RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 USP42Q9H9J4 1324 aaKnown RBP18.22■□□□□ 0.51
SMG6-207ENST00000570756 CDC37L1Q7L3B6 337 aa18.22■□□□□ 0.51
SMG6-207ENST00000570756 CREBRFQ8IUR6 639 aa18.22■□□□□ 0.51
SMG6-207ENST00000570756 ST3GAL1Q11201 340 aa18.21■□□□□ 0.51
SMG6-207ENST00000570756 NAA30Q147X3 362 aaPredicted RBP18.21■□□□□ 0.51
SMG6-207ENST00000570756 PTPN14Q15678 1187 aa18.21■□□□□ 0.51
SMG6-207ENST00000570756 ADCK5Q3MIX3 580 aa18.21■□□□□ 0.51
SMG6-207ENST00000570756 HSP90AB2PQ58FF8 381 aa18.21■□□□□ 0.51
SMG6-207ENST00000570756 GOLGA6L19H0YKK7 550 aa18.21■□□□□ 0.51
SMG6-207ENST00000570756 RBM6P78332 1123 aaKnown RBP18.21■□□□□ 0.51
SMG6-207ENST00000570756 SLFNL1Q499Z3 407 aa18.21■□□□□ 0.51
SMG6-207ENST00000570756 FERMT3Q86UX7 667 aa18.21■□□□□ 0.51
SMG6-207ENST00000570756 ANKLE2Q86XL3 938 aa18.21■□□□□ 0.51
SMG6-207ENST00000570756 ERO1AQ96HE7 468 aa18.21■□□□□ 0.51
SMG6-207ENST00000570756 FOXO3O43524 673 aa18.2■□□□□ 0.5
SMG6-207ENST00000570756 GTF2E1P29083 439 aaPredicted RBP18.2■□□□□ 0.5
SMG6-207ENST00000570756 SARM1Q6SZW1 724 aa18.2■□□□□ 0.5
SMG6-207ENST00000570756 LRRC8AQ8IWT6 810 aa18.2■□□□□ 0.5
SMG6-207ENST00000570756 NECAB1Q8N987 351 aa18.2■□□□□ 0.5
SMG6-207ENST00000570756 SRGAP3O43295 1099 aa18.2■□□□□ 0.5
SMG6-207ENST00000570756 HTATSF1O43719 755 aaKnown RBP18.2■□□□□ 0.5
SMG6-207ENST00000570756 PSMA5P28066 241 aa18.2■□□□□ 0.5
SMG6-207ENST00000570756 ANKRD1Q15327 319 aa18.2■□□□□ 0.5
SMG6-207ENST00000570756 RNF20Q5VTR2 975 aa18.2■□□□□ 0.5
SMG6-207ENST00000570756 METP08581 1390 aa18.19■□□□□ 0.5
SMG6-207ENST00000570756 MAP3K19Q56UN5 1328 aa18.19■□□□□ 0.5
SMG6-207ENST00000570756 PTH1RQ03431 593 aa18.19■□□□□ 0.5
SMG6-207ENST00000570756 KMT5BQ4FZB7 885 aa18.19■□□□□ 0.5
SMG6-207ENST00000570756 MRFAP1L1Q96HT8 127 aa18.19■□□□□ 0.5
SMG6-207ENST00000570756 DNAJC25Q9H1X3 360 aa18.19■□□□□ 0.5
SMG6-207ENST00000570756 OVOS2A0A0J9YW53 1432 aa18.19■□□□□ 0.5
SMG6-207ENST00000570756 OVOS2Q6IE36 1432 aa18.19■□□□□ 0.5
SMG6-207ENST00000570756 KIF2AO00139 706 aaPredicted RBP18.19■□□□□ 0.5
SMG6-207ENST00000570756 BICD2Q8TD16 824 aa18.19■□□□□ 0.5
SMG6-207ENST00000570756 LEO1Q8WVC0 666 aaPredicted RBP18.19■□□□□ 0.5
SMG6-207ENST00000570756 TMEM51Q9NW97 253 aa18.19■□□□□ 0.5
SMG6-207ENST00000570756 TPCN1Q9ULQ1 816 aa18.19■□□□□ 0.5
SMG6-207ENST00000570756 PEAK1Q9H792 1746 aa18.18■□□□□ 0.5
SMG6-207ENST00000570756 HDGFP51858 240 aaKnown RBP18.18■□□□□ 0.5
SMG6-207ENST00000570756 CCDC144BQ3MJ40 725 aa18.18■□□□□ 0.5
SMG6-207ENST00000570756 NYAP1Q6ZVC0 841 aa18.18■□□□□ 0.5
SMG6-207ENST00000570756 CCDC144CPQ8IYA2 1237 aa18.18■□□□□ 0.5
SMG6-207ENST00000570756 GPATCH3Q96I76 525 aa18.18■□□□□ 0.5
SMG6-207ENST00000570756 ZNF215Q9UL58 517 aaPredicted RBP18.18■□□□□ 0.5
SMG6-207ENST00000570756 CDK11BP21127 795 aaKnown RBP18.18■□□□□ 0.5
SMG6-207ENST00000570756 NECTIN1Q15223 517 aa18.18■□□□□ 0.5
SMG6-207ENST00000570756 TIGD1Q96MW7 591 aa18.18■□□□□ 0.5
SMG6-207ENST00000570756 FAM53CQ9NYF3 392 aa18.18■□□□□ 0.5
SMG6-207ENST00000570756 ADAMTS13Q76LX8 1427 aa18.17■□□□□ 0.5
SMG6-207ENST00000570756 NECTIN2Q92692 538 aa18.17■□□□□ 0.5
SMG6-207ENST00000570756 PLEKHG1Q9ULL1 1385 aa18.17■□□□□ 0.5
SMG6-207ENST00000570756 KCNJ4P48050 445 aa18.17■□□□□ 0.5
SMG6-207ENST00000570756 FAM173BQ6P4H8 233 aa18.17■□□□□ 0.5
SMG6-207ENST00000570756 NALCNQ8IZF0 1738 aa18.16■□□□□ 0.5
SMG6-207ENST00000570756 KDRP35968 1356 aa18.16■□□□□ 0.5
SMG6-207ENST00000570756 NR1I2O75469 434 aa18.16■□□□□ 0.5
SMG6-207ENST00000570756 SKILP12757 684 aa18.16■□□□□ 0.5
SMG6-207ENST00000570756 CALCOCO1Q9P1Z2 691 aa18.16■□□□□ 0.5
SMG6-207ENST00000570756 LRRC37A3O60309 1634 aa18.16■□□□□ 0.5
SMG6-207ENST00000570756 DTNBO60941 627 aa18.15■□□□□ 0.5
SMG6-207ENST00000570756 SLU7O95391 586 aaKnown RBP18.15■□□□□ 0.5
SMG6-207ENST00000570756 CREB3L3Q68CJ9 461 aa18.15■□□□□ 0.5
SMG6-207ENST00000570756 SIRT1Q96EB6 747 aa18.15■□□□□ 0.5
SMG6-207ENST00000570756 TFIP11Q9UBB9 837 aaKnown RBP18.15■□□□□ 0.5
SMG6-207ENST00000570756 HIP1O00291 1037 aa18.15■□□□□ 0.5
SMG6-207ENST00000570756 GIGYF1O75420 1035 aaPredicted RBP18.15■□□□□ 0.5
SMG6-207ENST00000570756 OS9Q13438 667 aaPredicted RBP18.15■□□□□ 0.5
SMG6-207ENST00000570756 FBXO38Q6PIJ6 1188 aa18.15■□□□□ 0.5
SMG6-207ENST00000570756 CLASRPQ8N2M8 674 aaKnown RBP18.15■□□□□ 0.5
SMG6-207ENST00000570756 RBM8AQ9Y5S9 174 aaKnown RBP18.15■□□□□ 0.5
SMG6-207ENST00000570756 USP31Q70CQ4 1352 aa18.15■□□□□ 0.5
SMG6-207ENST00000570756 CTAGE5O15320 804 aa18.14■□□□□ 0.5
SMG6-207ENST00000570756 EVI5LQ96CN4 794 aa18.14■□□□□ 0.5
SMG6-207ENST00000570756 KCND1Q9NSA2 647 aa18.14■□□□□ 0.5
SMG6-207ENST00000570756 ECHDC1Q9NTX5 307 aa18.14■□□□□ 0.5
SMG6-207ENST00000570756 BABAM1Q9NWV8 329 aa18.14■□□□□ 0.5
SMG6-207ENST00000570756 FMN2Q9NZ56 1722 aa18.14■□□□□ 0.49
SMG6-207ENST00000570756 IQCB1Q15051 598 aa18.13■□□□□ 0.49
SMG6-207ENST00000570756 ELF2Q15723 593 aa18.13■□□□□ 0.49
SMG6-207ENST00000570756 STX1AQ16623 288 aa18.13■□□□□ 0.49
SMG6-207ENST00000570756 BLOC1S2Q6QNY1 142 aa18.13■□□□□ 0.49
SMG6-207ENST00000570756 ALDH8A1Q9H2A2 487 aaPredicted RBP18.13■□□□□ 0.49
SMG6-207ENST00000570756 USP27XA6NNY8 438 aa18.13■□□□□ 0.49
SMG6-207ENST00000570756 LARP1Q6PKG0 1096 aaKnown RBP18.13■□□□□ 0.49
SMG6-207ENST00000570756 RBM33Q96EV2 1170 aaKnown RBP18.13■□□□□ 0.49
SMG6-207ENST00000570756 CCDC69A6NI79 296 aa18.12■□□□□ 0.49
SMG6-207ENST00000570756 BMS1Q14692 1282 aaKnown RBP18.12■□□□□ 0.49
SMG6-207ENST00000570756 CCAR2Q8N163 923 aaKnown RBP18.12■□□□□ 0.49
SMG6-207ENST00000570756 MAP4K1Q92918 833 aa18.12■□□□□ 0.49
SMG6-207ENST00000570756 CFAP45Q9UL16 551 aa18.12■□□□□ 0.49
SMG6-207ENST00000570756 PRR36Q9H6K5 1346 aa18.12■□□□□ 0.49
SMG6-207ENST00000570756 GNAT3A8MTJ3 354 aa18.12■□□□□ 0.49
SMG6-207ENST00000570756 BECN2A8MW95 431 aa18.12■□□□□ 0.49
SMG6-207ENST00000570756 HDGFL1Q5TGJ6 251 aa18.12■□□□□ 0.49
SMG6-207ENST00000570756 PGBD1Q96JS3 809 aa18.12■□□□□ 0.49
SMG6-207ENST00000570756 TECPR2O15040 1411 aa18.12■□□□□ 0.49
SMG6-207ENST00000570756 GSDMDP57764 484 aa18.11■□□□□ 0.49
SMG6-207ENST00000570756 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.11■□□□□ 0.49
SMG6-207ENST00000570756 V9GYY5 206 aaPredicted RBP18.11■□□□□ 0.49
SMG6-207ENST00000570756 FLT4P35916 1363 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms