RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 PNNQ9H307 717 aaKnown RBP20.85■□□□□ 0.93
HERPUD1-215ENST00000568676 RASSF10A6NK89 507 aa20.84■□□□□ 0.93
HERPUD1-215ENST00000568676 KDM3BQ7LBC6 1761 aa20.84■□□□□ 0.93
HERPUD1-215ENST00000568676 ABCC12Q96J65 1359 aa20.84■□□□□ 0.93
HERPUD1-215ENST00000568676 LMOD1P29536 600 aaPredicted RBP20.83■□□□□ 0.93
HERPUD1-215ENST00000568676 EIF4A1P60842 406 aaKnown RBP20.83■□□□□ 0.93
HERPUD1-215ENST00000568676 RBM17Q96I25 401 aaKnown RBP20.83■□□□□ 0.93
HERPUD1-215ENST00000568676 CRAMP1Q96RY5 1269 aa20.83■□□□□ 0.93
HERPUD1-215ENST00000568676 MIS18AQ9NYP9 233 aa20.83■□□□□ 0.93
HERPUD1-215ENST00000568676 DEFB115Q30KQ5 88 aa20.82■□□□□ 0.92
HERPUD1-215ENST00000568676 NUTM1Q86Y26 1132 aa20.82■□□□□ 0.92
HERPUD1-215ENST00000568676 VPS33BQ9H267 617 aa20.82■□□□□ 0.92
HERPUD1-215ENST00000568676 WBP1LQ9NX94 342 aa20.82■□□□□ 0.92
HERPUD1-215ENST00000568676 NUP98P52948 1817 aa20.81■□□□□ 0.92
HERPUD1-215ENST00000568676 PARP10Q53GL7 1025 aa20.81■□□□□ 0.92
HERPUD1-215ENST00000568676 PPP1R42Q7Z4L9 355 aa20.81■□□□□ 0.92
HERPUD1-215ENST00000568676 NGEFQ8N5V2 710 aa20.81■□□□□ 0.92
HERPUD1-215ENST00000568676 TMX4Q9H1E5 349 aaPredicted RBP20.81■□□□□ 0.92
HERPUD1-215ENST00000568676 RRP7AQ9Y3A4 280 aaKnown RBP20.81■□□□□ 0.92
HERPUD1-215ENST00000568676 MAP2K1Q02750 393 aaPredicted RBP20.8■□□□□ 0.92
HERPUD1-215ENST00000568676 NFE2L2Q16236 605 aa20.8■□□□□ 0.92
HERPUD1-215ENST00000568676 MAP1SQ66K74 1059 aaPredicted RBP20.8■□□□□ 0.92
HERPUD1-215ENST00000568676 GIGYF2Q6Y7W6 1299 aaKnown RBP20.8■□□□□ 0.92
HERPUD1-215ENST00000568676 ZNF34Q8IZ26 560 aa20.8■□□□□ 0.92
HERPUD1-215ENST00000568676 UBN2Q6ZU65 1347 aa20.79■□□□□ 0.92
HERPUD1-215ENST00000568676 TTLL7Q6ZT98 887 aa20.79■□□□□ 0.92
HERPUD1-215ENST00000568676 LARGE2Q8N3Y3 721 aa20.79■□□□□ 0.92
HERPUD1-215ENST00000568676 PLEKHF1Q96S99 279 aa20.79■□□□□ 0.92
HERPUD1-215ENST00000568676 PPEF1O14829 653 aaPredicted RBP20.78■□□□□ 0.92
HERPUD1-215ENST00000568676 MYL6BP14649 208 aa20.78■□□□□ 0.92
HERPUD1-215ENST00000568676 SUSD4Q5VX71 490 aa20.78■□□□□ 0.92
HERPUD1-215ENST00000568676 USP50Q70EL3 339 aaPredicted RBP20.78■□□□□ 0.92
HERPUD1-215ENST00000568676 ZBTB3Q9H5J0 574 aa20.78■□□□□ 0.92
HERPUD1-215ENST00000568676 DDX21Q9NR30 783 aaKnown RBP eCLIP20.78■□□□□ 0.92
HERPUD1-215ENST00000568676 GJA3Q9Y6H8 435 aa20.78■□□□□ 0.92
HERPUD1-215ENST00000568676 DLG5Q8TDM6 1919 aa20.78■□□□□ 0.92
HERPUD1-215ENST00000568676 MAPK8IP3Q9UPT6 1336 aa20.78■□□□□ 0.92
HERPUD1-215ENST00000568676 NTSR2O95665 410 aa20.77■□□□□ 0.92
HERPUD1-215ENST00000568676 GPTP24298 496 aa20.77■□□□□ 0.92
HERPUD1-215ENST00000568676 NIM1KQ8IY84 436 aa20.77■□□□□ 0.92
HERPUD1-215ENST00000568676 NLRP3Q96P20 1036 aa20.77■□□□□ 0.92
HERPUD1-215ENST00000568676 ABT1Q9ULW3 272 aaKnown RBP20.77■□□□□ 0.92
HERPUD1-215ENST00000568676 WDR33Q9C0J8 1336 aaKnown RBP20.77■□□□□ 0.91
HERPUD1-215ENST00000568676 SCNN1DP51172 638 aa20.76■□□□□ 0.91
HERPUD1-215ENST00000568676 SUPT20HQ8NEM7 779 aa20.76■□□□□ 0.91
HERPUD1-215ENST00000568676 BABAM1Q9NWV8 329 aa20.76■□□□□ 0.91
HERPUD1-215ENST00000568676 ECE1P42892 770 aa20.75■□□□□ 0.91
HERPUD1-215ENST00000568676 SLC10A5Q5PT55 438 aa20.75■□□□□ 0.91
HERPUD1-215ENST00000568676 COL4A5P29400 1685 aa20.74■□□□□ 0.91
HERPUD1-215ENST00000568676 ATP6V0A2Q9Y487 856 aa20.74■□□□□ 0.91
HERPUD1-215ENST00000568676 PPIP5K2O43314 1243 aa20.73■□□□□ 0.91
HERPUD1-215ENST00000568676 LBX1P52954 281 aa20.73■□□□□ 0.91
HERPUD1-215ENST00000568676 UTP14AQ9BVJ6 771 aaKnown RBP20.73■□□□□ 0.91
HERPUD1-215ENST00000568676 LTBP1Q14766 1721 aa20.73■□□□□ 0.91
HERPUD1-215ENST00000568676 EPS15P42566 896 aa20.72■□□□□ 0.91
HERPUD1-215ENST00000568676 HSP90AB3PQ58FF7 597 aa20.72■□□□□ 0.91
HERPUD1-215ENST00000568676 RTFDC1Q9BY42 306 aaPredicted RBP20.72■□□□□ 0.91
HERPUD1-215ENST00000568676 ADARB2Q9NS39 739 aaKnown RBP20.72■□□□□ 0.91
HERPUD1-215ENST00000568676 TSPYL4Q9UJ04 414 aa20.72■□□□□ 0.91
HERPUD1-215ENST00000568676 CDHR2Q9BYE9 1310 aa20.72■□□□□ 0.91
HERPUD1-215ENST00000568676 BBOX1O75936 387 aa20.71■□□□□ 0.91
HERPUD1-215ENST00000568676 HSPA8P11142 646 aaKnown RBP20.71■□□□□ 0.91
HERPUD1-215ENST00000568676 THUMPD2Q9BTF0 503 aaKnown RBP20.71■□□□□ 0.91
HERPUD1-215ENST00000568676 BEGAINQ9BUH8 593 aa20.71■□□□□ 0.91
HERPUD1-215ENST00000568676 THSD7BQ9C0I4 1608 aa20.71■□□□□ 0.91
HERPUD1-215ENST00000568676 LRP10Q7Z4F1 713 aa20.7■□□□□ 0.9
HERPUD1-215ENST00000568676 GPRC5DQ9NZD1 345 aa20.7■□□□□ 0.9
HERPUD1-215ENST00000568676 ZNRF3Q9ULT6 936 aa20.7■□□□□ 0.9
HERPUD1-215ENST00000568676 LMOD3Q0VAK6 560 aa20.69■□□□□ 0.9
HERPUD1-215ENST00000568676 PDIA6Q15084 440 aa20.69■□□□□ 0.9
HERPUD1-215ENST00000568676 AOC3Q16853 763 aa20.69■□□□□ 0.9
HERPUD1-215ENST00000568676 SP8Q8IXZ3 490 aa20.69■□□□□ 0.9
HERPUD1-215ENST00000568676 CAPNS2Q96L46 248 aa20.69■□□□□ 0.9
HERPUD1-215ENST00000568676 TCERG1O14776 1098 aaKnown RBP20.68■□□□□ 0.9
HERPUD1-215ENST00000568676 C3orf67Q6ZVT6 689 aa20.68■□□□□ 0.9
HERPUD1-215ENST00000568676 TLL2Q9Y6L7 1015 aa20.68■□□□□ 0.9
HERPUD1-215ENST00000568676 ABCC4O15439 1325 aa20.68■□□□□ 0.9
HERPUD1-215ENST00000568676 EIF2S2P20042 333 aaKnown RBP20.67■□□□□ 0.9
HERPUD1-215ENST00000568676 MAP2K2P36507 400 aa20.67■□□□□ 0.9
HERPUD1-215ENST00000568676 DPP8Q6V1X1 898 aaPredicted RBP20.67■□□□□ 0.9
HERPUD1-215ENST00000568676 TMC4Q7Z404 712 aa20.67■□□□□ 0.9
HERPUD1-215ENST00000568676 ZC3H15Q8WU90 426 aaKnown RBP20.67■□□□□ 0.9
HERPUD1-215ENST00000568676 GPR101Q96P66 508 aaPredicted RBP20.67■□□□□ 0.9
HERPUD1-215ENST00000568676 RIPK4P57078 832 aa20.66■□□□□ 0.9
HERPUD1-215ENST00000568676 CXCL9Q07325 125 aa20.66■□□□□ 0.9
HERPUD1-215ENST00000568676 KIAA2012Q0VF49 1180 aa20.66■□□□□ 0.9
HERPUD1-215ENST00000568676 TNIP1Q15025 636 aa20.66■□□□□ 0.9
HERPUD1-215ENST00000568676 CST9Q5W186 159 aa20.66■□□□□ 0.9
HERPUD1-215ENST00000568676 PAXIP1Q6ZW49 1069 aaPredicted RBP20.66■□□□□ 0.9
HERPUD1-215ENST00000568676 MPNDQ8N594 471 aa20.66■□□□□ 0.9
HERPUD1-215ENST00000568676 HHIPL1Q96JK4 782 aa20.66■□□□□ 0.9
HERPUD1-215ENST00000568676 TRPM7Q96QT4 1865 aa20.66■□□□□ 0.9
HERPUD1-215ENST00000568676 CIAPIN1Q6FI81 312 aa20.65■□□□□ 0.9
HERPUD1-215ENST00000568676 DDX46Q7L014 1031 aaKnown RBP20.65■□□□□ 0.9
HERPUD1-215ENST00000568676 PGAP2Q9UHJ9 254 aa20.65■□□□□ 0.9
HERPUD1-215ENST00000568676 CA12O43570 354 aa20.64■□□□□ 0.89
HERPUD1-215ENST00000568676 NLRP10Q86W26 655 aa20.64■□□□□ 0.89
HERPUD1-215ENST00000568676 ABHD8Q96I13 439 aa20.64■□□□□ 0.89
HERPUD1-215ENST00000568676 ANKRD36CQ5JPF3 1778 aa20.64■□□□□ 0.89
HERPUD1-215ENST00000568676 SH3TC1Q8TE82 1336 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms