ 0.17
CTDNEP1-205ENST00000570828 UBN2Q6ZU65 1347 aa16.11■□□□□ 0.17
CTDNEP1-205ENST00000570828 POTEFA5A3E0 1075 aa16.1■□□□□ 0.17
CTDNEP1-205ENST00000570828 MAP3K13O43283 966 aa16.1■□□□□ 0.17
CTDNEP1-205ENST00000570828 KRT24Q2M2I5 525 aa16.1■□□□□ 0.17
CTDNEP1-205ENST00000570828 ERFEQ4G0M1 354 aa16.1■□□□□ 0.17
CTDNEP1-205ENST00000570828 CCDC93Q567U6 631 aa16.1■□□□□ 0.17
CTDNEP1-205ENST00000570828 APAF1O14727 1248 aa16.09■□□□□ 0.17
CTDNEP1-205ENST00000570828 HOXB7P09629 217 aa16.09■□□□□ 0.17
CTDNEP1-205ENST00000570828 CALD1Q05682 793 aaKnown RBP16.09■□□□□ 0.17
CTDNEP1-205ENST00000570828 PARP10Q53GL7 1025 aa16.09■□□□□ 0.17
CTDNEP1-205ENST00000570828 HDGFL1Q5TGJ6 251 aa16.09■□□□□ 0.17
CTDNEP1-205ENST00000570828 ZNF34Q8IZ26 560 aa16.09■□□□□ 0.17
CTDNEP1-205ENST00000570828 CFAP44Q96MT7 982 aa16.09■□□□□ 0.17
CTDNEP1-205ENST00000570828 RRAGCQ9HB90 399 aa16.09■□□□□ 0.17
CTDNEP1-205ENST00000570828 TRPC6Q9Y210 931 aa16.09■□□□□ 0.17
CTDNEP1-205ENST00000570828 GLTPD2A6NH11 291 aa16.08■□□□□ 0.16
CTDNEP1-205ENST00000570828 ALDH1B1P30837 517 aa16.08■□□□□ 0.16
CTDNEP1-205ENST00000570828 AIMP1Q12904 312 aaKnown RBP16.08■□□□□ 0.16
CTDNEP1-205ENST00000570828 CRY2Q49AN0 593 aa16.08■□□□□ 0.16
CTDNEP1-205ENST00000570828 SUSD4Q5VX71 490 aa16.08■□□□□ 0.16
CTDNEP1-205ENST00000570828 PPP1R42Q7Z4L9 355 aa16.08■□□□□ 0.16
CTDNEP1-205ENST00000570828 RBM46Q8TBY0 533 aaKnown RBP16.08■□□□□ 0.16
CTDNEP1-205ENST00000570828 XAGE3Q8WTP9 111 aa16.08■□□□□ 0.16
CTDNEP1-205ENST00000570828 RPGRQ92834 1020 aaKnown RBP16.08■□□□□ 0.16
CTDNEP1-205ENST00000570828 DDX21Q9NR30 783 aaKnown RBP eCLIP16.08■□□□□ 0.16
CTDNEP1-205ENST00000570828 RIC1Q4ADV7 1423 aa16.08■□□□□ 0.16
CTDNEP1-205ENST00000570828 NTSR2O95665 410 aa16.07■□□□□ 0.16
CTDNEP1-205ENST00000570828 HSP90AB3PQ58FF7 597 aa16.07■□□□□ 0.16
CTDNEP1-205ENST00000570828 DPY19L2Q6NUT2 758 aa16.07■□□□□ 0.16
CTDNEP1-205ENST00000570828 COPS6Q7L5N1 327 aa16.07■□□□□ 0.16
CTDNEP1-205ENST00000570828 C7orf43Q8WVR3 580 aa16.07■□□□□ 0.16
CTDNEP1-205ENST00000570828 MBIPQ9NS73 344 aa16.07■□□□□ 0.16
CTDNEP1-205ENST00000570828 CHPF2Q9P2E5 772 aa16.07■□□□□ 0.16
CTDNEP1-205ENST00000570828 TNRC6CQ9HCJ0 1690 aaKnown RBP16.07■□□□□ 0.16
CTDNEP1-205ENST00000570828 TIAM2Q8IVF5 1701 aa16.07■□□□□ 0.16
CTDNEP1-205ENST00000570828 SBF1O95248 1867 aa16.07■□□□□ 0.16
CTDNEP1-205ENST00000570828 SLX4Q8IY92 1834 aa16.06■□□□□ 0.16
CTDNEP1-205ENST00000570828 ARFGEF2Q9Y6D5 1785 aa16.06■□□□□ 0.16
CTDNEP1-205ENST00000570828 RTKN2Q8IZC4 609 aa16.06■□□□□ 0.16
CTDNEP1-205ENST00000570828 MIER1Q8N108 512 aa16.06■□□□□ 0.16
CTDNEP1-205ENST00000570828 UTP14AQ9BVJ6 771 aaKnown RBP16.06■□□□□ 0.16
CTDNEP1-205ENST00000570828 IFT57Q9NWB7 429 aa16.06■□□□□ 0.16
CTDNEP1-205ENST00000570828 RNF123Q5XPI4 1314 aa16.05■□□□□ 0.16
CTDNEP1-205ENST00000570828 ZNF316A6NFI3 1004 aaPredicted RBP16.05■□□□□ 0.16
CTDNEP1-205ENST00000570828 VEGFAP15692 232 aaPredicted RBP16.05■□□□□ 0.16
CTDNEP1-205ENST00000570828 GNAI1P63096 354 aa16.05■□□□□ 0.16
CTDNEP1-205ENST00000570828 FKBP4Q02790 459 aaKnown RBP eCLIP16.05■□□□□ 0.16
CTDNEP1-205ENST00000570828 DUSP27Q5VZP5 1158 aa16.05■□□□□ 0.16
CTDNEP1-205ENST00000570828 DBF4Q9UBU7 674 aaPredicted RBP16.05■□□□□ 0.16
CTDNEP1-205ENST00000570828 FER1L6Q2WGJ9 1857 aa16.04■□□□□ 0.16
CTDNEP1-205ENST00000570828 NUP98P52948 1817 aa16.04■□□□□ 0.16
CTDNEP1-205ENST00000570828 APLP1P51693 650 aa16.04■□□□□ 0.16
CTDNEP1-205ENST00000570828 FSTL1Q12841 308 aa16.04■□□□□ 0.16
CTDNEP1-205ENST00000570828 OLFM4Q6UX06 510 aa16.04■□□□□ 0.16
CTDNEP1-205ENST00000570828 ANP32CO43423 234 aa16.03■□□□□ 0.16
CTDNEP1-205ENST00000570828 ZNF853P0CG23 659 aa16.03■□□□□ 0.16
CTDNEP1-205ENST00000570828 HOXA10P31260 410 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms