RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 FRAT1Q92837 279 aaPredicted RBP16.58■□□□□ 0.24
CNOT1-217ENST00000569263 API5Q9BZZ5 524 aaKnown RBP16.58■□□□□ 0.24
CNOT1-217ENST00000569263 CWC25Q9NXE8 425 aaPredicted RBP16.58■□□□□ 0.24
CNOT1-217ENST00000569263 TRMT112Q9UI30 125 aaKnown RBP16.58■□□□□ 0.24
CNOT1-217ENST00000569263 RNF123Q5XPI4 1314 aa16.58■□□□□ 0.24
CNOT1-217ENST00000569263 KIAA1551Q9HCM1 1747 aa16.58■□□□□ 0.24
CNOT1-217ENST00000569263 TNRC6CQ9HCJ0 1690 aaKnown RBP16.57■□□□□ 0.24
CNOT1-217ENST00000569263 IPO8O15397 1037 aaKnown RBP16.57■□□□□ 0.24
CNOT1-217ENST00000569263 TRIM28Q13263 835 aaKnown RBP16.57■□□□□ 0.24
CNOT1-217ENST00000569263 NUTM1Q86Y26 1132 aa16.57■□□□□ 0.24
CNOT1-217ENST00000569263 LINS1Q8NG48 757 aa16.57■□□□□ 0.24
CNOT1-217ENST00000569263 RCAN3Q9UKA8 241 aa16.57■□□□□ 0.24
CNOT1-217ENST00000569263 DLEC1Q9Y238 1755 aa16.56■□□□□ 0.24
CNOT1-217ENST00000569263 COL11A2P13942 1736 aaPredicted RBP16.56■□□□□ 0.24
CNOT1-217ENST00000569263 DDX60Q8IY21 1712 aaKnown RBP16.56■□□□□ 0.24
CNOT1-217ENST00000569263 ABCC12Q96J65 1359 aa16.56■□□□□ 0.24
CNOT1-217ENST00000569263 SH3TC1Q8TE82 1336 aa16.56■□□□□ 0.24
CNOT1-217ENST00000569263 NEURL1BA8MQ27 555 aa16.56■□□□□ 0.24
CNOT1-217ENST00000569263 IGKV5-2P06315 115 aa16.56■□□□□ 0.24
CNOT1-217ENST00000569263 CWF19L2Q2TBE0 894 aaKnown RBP16.56■□□□□ 0.24
CNOT1-217ENST00000569263 ERFEQ4G0M1 354 aa16.56■□□□□ 0.24
CNOT1-217ENST00000569263 SYT17Q9BSW7 474 aa16.56■□□□□ 0.24
CNOT1-217ENST00000569263 PDE6BP35913 854 aa16.55■□□□□ 0.24
CNOT1-217ENST00000569263 BRIP1Q9BX63 1249 aa16.55■□□□□ 0.24
CNOT1-217ENST00000569263 SRCIN1Q9C0H9 1055 aa16.55■□□□□ 0.24
CNOT1-217ENST00000569263 CACNA1SQ13698 1873 aa16.54■□□□□ 0.24
CNOT1-217ENST00000569263 RIC1Q4ADV7 1423 aa16.54■□□□□ 0.24
CNOT1-217ENST00000569263 TGFB2P61812 414 aa16.54■□□□□ 0.24
CNOT1-217ENST00000569263 RTL5Q5HYW3 569 aaPredicted RBP16.54■□□□□ 0.24
CNOT1-217ENST00000569263 BEND3Q5T5X7 828 aa16.54■□□□□ 0.24
CNOT1-217ENST00000569263 ZKSCAN2Q63HK3 967 aa16.54■□□□□ 0.24
CNOT1-217ENST00000569263 NLGN2Q8NFZ4 835 aa16.54■□□□□ 0.24
CNOT1-217ENST00000569263 ARHGAP45Q92619 1136 aa16.54■□□□□ 0.24
CNOT1-217ENST00000569263 MYH3P11055 1940 aa16.53■□□□□ 0.24
CNOT1-217ENST00000569263 BRCA1P38398 1863 aaKnown RBP16.53■□□□□ 0.24
CNOT1-217ENST00000569263 GCKRQ14397 625 aa16.53■□□□□ 0.24
CNOT1-217ENST00000569263 ATF7IPQ6VMQ6 1270 aa16.53■□□□□ 0.24
CNOT1-217ENST00000569263 ZBTB38Q8NAP3 1195 aaPredicted RBP16.53■□□□□ 0.24
CNOT1-217ENST00000569263 FAM89AQ96GI7 184 aa16.53■□□□□ 0.24
CNOT1-217ENST00000569263 H0YIN7 160 aa16.52■□□□□ 0.24
CNOT1-217ENST00000569263 ALDH1L1O75891 902 aa16.52■□□□□ 0.24
CNOT1-217ENST00000569263 PCCAP05165 728 aaPredicted RBP16.52■□□□□ 0.24
CNOT1-217ENST00000569263 TRIM27P14373 513 aa16.52■□□□□ 0.24
CNOT1-217ENST00000569263 C2CD5Q86YS7 1000 aa16.52■□□□□ 0.24
CNOT1-217ENST00000569263 PDZRN3Q9UPQ7 1066 aa16.52■□□□□ 0.24
CNOT1-217ENST00000569263 IRS4O14654 1257 aaPredicted RBP16.51■□□□□ 0.23
CNOT1-217ENST00000569263 HSP90B1P14625 803 aaKnown RBP16.51■□□□□ 0.23
CNOT1-217ENST00000569263 DPEP1P16444 411 aa16.51■□□□□ 0.23
CNOT1-217ENST00000569263 CHRNA5P30532 468 aa16.51■□□□□ 0.23
CNOT1-217ENST00000569263 CCT4P50991 539 aaKnown RBP16.51■□□□□ 0.23
CNOT1-217ENST00000569263 FTSJ3Q8IY81 847 aaKnown RBP16.51■□□□□ 0.23
CNOT1-217ENST00000569263 SYNE4Q8N205 404 aa16.51■□□□□ 0.23
CNOT1-217ENST00000569263 C9orf78Q9NZ63 289 aaPredicted RBP16.51■□□□□ 0.23
CNOT1-217ENST00000569263 ABCC4O15439 1325 aa16.5■□□□□ 0.23
CNOT1-217ENST00000569263 A0A0G2JLW4 131 aa16.5■□□□□ 0.23
CNOT1-217ENST00000569263 HCLS1P14317 486 aaPredicted RBP16.5■□□□□ 0.23
CNOT1-217ENST00000569263 UBE3BQ7Z3V4 1068 aa16.5■□□□□ 0.23
CNOT1-217ENST00000569263 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.5■□□□□ 0.23
CNOT1-217ENST00000569263 JARID2Q92833 1246 aaPredicted RBP16.5■□□□□ 0.23
CNOT1-217ENST00000569263 CLUAP1Q96AJ1 413 aa16.5■□□□□ 0.23
CNOT1-217ENST00000569263 NLRP3Q96P20 1036 aa16.5■□□□□ 0.23
CNOT1-217ENST00000569263 CDHR2Q9BYE9 1310 aa16.49■□□□□ 0.23
CNOT1-217ENST00000569263 GRM8O00222 908 aa16.49■□□□□ 0.23
CNOT1-217ENST00000569263 SLC10A5Q5PT55 438 aa16.49■□□□□ 0.23
CNOT1-217ENST00000569263 RPGRQ92834 1020 aaKnown RBP16.49■□□□□ 0.23
CNOT1-217ENST00000569263 MS4A1P11836 297 aa16.48■□□□□ 0.23
CNOT1-217ENST00000569263 DZIP1LQ8IYY4 767 aaKnown RBP16.48■□□□□ 0.23
CNOT1-217ENST00000569263 PELP1Q8IZL8 1130 aaKnown RBP16.48■□□□□ 0.23
CNOT1-217ENST00000569263 ZNF622Q969S3 477 aaKnown RBP eCLIP16.48■□□□□ 0.233e-9■□□□□ 9
CNOT1-217ENST00000569263 WWC3Q9ULE0 1092 aa16.48■□□□□ 0.23
CNOT1-217ENST00000569263 TNNQ9UQP3 1299 aa16.48■□□□□ 0.23
CNOT1-217ENST00000569263 H7C1W4 665 aa16.47■□□□□ 0.23
CNOT1-217ENST00000569263 NPR1P16066 1061 aa16.47■□□□□ 0.23
CNOT1-217ENST00000569263 MASTLQ96GX5 879 aa16.47■□□□□ 0.23
CNOT1-217ENST00000569263 PIM2Q9P1W9 311 aa16.47■□□□□ 0.23
CNOT1-217ENST00000569263 ARFGEF1Q9Y6D6 1849 aa16.47■□□□□ 0.23
CNOT1-217ENST00000569263 KLRG2A4D1S0 409 aaPredicted RBP16.46■□□□□ 0.23
CNOT1-217ENST00000569263 PDE8AO60658 829 aa16.46■□□□□ 0.23
CNOT1-217ENST00000569263 SRGNP10124 158 aa16.46■□□□□ 0.23
CNOT1-217ENST00000569263 CRY2Q49AN0 593 aa16.46■□□□□ 0.23
CNOT1-217ENST00000569263 INTS3Q68E01 1043 aaKnown RBP16.46■□□□□ 0.23
CNOT1-217ENST00000569263 STYK1Q6J9G0 422 aa16.46■□□□□ 0.23
CNOT1-217ENST00000569263 C3orf67Q6ZVT6 689 aa16.46■□□□□ 0.23
CNOT1-217ENST00000569263 SRCAPQ6ZRS2 3230 aa16.46■□□□□ 0.23
CNOT1-217ENST00000569263 DCAF8L1A6NGE4 600 aa16.45■□□□□ 0.22
CNOT1-217ENST00000569263 KCNA3P22001 575 aa16.45■□□□□ 0.22
CNOT1-217ENST00000569263 DALRD3Q5D0E6 543 aaKnown RBP16.45■□□□□ 0.22
CNOT1-217ENST00000569263 TMEM57Q8N5G2 664 aa16.45■□□□□ 0.22
CNOT1-217ENST00000569263 RBM17Q96I25 401 aaKnown RBP16.45■□□□□ 0.22
CNOT1-217ENST00000569263 BCS1LQ9Y276 419 aa16.45■□□□□ 0.22
CNOT1-217ENST00000569263 PLIN1O60240 522 aa16.44■□□□□ 0.22
CNOT1-217ENST00000569263 CASP7P55210 303 aa16.44■□□□□ 0.22
CNOT1-217ENST00000569263 CTSWP56202 376 aa16.44■□□□□ 0.22
CNOT1-217ENST00000569263 TTLL6Q8N841 843 aa16.44■□□□□ 0.22
CNOT1-217ENST00000569263 CNKSR1Q969H4 720 aa16.44■□□□□ 0.22
CNOT1-217ENST00000569263 TAF1P21675 1872 aa16.44■□□□□ 0.22
CNOT1-217ENST00000569263 SLX4Q8IY92 1834 aa16.43■□□□□ 0.22
CNOT1-217ENST00000569263 SPEF2Q9C093 1822 aa16.43■□□□□ 0.22
CNOT1-217ENST00000569263 NBPF7P0C2Y1 421 aaPredicted RBP16.43■□□□□ 0.22
CNOT1-217ENST00000569263 UBTFL1P0CB47 393 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms