RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 RPGRQ92834 1020 aaKnown RBP16.77■□□□□ 0.28
TSC2-220ENST00000568238 PCNTO95613 3336 aa16.77■□□□□ 0.27
TSC2-220ENST00000568238 HOXB7P09629 217 aa16.76■□□□□ 0.27
TSC2-220ENST00000568238 FKBP4Q02790 459 aaKnown RBP eCLIP16.76■□□□□ 0.27
TSC2-220ENST00000568238 XAGE3Q8WTP9 111 aa16.76■□□□□ 0.27
TSC2-220ENST00000568238 DDX21Q9NR30 783 aaKnown RBP eCLIP16.76■□□□□ 0.27
TSC2-220ENST00000568238 CCER2I3L3R5 266 aa16.75■□□□□ 0.27
TSC2-220ENST00000568238 AIMP1Q12904 312 aaKnown RBP16.75■□□□□ 0.27
TSC2-220ENST00000568238 HSP90AB3PQ58FF7 597 aa16.75■□□□□ 0.27
TSC2-220ENST00000568238 HDGFL1Q5TGJ6 251 aa16.75■□□□□ 0.27
TSC2-220ENST00000568238 OLFM4Q6UX06 510 aa16.75■□□□□ 0.27
TSC2-220ENST00000568238 COPS6Q7L5N1 327 aa16.75■□□□□ 0.27
TSC2-220ENST00000568238 RTKN2Q8IZC4 609 aa16.75■□□□□ 0.27
TSC2-220ENST00000568238 SMC1BQ8NDV3 1235 aa16.75■□□□□ 0.27
TSC2-220ENST00000568238 CFAP44Q96MT7 982 aa16.75■□□□□ 0.27
TSC2-220ENST00000568238 CHPF2Q9P2E5 772 aa16.75■□□□□ 0.27
TSC2-220ENST00000568238 RNF123Q5XPI4 1314 aa16.74■□□□□ 0.27
TSC2-220ENST00000568238 SNED1Q8TER0 1413 aa16.74■□□□□ 0.27
TSC2-220ENST00000568238 APAF1O14727 1248 aa16.74■□□□□ 0.27
TSC2-220ENST00000568238 HOXA10P31260 410 aaPredicted RBP16.74■□□□□ 0.27
TSC2-220ENST00000568238 CALD1Q05682 793 aaKnown RBP16.74■□□□□ 0.27
TSC2-220ENST00000568238 FAM9BQ8IZU0 186 aa16.74■□□□□ 0.27
TSC2-220ENST00000568238 UTP14AQ9BVJ6 771 aaKnown RBP16.74■□□□□ 0.27
TSC2-220ENST00000568238 SCN4AP35499 1836 aa16.74■□□□□ 0.27
TSC2-220ENST00000568238 ZNF277Q9NRM2 450 aaPredicted RBP16.73■□□□□ 0.27
TSC2-220ENST00000568238 MBIPQ9NS73 344 aa16.73■□□□□ 0.27
TSC2-220ENST00000568238 RBM17Q96I25 401 aaKnown RBP16.72■□□□□ 0.27
TSC2-220ENST00000568238 IFT57Q9NWB7 429 aa16.72■□□□□ 0.27
TSC2-220ENST00000568238 DDX60Q8IY21 1712 aaKnown RBP16.72■□□□□ 0.27
TSC2-220ENST00000568238 POTECB2RU33 542 aa16.71■□□□□ 0.27
TSC2-220ENST00000568238 ZNF853P0CG23 659 aa16.71■□□□□ 0.27
TSC2-220ENST00000568238 DUSP27Q5VZP5 1158 aa16.71■□□□□ 0.27
TSC2-220ENST00000568238 CC2D2BQ6DHV5 1058 aa16.71■□□□□ 0.27
TSC2-220ENST00000568238 C3orf67Q6ZVT6 689 aa16.71■□□□□ 0.27
TSC2-220ENST00000568238 NLRP10Q86W26 655 aa16.71■□□□□ 0.27
TSC2-220ENST00000568238 NLRP3Q96P20 1036 aa16.71■□□□□ 0.27
TSC2-220ENST00000568238 CRAMP1Q96RY5 1269 aa16.71■□□□□ 0.27
TSC2-220ENST00000568238 PSMD1Q99460 953 aa16.71■□□□□ 0.27
TSC2-220ENST00000568238 DBF4Q9UBU7 674 aaPredicted RBP16.71■□□□□ 0.27
TSC2-220ENST00000568238 PPEF1O14829 653 aaPredicted RBP16.7■□□□□ 0.26
TSC2-220ENST00000568238 DDNO94850 711 aaPredicted RBP16.7■□□□□ 0.26
TSC2-220ENST00000568238 IARSP41252 1262 aaKnown RBP16.7■□□□□ 0.26
TSC2-220ENST00000568238 GNAI1P63096 354 aa16.7■□□□□ 0.26
TSC2-220ENST00000568238 TCIRG1Q13488 830 aa16.7■□□□□ 0.26
TSC2-220ENST00000568238 SYNE4Q8N205 404 aa16.7■□□□□ 0.26
TSC2-220ENST00000568238 SLC10A5Q5PT55 438 aa16.69■□□□□ 0.26
TSC2-220ENST00000568238 HYPKQ9NX55 129 aa16.69■□□□□ 0.26
TSC2-220ENST00000568238 SH3TC1Q8TE82 1336 aa16.69■□□□□ 0.26
TSC2-220ENST00000568238 ZNF541Q9H0D2 1346 aa16.69■□□□□ 0.26
TSC2-220ENST00000568238 IQCA1LA6NCM1 817 aa16.68■□□□□ 0.26
TSC2-220ENST00000568238 GRIPAP1Q4V328 841 aa16.68■□□□□ 0.26
TSC2-220ENST00000568238 PLBD2Q8NHP8 589 aa16.68■□□□□ 0.26
TSC2-220ENST00000568238 L3MBTL3Q96JM7 780 aaPredicted RBP16.68■□□□□ 0.26
TSC2-220ENST00000568238 TRMT112Q9UI30 125 aaKnown RBP16.68■□□□□ 0.26
TSC2-220ENST00000568238 ABCC4O15439 1325 aa16.68■□□□□ 0.26
TSC2-220ENST00000568238 TAF1P21675 1872 aa16.67■□□□□ 0.26
TSC2-220ENST00000568238 COL4A5P29400 1685 aa16.67■□□□□ 0.26
TSC2-220ENST00000568238 HTRA3P83110 453 aa16.67■□□□□ 0.26
TSC2-220ENST00000568238 ANKRD13DQ6ZTN6 518 aa16.67■□□□□ 0.26
TSC2-220ENST00000568238 DNAJC5GQ8N7S2 189 aa16.67■□□□□ 0.26
TSC2-220ENST00000568238 LRRC37AA6NMS7 1700 aa16.66■□□□□ 0.26
TSC2-220ENST00000568238 TCERG1O14776 1098 aaKnown RBP16.66■□□□□ 0.26
TSC2-220ENST00000568238 HCLS1P14317 486 aaPredicted RBP16.66■□□□□ 0.26
TSC2-220ENST00000568238 SLC51AQ86UW1 340 aa16.66■□□□□ 0.26
TSC2-220ENST00000568238 JDP2Q8WYK2 163 aa16.66■□□□□ 0.26
TSC2-220ENST00000568238 TMX4Q9H1E5 349 aaPredicted RBP16.66■□□□□ 0.26
TSC2-220ENST00000568238 FZD9O00144 591 aa16.65■□□□□ 0.26
TSC2-220ENST00000568238 ADAMTSL1Q8N6G6 1762 aa16.64■□□□□ 0.25
TSC2-220ENST00000568238 GOLGA2Q08379 1002 aa16.64■□□□□ 0.25
TSC2-220ENST00000568238 CHADLQ6NUI6 762 aa16.64■□□□□ 0.25
TSC2-220ENST00000568238 ZNF428Q96B54 188 aa16.64■□□□□ 0.25
TSC2-220ENST00000568238 ISCA1Q9BUE6 129 aa16.64■□□□□ 0.25
TSC2-220ENST00000568238 ATP6V0A2Q9Y487 856 aa16.64■□□□□ 0.25
TSC2-220ENST00000568238 ATP5J2-PTCD1G3V325 749 aa16.63■□□□□ 0.25
TSC2-220ENST00000568238 ELL2O00472 640 aaPredicted RBP16.63■□□□□ 0.25
TSC2-220ENST00000568238 DDX46Q7L014 1031 aaKnown RBP16.63■□□□□ 0.25
TSC2-220ENST00000568238 GPC2Q8N158 579 aa16.63■□□□□ 0.25
TSC2-220ENST00000568238 LARGE2Q8N3Y3 721 aa16.63■□□□□ 0.25
TSC2-220ENST00000568238 KLRG1Q96E93 195 aa16.63■□□□□ 0.25
TSC2-220ENST00000568238 TAF1DQ9H5J8 278 aaPredicted RBP16.63■□□□□ 0.25
TSC2-220ENST00000568238 BBOX1O75936 387 aa16.62■□□□□ 0.25
TSC2-220ENST00000568238 POTEIP0CG38 1075 aa16.62■□□□□ 0.25
TSC2-220ENST00000568238 POTEJP0CG39 1038 aa16.62■□□□□ 0.25
TSC2-220ENST00000568238 EIF6P56537 245 aaKnown RBP16.62■□□□□ 0.25
TSC2-220ENST00000568238 CCDC27Q2M243 656 aa16.62■□□□□ 0.25
TSC2-220ENST00000568238 LDHDQ86WU2 507 aa16.62■□□□□ 0.25
TSC2-220ENST00000568238 C8orf58Q8NAV2 365 aa16.62■□□□□ 0.25
TSC2-220ENST00000568238 CHMP4AQ9BY43 222 aa16.62■□□□□ 0.25
TSC2-220ENST00000568238 HACL1Q9UJ83 578 aa16.62■□□□□ 0.25
TSC2-220ENST00000568238 GRAPQ13588 217 aa16.61■□□□□ 0.25
TSC2-220ENST00000568238 RIC3Q7Z5B4 369 aa16.61■□□□□ 0.25
TSC2-220ENST00000568238 NIM1KQ8IY84 436 aa16.61■□□□□ 0.25
TSC2-220ENST00000568238 GRAPLQ8TC17 118 aaPredicted RBP16.61■□□□□ 0.25
TSC2-220ENST00000568238 FAM89AQ96GI7 184 aa16.61■□□□□ 0.25
TSC2-220ENST00000568238 LTBP1Q14766 1721 aa16.61■□□□□ 0.25
TSC2-220ENST00000568238 DUOX1Q9NRD9 1551 aa16.6■□□□□ 0.25
TSC2-220ENST00000568238 PPIP5K2O43314 1243 aa16.6■□□□□ 0.25
TSC2-220ENST00000568238 TRIM28Q13263 835 aaKnown RBP16.6■□□□□ 0.25
TSC2-220ENST00000568238 CCDC30Q5VVM6 783 aa16.6■□□□□ 0.25
TSC2-220ENST00000568238 DPP8Q6V1X1 898 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms