RNA–Protein interactions for RNA: ENST00000568837.1

IFT140-209, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-209ENST00000568837 GLTPD2A6NH11 291 aa11.77□□□□□ -0.53
IFT140-209ENST00000568837 TCERG1O14776 1098 aaKnown RBP11.77□□□□□ -0.53
IFT140-209ENST00000568837 TOMM70O94826 608 aa11.77□□□□□ -0.53
IFT140-209ENST00000568837 HSPA6P17066 643 aa11.77□□□□□ -0.53
IFT140-209ENST00000568837 HOXA10P31260 410 aaPredicted RBP11.77□□□□□ -0.53
IFT140-209ENST00000568837 CALD1Q05682 793 aaKnown RBP11.77□□□□□ -0.53
IFT140-209ENST00000568837 TCIRG1Q13488 830 aa11.77□□□□□ -0.53
IFT140-209ENST00000568837 SOGA3Q5TF21 947 aa11.77□□□□□ -0.53
IFT140-209ENST00000568837 PPP1R42Q7Z4L9 355 aa11.77□□□□□ -0.53
IFT140-209ENST00000568837 WWC1Q8IX03 1113 aa11.77□□□□□ -0.53
IFT140-209ENST00000568837 RPGRQ92834 1020 aaKnown RBP11.77□□□□□ -0.53
IFT140-209ENST00000568837 PHAXQ9H814 394 aaKnown RBP11.77□□□□□ -0.53
IFT140-209ENST00000568837 ZNF277Q9NRM2 450 aaPredicted RBP11.77□□□□□ -0.53
IFT140-209ENST00000568837 ZC3H4Q9UPT8 1303 aaKnown RBP11.77□□□□□ -0.53
IFT140-209ENST00000568837 RIC1Q4ADV7 1423 aa11.77□□□□□ -0.53
IFT140-209ENST00000568837 SNED1Q8TER0 1413 aa11.77□□□□□ -0.53
IFT140-209ENST00000568837 POTECB2RU33 542 aa11.76□□□□□ -0.53
IFT140-209ENST00000568837 ATP5J2-PTCD1G3V325 749 aa11.76□□□□□ -0.53
IFT140-209ENST00000568837 SLC10A5Q5PT55 438 aa11.76□□□□□ -0.53
IFT140-209ENST00000568837 ANKRD13DQ6ZTN6 518 aa11.76□□□□□ -0.53
IFT140-209ENST00000568837 PLBD2Q8NHP8 589 aa11.76□□□□□ -0.53
IFT140-209ENST00000568837 TRMT112Q9UI30 125 aaKnown RBP11.76□□□□□ -0.53
IFT140-209ENST00000568837 SALL2Q9Y467 1007 aaPredicted RBP11.76□□□□□ -0.53
IFT140-209ENST00000568837 NUP98P52948 1817 aa11.75□□□□□ -0.53
IFT140-209ENST00000568837 SBF1O95248 1867 aa11.75□□□□□ -0.53
IFT140-209ENST00000568837 ALDH1B1P30837 517 aa11.75□□□□□ -0.53
IFT140-209ENST00000568837 FKBP4Q02790 459 aaKnown RBP eCLIP11.75□□□□□ -0.53
IFT140-209ENST00000568837 HSP90AB3PQ58FF7 597 aa11.75□□□□□ -0.53
IFT140-209ENST00000568837 HYPKQ9NX55 129 aa11.75□□□□□ -0.53
IFT140-209ENST00000568837 PPEF1O14829 653 aaPredicted RBP11.74□□□□□ -0.53
IFT140-209ENST00000568837 DDNO94850 711 aaPredicted RBP11.74□□□□□ -0.53
IFT140-209ENST00000568837 CCDC27Q2M243 656 aa11.74□□□□□ -0.53
IFT140-209ENST00000568837 RTL5Q5HYW3 569 aaPredicted RBP11.74□□□□□ -0.53
IFT140-209ENST00000568837 C16orf71Q8IYS4 520 aaPredicted RBP11.74□□□□□ -0.53
IFT140-209ENST00000568837 RTKN2Q8IZC4 609 aa11.74□□□□□ -0.53
IFT140-209ENST00000568837 RBM46Q8TBY0 533 aaKnown RBP11.74□□□□□ -0.53
IFT140-209ENST00000568837 RBM17Q96I25 401 aaKnown RBP11.74□□□□□ -0.53
IFT140-209ENST00000568837 NLRP3Q96P20 1036 aa11.74□□□□□ -0.53
IFT140-209ENST00000568837 CRAMP1Q96RY5 1269 aa11.74□□□□□ -0.53
IFT140-209ENST00000568837 ISCA1Q9BUE6 129 aa11.74□□□□□ -0.53
IFT140-209ENST00000568837 SH3TC1Q8TE82 1336 aa11.74□□□□□ -0.53
IFT140-209ENST00000568837 ZNF541Q9H0D2 1346 aa11.74□□□□□ -0.53
IFT140-209ENST00000568837 TIAM2Q8IVF5 1701 aa11.74□□□□□ -0.53
IFT140-209ENST00000568837 ABCC4O15439 1325 aa11.73□□□□□ -0.53
IFT140-209ENST00000568837 FER1L6Q2WGJ9 1857 aa11.73□□□□□ -0.53
IFT140-209ENST00000568837 FAM89AQ96GI7 184 aa11.73□□□□□ -0.53
IFT140-209ENST00000568837 ARFGEF2Q9Y6D5 1785 aa11.72□□□□□ -0.53
IFT140-209ENST00000568837 COL4A5P29400 1685 aa11.72□□□□□ -0.53
IFT140-209ENST00000568837 RNF123Q5XPI4 1314 aa11.72□□□□□ -0.53
IFT140-209ENST00000568837 VEGFAP15692 232 aaPredicted RBP11.72□□□□□ -0.53
IFT140-209ENST00000568837 IARSP41252 1262 aaKnown RBP11.72□□□□□ -0.53
IFT140-209ENST00000568837 HTRA3P83110 453 aa11.72□□□□□ -0.53
IFT140-209ENST00000568837 GOLGA2Q08379 1002 aa11.72□□□□□ -0.53
IFT140-209ENST00000568837 RIC3Q7Z5B4 369 aa11.72□□□□□ -0.53
IFT140-209ENST00000568837 FAM9BQ8IZU0 186 aa11.72□□□□□ -0.53
IFT140-209ENST00000568837 CACNA1SQ13698 1873 aa11.72□□□□□ -0.53
IFT140-209ENST00000568837 FANCIQ9NVI1 1328 aa11.71□□□□□ -0.53
IFT140-209ENST00000568837 POTEIP0CG38 1075 aa11.71□□□□□ -0.53
IFT140-209ENST00000568837 POTEJP0CG39 1038 aa11.71□□□□□ -0.53
IFT140-209ENST00000568837 DPY19L2Q6NUT2 758 aa11.71□□□□□ -0.53
IFT140-209ENST00000568837 JARID2Q92833 1246 aaPredicted RBP11.71□□□□□ -0.53
IFT140-209ENST00000568837 PSMD1Q99460 953 aa11.71□□□□□ -0.53
IFT140-209ENST00000568837 MYD88Q99836 296 aa11.71□□□□□ -0.53
IFT140-209ENST00000568837 SPINK5Q9NQ38 1064 aaPredicted RBP11.71□□□□□ -0.53
IFT140-209ENST00000568837 IL16Q14005 1332 aa11.7□□□□□ -0.54
IFT140-209ENST00000568837 FSTL1Q12841 308 aa11.7□□□□□ -0.54
IFT140-209ENST00000568837 TRIM28Q13263 835 aaKnown RBP11.7□□□□□ -0.54
IFT140-209ENST00000568837 TWISTNBQ3B726 338 aaPredicted RBP11.7□□□□□ -0.54
IFT140-209ENST00000568837 CCDC30Q5VVM6 783 aa11.7□□□□□ -0.54
IFT140-209ENST00000568837 CC2D2BQ6DHV5 1058 aa11.7□□□□□ -0.54
IFT140-209ENST00000568837 G2E3Q7L622 706 aa11.7□□□□□ -0.54
IFT140-209ENST00000568837 ATP6V0A2Q9Y487 856 aa11.7□□□□□ -0.54
IFT140-209ENST00000568837 COL4A1P02462 1669 aa11.69□□□□□ -0.54
IFT140-209ENST00000568837 FZD9O00144 591 aa11.69□□□□□ -0.54
IFT140-209ENST00000568837 DDX46Q7L014 1031 aaKnown RBP11.69□□□□□ -0.54
IFT140-209ENST00000568837 SMC1BQ8NDV3 1235 aa11.69□□□□□ -0.54
IFT140-209ENST00000568837 PI4KAP2A4QPH2 592 aa11.68□□□□□ -0.54
IFT140-209ENST00000568837 IRS4O14654 1257 aaPredicted RBP11.68□□□□□ -0.54
IFT140-209ENST00000568837 APLP1P51693 650 aa11.68□□□□□ -0.54
IFT140-209ENST00000568837 GRAPQ13588 217 aa11.68□□□□□ -0.54
IFT140-209ENST00000568837 AOC3Q16853 763 aa11.68□□□□□ -0.54
IFT140-209ENST00000568837 NCBP3Q53F19 620 aaKnown RBP11.68□□□□□ -0.54
IFT140-209ENST00000568837 LARGE2Q8N3Y3 721 aa11.68□□□□□ -0.54
IFT140-209ENST00000568837 PI4KAP1Q8N8J0 262 aa11.68□□□□□ -0.54
IFT140-209ENST00000568837 GRAPLQ8TC17 118 aaPredicted RBP11.68□□□□□ -0.54
IFT140-209ENST00000568837 CELF1Q92879 486 aaKnown RBP11.68□□□□□ -0.54
IFT140-209ENST00000568837 L3MBTL3Q96JM7 780 aaPredicted RBP11.68□□□□□ -0.54
IFT140-209ENST00000568837 METTL22Q9BUU2 404 aaPredicted RBP11.68□□□□□ -0.54
IFT140-209ENST00000568837 MAP3K2Q9Y2U5 619 aa11.68□□□□□ -0.54
IFT140-209ENST00000568837 ANKRD36CQ5JPF3 1778 aa11.68□□□□□ -0.54
IFT140-209ENST00000568837 WDR90Q96KV7 1748 aa11.68□□□□□ -0.54
IFT140-209ENST00000568837 BBOX1O75936 387 aa11.67□□□□□ -0.54
IFT140-209ENST00000568837 SLC4A2P04920 1241 aa11.67□□□□□ -0.54
IFT140-209ENST00000568837 IGKV5-2P06315 115 aa11.67□□□□□ -0.54
IFT140-209ENST00000568837 EXOSC9Q06265 439 aaKnown RBP11.67□□□□□ -0.54
IFT140-209ENST00000568837 SF3B3Q15393 1217 aaKnown RBP11.67□□□□□ -0.54
IFT140-209ENST00000568837 WDR63Q8IWG1 891 aa11.67□□□□□ -0.54
IFT140-209ENST00000568837 SP8Q8IXZ3 490 aa11.67□□□□□ -0.54
IFT140-209ENST00000568837 ZBTB38Q8NAP3 1195 aaPredicted RBP11.67□□□□□ -0.54
IFT140-209ENST00000568837 JDP2Q8WYK2 163 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms