RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 PNMA8AQ86V59 439 aaPredicted RBP19.86■□□□□ 0.77
COMMD4-223ENST00000568301 NUTM1Q86Y26 1132 aa19.86■□□□□ 0.77
COMMD4-223ENST00000568301 GPC2Q8N158 579 aa19.86■□□□□ 0.77
COMMD4-223ENST00000568301 ABCC12Q96J65 1359 aa19.85■□□□□ 0.77
COMMD4-223ENST00000568301 MAPK8IP3Q9UPT6 1336 aa19.85■□□□□ 0.77
COMMD4-223ENST00000568301 LBX1P52954 281 aa19.85■□□□□ 0.77
COMMD4-223ENST00000568301 DEFB115Q30KQ5 88 aa19.85■□□□□ 0.77
COMMD4-223ENST00000568301 CC2D2BQ6DHV5 1058 aa19.85■□□□□ 0.77
COMMD4-223ENST00000568301 TTLL7Q6ZT98 887 aa19.85■□□□□ 0.77
COMMD4-223ENST00000568301 PSMD1Q99460 953 aa19.85■□□□□ 0.77
COMMD4-223ENST00000568301 THUMPD2Q9BTF0 503 aaKnown RBP19.85■□□□□ 0.77
COMMD4-223ENST00000568301 ERBB4Q15303 1308 aa19.84■□□□□ 0.77
COMMD4-223ENST00000568301 RASSF10A6NK89 507 aa19.84■□□□□ 0.77
COMMD4-223ENST00000568301 MYL6BP14649 208 aa19.84■□□□□ 0.77
COMMD4-223ENST00000568301 HOXA10P31260 410 aaPredicted RBP19.84■□□□□ 0.77
COMMD4-223ENST00000568301 JDP2Q8WYK2 163 aa19.84■□□□□ 0.77
COMMD4-223ENST00000568301 COL4A5P29400 1685 aa19.84■□□□□ 0.77
COMMD4-223ENST00000568301 IBTKQ9P2D0 1353 aaPredicted RBP19.83■□□□□ 0.77
COMMD4-223ENST00000568301 GJA3Q9Y6H8 435 aa19.83■□□□□ 0.77
COMMD4-223ENST00000568301 GRIPAP1Q4V328 841 aa19.82■□□□□ 0.76
COMMD4-223ENST00000568301 SLC51AQ86UW1 340 aa19.82■□□□□ 0.76
COMMD4-223ENST00000568301 ZNF34Q8IZ26 560 aa19.82■□□□□ 0.76
COMMD4-223ENST00000568301 RIC1Q4ADV7 1423 aa19.82■□□□□ 0.76
COMMD4-223ENST00000568301 LTBP1Q14766 1721 aa19.82■□□□□ 0.76
COMMD4-223ENST00000568301 WDR33Q9C0J8 1336 aaKnown RBP19.81■□□□□ 0.76
COMMD4-223ENST00000568301 EIF6P56537 245 aaKnown RBP19.81■□□□□ 0.76
COMMD4-223ENST00000568301 SUSD4Q5VX71 490 aa19.81■□□□□ 0.76
COMMD4-223ENST00000568301 GIGYF2Q6Y7W6 1299 aaKnown RBP19.81■□□□□ 0.76
COMMD4-223ENST00000568301 RPGRQ92834 1020 aaKnown RBP19.81■□□□□ 0.76
COMMD4-223ENST00000568301 ZBTB3Q9H5J0 574 aa19.81■□□□□ 0.76
COMMD4-223ENST00000568301 BABAM1Q9NWV8 329 aa19.81■□□□□ 0.76
COMMD4-223ENST00000568301 UBN2Q6ZU65 1347 aa19.8■□□□□ 0.76
COMMD4-223ENST00000568301 HSPA8P11142 646 aaKnown RBP19.8■□□□□ 0.76
COMMD4-223ENST00000568301 GPTP24298 496 aa19.8■□□□□ 0.76
COMMD4-223ENST00000568301 FMR1Q06787 632 aaKnown RBP eCLIP19.8■□□□□ 0.76
COMMD4-223ENST00000568301 RALBP1Q15311 655 aa19.8■□□□□ 0.76
COMMD4-223ENST00000568301 CRAMP1Q96RY5 1269 aa19.8■□□□□ 0.76
COMMD4-223ENST00000568301 DDX21Q9NR30 783 aaKnown RBP eCLIP19.8■□□□□ 0.76
COMMD4-223ENST00000568301 TSPYL4Q9UJ04 414 aa19.8■□□□□ 0.76
COMMD4-223ENST00000568301 ABT1Q9ULW3 272 aaKnown RBP19.8■□□□□ 0.76
COMMD4-223ENST00000568301 EPS15P42566 896 aa19.79■□□□□ 0.76
COMMD4-223ENST00000568301 RIPK4P57078 832 aa19.79■□□□□ 0.76
COMMD4-223ENST00000568301 TCERG1O14776 1098 aaKnown RBP19.78■□□□□ 0.76
COMMD4-223ENST00000568301 LMOD1P29536 600 aaPredicted RBP19.78■□□□□ 0.76
COMMD4-223ENST00000568301 SCNN1DP51172 638 aa19.78■□□□□ 0.76
COMMD4-223ENST00000568301 PARP10Q53GL7 1025 aa19.78■□□□□ 0.76
COMMD4-223ENST00000568301 LRP10Q7Z4F1 713 aa19.78■□□□□ 0.76
COMMD4-223ENST00000568301 PPP1R42Q7Z4L9 355 aa19.78■□□□□ 0.76
COMMD4-223ENST00000568301 LARGE2Q8N3Y3 721 aa19.78■□□□□ 0.76
COMMD4-223ENST00000568301 RBM17Q96I25 401 aaKnown RBP19.78■□□□□ 0.76
COMMD4-223ENST00000568301 NTSR2O95665 410 aa19.77■□□□□ 0.76
COMMD4-223ENST00000568301 MAP2K1Q02750 393 aaPredicted RBP19.77■□□□□ 0.76
COMMD4-223ENST00000568301 PDIA6Q15084 440 aa19.77■□□□□ 0.76
COMMD4-223ENST00000568301 LMOD3Q0VAK6 560 aa19.76■□□□□ 0.75
COMMD4-223ENST00000568301 SLC10A5Q5PT55 438 aa19.76■□□□□ 0.75
COMMD4-223ENST00000568301 C3orf67Q6ZVT6 689 aa19.76■□□□□ 0.75
COMMD4-223ENST00000568301 PPEF1O14829 653 aaPredicted RBP19.75■□□□□ 0.75
COMMD4-223ENST00000568301 EIF2S2P20042 333 aaKnown RBP19.75■□□□□ 0.75
COMMD4-223ENST00000568301 TMPOP42166 694 aaKnown RBP19.75■□□□□ 0.75
COMMD4-223ENST00000568301 CST9Q5W186 159 aa19.75■□□□□ 0.75
COMMD4-223ENST00000568301 NLRP3Q96P20 1036 aa19.75■□□□□ 0.75
COMMD4-223ENST00000568301 TRAF5O00463 557 aa19.74■□□□□ 0.75
COMMD4-223ENST00000568301 ABHD8Q96I13 439 aa19.74■□□□□ 0.75
COMMD4-223ENST00000568301 UTP14AQ9BVJ6 771 aaKnown RBP19.74■□□□□ 0.75
COMMD4-223ENST00000568301 CYP4F22Q6NT55 531 aa19.73■□□□□ 0.75
COMMD4-223ENST00000568301 PAXIP1Q6ZW49 1069 aaPredicted RBP19.73■□□□□ 0.75
COMMD4-223ENST00000568301 USP50Q70EL3 339 aaPredicted RBP19.73■□□□□ 0.75
COMMD4-223ENST00000568301 NIM1KQ8IY84 436 aa19.73■□□□□ 0.75
COMMD4-223ENST00000568301 CAPNS2Q96L46 248 aa19.73■□□□□ 0.75
COMMD4-223ENST00000568301 TRPM7Q96QT4 1865 aa19.73■□□□□ 0.75
COMMD4-223ENST00000568301 GRM1Q13255 1194 aa19.72■□□□□ 0.75
COMMD4-223ENST00000568301 TMX4Q9H1E5 349 aaPredicted RBP19.72■□□□□ 0.75
COMMD4-223ENST00000568301 VPS33BQ9H267 617 aa19.72■□□□□ 0.75
COMMD4-223ENST00000568301 PPIP5K2O43314 1243 aa19.71■□□□□ 0.75
COMMD4-223ENST00000568301 AOC3Q16853 763 aa19.71■□□□□ 0.75
COMMD4-223ENST00000568301 PROSER3Q2NL68 480 aa19.71■□□□□ 0.75
COMMD4-223ENST00000568301 HSP90AB3PQ58FF7 597 aa19.71■□□□□ 0.75
COMMD4-223ENST00000568301 GPR101Q96P66 508 aaPredicted RBP19.71■□□□□ 0.75
COMMD4-223ENST00000568301 ATP6V0A2Q9Y487 856 aa19.71■□□□□ 0.75
COMMD4-223ENST00000568301 THSD7BQ9C0I4 1608 aa19.7■□□□□ 0.74
COMMD4-223ENST00000568301 ECE1P42892 770 aa19.7■□□□□ 0.74
COMMD4-223ENST00000568301 COPS6Q7L5N1 327 aa19.7■□□□□ 0.74
COMMD4-223ENST00000568301 GPRC5DQ9NZD1 345 aa19.7■□□□□ 0.74
COMMD4-223ENST00000568301 ANKRD36CQ5JPF3 1778 aa19.7■□□□□ 0.74
COMMD4-223ENST00000568301 CHL1O00533 1208 aa19.69■□□□□ 0.74
COMMD4-223ENST00000568301 BBOX1O75936 387 aa19.69■□□□□ 0.74
COMMD4-223ENST00000568301 ANXA1P04083 346 aa19.69■□□□□ 0.74
COMMD4-223ENST00000568301 ADARB2Q9NS39 739 aaKnown RBP19.69■□□□□ 0.74
COMMD4-223ENST00000568301 TLL2Q9Y6L7 1015 aa19.69■□□□□ 0.74
COMMD4-223ENST00000568301 AOC2O75106 756 aa19.68■□□□□ 0.74
COMMD4-223ENST00000568301 CXCL9Q07325 125 aa19.68■□□□□ 0.74
COMMD4-223ENST00000568301 TCIRG1Q13488 830 aa19.68■□□□□ 0.74
COMMD4-223ENST00000568301 NLRP10Q86W26 655 aa19.68■□□□□ 0.74
COMMD4-223ENST00000568301 XAGE3Q8WTP9 111 aa19.68■□□□□ 0.74
COMMD4-223ENST00000568301 BEGAINQ9BUH8 593 aa19.68■□□□□ 0.74
COMMD4-223ENST00000568301 MYBBP1AQ9BQG0 1328 aaKnown RBP19.68■□□□□ 0.74
COMMD4-223ENST00000568301 AIMP1Q12904 312 aaKnown RBP19.67■□□□□ 0.74
COMMD4-223ENST00000568301 SP8Q8IXZ3 490 aa19.67■□□□□ 0.74
COMMD4-223ENST00000568301 SUPT20HQ8NEM7 779 aa19.67■□□□□ 0.74
COMMD4-223ENST00000568301 RTFDC1Q9BY42 306 aaPredicted RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms