RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 ZNF790Q6PG37 636 aa12.79□□□□□ -0.36
GDE1-205ENST00000569899 KRI1Q8N9T8 703 aaKnown RBP12.79□□□□□ -0.36
GDE1-205ENST00000569899 EXOC6Q8TAG9 804 aa12.79□□□□□ -0.36
GDE1-205ENST00000569899 SBF2Q86WG5 1849 aa12.78□□□□□ -0.36
GDE1-205ENST00000569899 PSEN2P49810 448 aa12.78□□□□□ -0.36
GDE1-205ENST00000569899 NHSQ6T4R5 1651 aa12.78□□□□□ -0.36
GDE1-205ENST00000569899 SOS1Q07889 1333 aaPredicted RBP12.77□□□□□ -0.36
GDE1-205ENST00000569899 A0A0G2JS52 829 aa12.77□□□□□ -0.36
GDE1-205ENST00000569899 BRPF1P55201 1214 aaPredicted RBP12.77□□□□□ -0.36
GDE1-205ENST00000569899 MYT1Q01538 1121 aa12.77□□□□□ -0.36
GDE1-205ENST00000569899 ZKSCAN2Q63HK3 967 aa12.77□□□□□ -0.36
GDE1-205ENST00000569899 MARCH10Q8NA82 808 aaPredicted RBP12.77□□□□□ -0.36
GDE1-205ENST00000569899 PANK1Q8TE04 598 aa12.77□□□□□ -0.36
GDE1-205ENST00000569899 FBXO41Q8TF61 875 aa12.77□□□□□ -0.36
GDE1-205ENST00000569899 NECTIN2Q92692 538 aa12.77□□□□□ -0.36
GDE1-205ENST00000569899 GJD4Q96KN9 370 aaPredicted RBP12.77□□□□□ -0.36
GDE1-205ENST00000569899 TRPC5Q9UL62 973 aaPredicted RBP12.77□□□□□ -0.36
GDE1-205ENST00000569899 NOB1Q9ULX3 412 aaKnown RBP12.77□□□□□ -0.36
GDE1-205ENST00000569899 TJP1Q07157 1748 aa12.77□□□□□ -0.37
GDE1-205ENST00000569899 BCL9O00512 1426 aa12.77□□□□□ -0.37
GDE1-205ENST00000569899 PRAMEF22A3QJZ6 481 aa12.77□□□□□ -0.37
GDE1-205ENST00000569899 ARHGAP33O14559 1287 aa12.77□□□□□ -0.37
GDE1-205ENST00000569899 RLBP1P12271 317 aa12.77□□□□□ -0.37
GDE1-205ENST00000569899 TRIM27P14373 513 aa12.77□□□□□ -0.37
GDE1-205ENST00000569899 MAP2K5Q13163 448 aa12.77□□□□□ -0.37
GDE1-205ENST00000569899 TTC5Q8N0Z6 440 aa12.77□□□□□ -0.37
GDE1-205ENST00000569899 CLUAP1Q96AJ1 413 aa12.77□□□□□ -0.37
GDE1-205ENST00000569899 TMOD3Q9NYL9 352 aa12.77□□□□□ -0.37
GDE1-205ENST00000569899 RGS12O14924 1447 aa12.76□□□□□ -0.37
GDE1-205ENST00000569899 HOXB7P09629 217 aa12.76□□□□□ -0.37
GDE1-205ENST00000569899 PRSS12P56730 875 aa12.76□□□□□ -0.37
GDE1-205ENST00000569899 PDE3AQ14432 1141 aa12.76□□□□□ -0.37
GDE1-205ENST00000569899 HDGFL1Q5TGJ6 251 aa12.76□□□□□ -0.37
GDE1-205ENST00000569899 ERICH6BQ5W0A0 696 aa12.76□□□□□ -0.37
GDE1-205ENST00000569899 PADI6Q6TGC4 694 aa12.76□□□□□ -0.37
GDE1-205ENST00000569899 ATF7IPQ6VMQ6 1270 aa12.76□□□□□ -0.37
GDE1-205ENST00000569899 ZNF496Q96IT1 587 aaPredicted RBP12.76□□□□□ -0.37
GDE1-205ENST00000569899 BTAF1O14981 1849 aa12.76□□□□□ -0.37
GDE1-205ENST00000569899 GIGYF1O75420 1035 aaPredicted RBP12.75□□□□□ -0.37
GDE1-205ENST00000569899 EIF2S2P20042 333 aaKnown RBP12.74□□□□□ -0.37
GDE1-205ENST00000569899 CCDC30Q5VVM6 783 aa12.74□□□□□ -0.37
GDE1-205ENST00000569899 FTSJ3Q8IY81 847 aaKnown RBP12.74□□□□□ -0.37
GDE1-205ENST00000569899 PIGBQ92521 554 aa12.74□□□□□ -0.37
GDE1-205ENST00000569899 STK31Q9BXU1 1019 aa12.74□□□□□ -0.37
GDE1-205ENST00000569899 COG6Q9Y2V7 657 aa12.74□□□□□ -0.37
GDE1-205ENST00000569899 CICQ96RK0 1608 aaPredicted RBP12.74□□□□□ -0.37
GDE1-205ENST00000569899 PBX2P40425 430 aa12.73□□□□□ -0.37
GDE1-205ENST00000569899 G2E3Q7L622 706 aa12.73□□□□□ -0.37
GDE1-205ENST00000569899 DZIP1LQ8IYY4 767 aaKnown RBP12.73□□□□□ -0.37
GDE1-205ENST00000569899 TTC13Q8NBP0 860 aa12.73□□□□□ -0.37
GDE1-205ENST00000569899 SYTL4Q96C24 671 aaPredicted RBP12.73□□□□□ -0.37
GDE1-205ENST00000569899 ACSBG1Q96GR2 724 aa12.73□□□□□ -0.37
GDE1-205ENST00000569899 FMNL2Q96PY5 1086 aa12.73□□□□□ -0.37
GDE1-205ENST00000569899 QTRT2Q9H974 415 aaKnown RBP12.73□□□□□ -0.37
GDE1-205ENST00000569899 RBM27Q9P2N5 1060 aaKnown RBP12.73□□□□□ -0.37
GDE1-205ENST00000569899 IRF6O14896 467 aa12.73□□□□□ -0.37
GDE1-205ENST00000569899 IPO8O15397 1037 aaKnown RBP12.73□□□□□ -0.37
GDE1-205ENST00000569899 PPP4R2Q9NY27 417 aa12.73□□□□□ -0.37
GDE1-205ENST00000569899 CHPF2Q9P2E5 772 aa12.73□□□□□ -0.37
GDE1-205ENST00000569899 FAM198AQ9UFP1 575 aa12.73□□□□□ -0.37
GDE1-205ENST00000569899 ABCC4O15439 1325 aa12.72□□□□□ -0.37
GDE1-205ENST00000569899 DMRTA1Q5VZB9 504 aa12.72□□□□□ -0.37
GDE1-205ENST00000569899 ARHGAP45Q92619 1136 aa12.72□□□□□ -0.37
GDE1-205ENST00000569899 ASAP1Q9ULH1 1129 aa12.72□□□□□ -0.37
GDE1-205ENST00000569899 ARFGEF2Q9Y6D5 1785 aa12.71□□□□□ -0.37
GDE1-205ENST00000569899 COL5A3P25940 1745 aaPredicted RBP12.71□□□□□ -0.37
GDE1-205ENST00000569899 ANXA1P04083 346 aa12.71□□□□□ -0.37
GDE1-205ENST00000569899 PROX2Q3B8N5 592 aa12.71□□□□□ -0.37
GDE1-205ENST00000569899 TMEM57Q8N5G2 664 aa12.71□□□□□ -0.37
GDE1-205ENST00000569899 AK7Q96M32 723 aa12.71□□□□□ -0.37
GDE1-205ENST00000569899 ZBED2Q9BTP6 218 aa12.71□□□□□ -0.37
GDE1-205ENST00000569899 ATG3Q9NT62 314 aa12.71□□□□□ -0.37
GDE1-205ENST00000569899 PTPRCP08575 1304 aa12.71□□□□□ -0.38
GDE1-205ENST00000569899 PTCD1O75127 700 aaKnown RBP12.7□□□□□ -0.38
GDE1-205ENST00000569899 SNRPA1P09661 255 aaKnown RBP12.7□□□□□ -0.38
GDE1-205ENST00000569899 MS4A1P11836 297 aa12.7□□□□□ -0.38
GDE1-205ENST00000569899 FLIIQ13045 1269 aa12.7□□□□□ -0.38
GDE1-205ENST00000569899 MVPQ14764 893 aaKnown RBP12.7□□□□□ -0.38
GDE1-205ENST00000569899 PROSER3Q2NL68 480 aa12.7□□□□□ -0.38
GDE1-205ENST00000569899 B4GALNT3Q6L9W6 998 aa12.7□□□□□ -0.38
GDE1-205ENST00000569899 SEPT12Q8IYM1 358 aa12.7□□□□□ -0.38
GDE1-205ENST00000569899 CCDC102AQ96A19 550 aa12.7□□□□□ -0.38
GDE1-205ENST00000569899 API5Q9BZZ5 524 aaKnown RBP12.7□□□□□ -0.38
GDE1-205ENST00000569899 TSKSQ9UJT2 592 aa12.7□□□□□ -0.38
GDE1-205ENST00000569899 NUP188Q5SRE5 1749 aa12.7□□□□□ -0.38
GDE1-205ENST00000569899 PXDNLA1KZ92 1463 aa12.7□□□□□ -0.38
GDE1-205ENST00000569899 ONECUT3O60422 494 aaPredicted RBP12.7□□□□□ -0.38
GDE1-205ENST00000569899 FAM161AQ3B820 660 aa12.7□□□□□ -0.38
GDE1-205ENST00000569899 FAM182BQ5T319 152 aa12.7□□□□□ -0.38
GDE1-205ENST00000569899 ITPRIPQ8IWB1 547 aa12.7□□□□□ -0.38
GDE1-205ENST00000569899 PHAXQ9H814 394 aaKnown RBP12.7□□□□□ -0.38
GDE1-205ENST00000569899 ZNF831Q5JPB2 1677 aa12.69□□□□□ -0.38
GDE1-205ENST00000569899 LY75O60449 1722 aa12.69□□□□□ -0.38
GDE1-205ENST00000569899 TRIM6-TRIM34B2RNG4 842 aa12.69□□□□□ -0.38
GDE1-205ENST00000569899 ZNF772Q68DY9 489 aaPredicted RBP12.69□□□□□ -0.38
GDE1-205ENST00000569899 USP16Q9Y5T5 823 aa12.69□□□□□ -0.38
GDE1-205ENST00000569899 RREB1Q92766 1687 aa12.69□□□□□ -0.38
GDE1-205ENST00000569899 AFDNP55196 1824 aaKnown RBP12.68□□□□□ -0.38
GDE1-205ENST00000569899 KCNQ2O43526 872 aa12.68□□□□□ -0.38
GDE1-205ENST00000569899 FKBP5Q13451 457 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms