RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 MBIPQ9NS73 344 aa15.93■□□□□ 0.14
GTF3C1-208ENST00000567843 FKBP4Q02790 459 aaKnown RBP eCLIP15.92■□□□□ 0.14
GTF3C1-208ENST00000567843 CRY2Q49AN0 593 aa15.92■□□□□ 0.14
GTF3C1-208ENST00000567843 DUSP27Q5VZP5 1158 aa15.92■□□□□ 0.14
GTF3C1-208ENST00000567843 PPP1R42Q7Z4L9 355 aa15.92■□□□□ 0.14
GTF3C1-208ENST00000567843 CFAP44Q96MT7 982 aa15.92■□□□□ 0.14
GTF3C1-208ENST00000567843 DDX21Q9NR30 783 aaKnown RBP eCLIP15.92■□□□□ 0.14
GTF3C1-208ENST00000567843 FER1L6Q2WGJ9 1857 aa15.92■□□□□ 0.14
GTF3C1-208ENST00000567843 TIAM2Q8IVF5 1701 aa15.91■□□□□ 0.14
GTF3C1-208ENST00000567843 HCLS1P14317 486 aaPredicted RBP15.91■□□□□ 0.14
GTF3C1-208ENST00000567843 FSTL1Q12841 308 aa15.91■□□□□ 0.14
GTF3C1-208ENST00000567843 PARP10Q53GL7 1025 aa15.91■□□□□ 0.14
GTF3C1-208ENST00000567843 NLRP10Q86W26 655 aa15.9■□□□□ 0.14
GTF3C1-208ENST00000567843 RTKN2Q8IZC4 609 aa15.9■□□□□ 0.14
GTF3C1-208ENST00000567843 SMC1BQ8NDV3 1235 aa15.9■□□□□ 0.14
GTF3C1-208ENST00000567843 RBM17Q96I25 401 aaKnown RBP15.9■□□□□ 0.14
GTF3C1-208ENST00000567843 POTEIP0CG38 1075 aa15.89■□□□□ 0.13
GTF3C1-208ENST00000567843 POTEJP0CG39 1038 aa15.89■□□□□ 0.13
GTF3C1-208ENST00000567843 HOXA10P31260 410 aaPredicted RBP15.89■□□□□ 0.13
GTF3C1-208ENST00000567843 ZEB1P37275 1124 aaPredicted RBP15.89■□□□□ 0.13
GTF3C1-208ENST00000567843 TCIRG1Q13488 830 aa15.89■□□□□ 0.13
GTF3C1-208ENST00000567843 NLRP3Q96P20 1036 aa15.89■□□□□ 0.13
GTF3C1-208ENST00000567843 TRMT112Q9UI30 125 aaKnown RBP15.89■□□□□ 0.13
GTF3C1-208ENST00000567843 ZNF541Q9H0D2 1346 aa15.89■□□□□ 0.13
GTF3C1-208ENST00000567843 IBTKQ9P2D0 1353 aaPredicted RBP15.88■□□□□ 0.13
GTF3C1-208ENST00000567843 ATP5J2-PTCD1G3V325 749 aa15.88■□□□□ 0.13
GTF3C1-208ENST00000567843 PPEF1O14829 653 aaPredicted RBP15.88■□□□□ 0.13
GTF3C1-208ENST00000567843 ZNF853P0CG23 659 aa15.88■□□□□ 0.13
GTF3C1-208ENST00000567843 IARSP41252 1262 aaKnown RBP15.88■□□□□ 0.13
GTF3C1-208ENST00000567843 HSP90AB3PQ58FF7 597 aa15.88■□□□□ 0.13
GTF3C1-208ENST00000567843 RTL5Q5HYW3 569 aaPredicted RBP15.88■□□□□ 0.13
GTF3C1-208ENST00000567843 DBF4Q9UBU7 674 aaPredicted RBP15.88■□□□□ 0.13
GTF3C1-208ENST00000567843 ANKRD13DQ6ZTN6 518 aa15.87■□□□□ 0.13
GTF3C1-208ENST00000567843 DNAJC5GQ8N7S2 189 aa15.87■□□□□ 0.13
GTF3C1-208ENST00000567843 CRAMP1Q96RY5 1269 aa15.87■□□□□ 0.13
GTF3C1-208ENST00000567843 IFT57Q9NWB7 429 aa15.87■□□□□ 0.13
GTF3C1-208ENST00000567843 ARFGEF2Q9Y6D5 1785 aa15.87■□□□□ 0.13
GTF3C1-208ENST00000567843 ZNF316A6NFI3 1004 aaPredicted RBP15.86■□□□□ 0.13
GTF3C1-208ENST00000567843 GNAI1P63096 354 aa15.86■□□□□ 0.13
GTF3C1-208ENST00000567843 SLC10A5Q5PT55 438 aa15.86■□□□□ 0.13
GTF3C1-208ENST00000567843 C8orf58Q8NAV2 365 aa15.86■□□□□ 0.13
GTF3C1-208ENST00000567843 PHAXQ9H814 394 aaKnown RBP15.86■□□□□ 0.13
GTF3C1-208ENST00000567843 RIC1Q4ADV7 1423 aa15.85■□□□□ 0.13
GTF3C1-208ENST00000567843 HOXB7P09629 217 aa15.85■□□□□ 0.13
GTF3C1-208ENST00000567843 PLBD2Q8NHP8 589 aa15.85■□□□□ 0.13
GTF3C1-208ENST00000567843 HYPKQ9NX55 129 aa15.85■□□□□ 0.13
GTF3C1-208ENST00000567843 GJA3Q9Y6H8 435 aa15.85■□□□□ 0.13
GTF3C1-208ENST00000567843 ABCC4O15439 1325 aa15.85■□□□□ 0.13
GTF3C1-208ENST00000567843 SH3TC1Q8TE82 1336 aa15.85■□□□□ 0.13
GTF3C1-208ENST00000567843 DICER1Q9UPY3 1922 aaKnown RBP15.84■□□□□ 0.13
GTF3C1-208ENST00000567843 CALD1Q05682 793 aaKnown RBP15.84■□□□□ 0.13
GTF3C1-208ENST00000567843 CC2D2BQ6DHV5 1058 aa15.84■□□□□ 0.13
GTF3C1-208ENST00000567843 LARGE2Q8N3Y3 721 aa15.84■□□□□ 0.13
GTF3C1-208ENST00000567843 JDP2Q8WYK2 163 aa15.84■□□□□ 0.13
GTF3C1-208ENST00000567843 TSR2Q969E8 191 aaKnown RBP15.84■□□□□ 0.13
GTF3C1-208ENST00000567843 FAM89AQ96GI7 184 aa15.84■□□□□ 0.13
GTF3C1-208ENST00000567843 PSMD1Q99460 953 aa15.84■□□□□ 0.13
GTF3C1-208ENST00000567843 MRS2Q9HD23 443 aa15.84■□□□□ 0.13
GTF3C1-208ENST00000567843 SALL2Q9Y467 1007 aaPredicted RBP15.84■□□□□ 0.13
GTF3C1-208ENST00000567843 EAPPQ56P03 285 aaPredicted RBP15.83■□□□□ 0.12
GTF3C1-208ENST00000567843 RIC3Q7Z5B4 369 aa15.83■□□□□ 0.12
GTF3C1-208ENST00000567843 TSPYL6Q8N831 410 aa15.83■□□□□ 0.12
GTF3C1-208ENST00000567843 ISCA1Q9BUE6 129 aa15.83■□□□□ 0.12
GTF3C1-208ENST00000567843 RNF123Q5XPI4 1314 aa15.83■□□□□ 0.12
GTF3C1-208ENST00000567843 SNED1Q8TER0 1413 aa15.83■□□□□ 0.12
GTF3C1-208ENST00000567843 WDR90Q96KV7 1748 aa15.82■□□□□ 0.12
GTF3C1-208ENST00000567843 FZD9O00144 591 aa15.82■□□□□ 0.12
GTF3C1-208ENST00000567843 ANP32CO43423 234 aa15.82■□□□□ 0.12
GTF3C1-208ENST00000567843 CHADLQ6NUI6 762 aa15.82■□□□□ 0.12
GTF3C1-208ENST00000567843 JARID2Q92833 1246 aaPredicted RBP15.82■□□□□ 0.12
GTF3C1-208ENST00000567843 TMX4Q9H1E5 349 aaPredicted RBP15.82■□□□□ 0.12
GTF3C1-208ENST00000567843 TAF1DQ9H5J8 278 aaPredicted RBP15.82■□□□□ 0.12
GTF3C1-208ENST00000567843 ATP6V0A2Q9Y487 856 aa15.82■□□□□ 0.12
GTF3C1-208ENST00000567843 IQCA1LA6NCM1 817 aa15.81■□□□□ 0.12
GTF3C1-208ENST00000567843 PPIP5K2O43314 1243 aa15.81■□□□□ 0.12
GTF3C1-208ENST00000567843 COL4A5P29400 1685 aa15.81■□□□□ 0.12
GTF3C1-208ENST00000567843 GOLGA2Q08379 1002 aa15.81■□□□□ 0.12
GTF3C1-208ENST00000567843 AOC3Q16853 763 aa15.81■□□□□ 0.12
GTF3C1-208ENST00000567843 DDX46Q7L014 1031 aaKnown RBP15.81■□□□□ 0.12
GTF3C1-208ENST00000567843 KLRG1Q96E93 195 aa15.81■□□□□ 0.12
GTF3C1-208ENST00000567843 L3MBTL3Q96JM7 780 aaPredicted RBP15.81■□□□□ 0.12
GTF3C1-208ENST00000567843 MYD88Q99836 296 aa15.81■□□□□ 0.12
GTF3C1-208ENST00000567843 CLEC11AQ9Y240 323 aa15.81■□□□□ 0.12
GTF3C1-208ENST00000567843 EIF6P56537 245 aaKnown RBP15.8■□□□□ 0.12
GTF3C1-208ENST00000567843 HACL1Q9UJ83 578 aa15.8■□□□□ 0.12
GTF3C1-208ENST00000567843 BBOX1O75936 387 aa15.79■□□□□ 0.12
GTF3C1-208ENST00000567843 EPHX2P34913 555 aa15.79■□□□□ 0.12
GTF3C1-208ENST00000567843 GRAPQ13588 217 aa15.79■□□□□ 0.12
GTF3C1-208ENST00000567843 DPP8Q6V1X1 898 aaPredicted RBP15.79■□□□□ 0.12
GTF3C1-208ENST00000567843 WWC1Q8IX03 1113 aa15.79■□□□□ 0.12
GTF3C1-208ENST00000567843 GRAPLQ8TC17 118 aaPredicted RBP15.79■□□□□ 0.12
GTF3C1-208ENST00000567843 IRS4O14654 1257 aaPredicted RBP15.78■□□□□ 0.12
GTF3C1-208ENST00000567843 SP8Q8IXZ3 490 aa15.78■□□□□ 0.12
GTF3C1-208ENST00000567843 NIM1KQ8IY84 436 aa15.78■□□□□ 0.12
GTF3C1-208ENST00000567843 GPC2Q8N158 579 aa15.78■□□□□ 0.12
GTF3C1-208ENST00000567843 MPNDQ8N594 471 aa15.78■□□□□ 0.12
GTF3C1-208ENST00000567843 CELF1Q92879 486 aaKnown RBP15.78■□□□□ 0.12
GTF3C1-208ENST00000567843 ANKRD36CQ5JPF3 1778 aa15.77■□□□□ 0.12
GTF3C1-208ENST00000567843 GRIPAP1Q4V328 841 aa15.77■□□□□ 0.12
GTF3C1-208ENST00000567843 CCDC30Q5VVM6 783 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms