RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 LMNB1P20700 586 aa6.25□□□□□ -1.41
CLK3-219ENST00000567805 TTLL7Q6ZT98 887 aa6.25□□□□□ -1.41
CLK3-219ENST00000567805 CCDC24Q8N4L8 307 aa6.25□□□□□ -1.41
CLK3-219ENST00000567805 NGEFQ8N5V2 710 aa6.25□□□□□ -1.41
CLK3-219ENST00000567805 MASTLQ96GX5 879 aa6.25□□□□□ -1.41
CLK3-219ENST00000567805 RNF181Q9P0P0 153 aa6.25□□□□□ -1.41
CLK3-219ENST00000567805 IBTKQ9P2D0 1353 aaPredicted RBP6.25□□□□□ -1.41
CLK3-219ENST00000567805 LAMB2P55268 1798 aa6.25□□□□□ -1.41
CLK3-219ENST00000567805 RIC1Q4ADV7 1423 aa6.25□□□□□ -1.41
CLK3-219ENST00000567805 KDM2BQ8NHM5 1336 aa6.25□□□□□ -1.41
CLK3-219ENST00000567805 SENP3-EIF4A1A0A087X0R7 540 aa6.24□□□□□ -1.41
CLK3-219ENST00000567805 ZNF316A6NFI3 1004 aaPredicted RBP6.24□□□□□ -1.41
CLK3-219ENST00000567805 APAF1O14727 1248 aa6.24□□□□□ -1.41
CLK3-219ENST00000567805 KIF3CO14782 793 aa6.24□□□□□ -1.41
CLK3-219ENST00000567805 HOXB7P09629 217 aa6.24□□□□□ -1.41
CLK3-219ENST00000567805 NPR1P16066 1061 aa6.24□□□□□ -1.41
CLK3-219ENST00000567805 EIF2S2P20042 333 aaKnown RBP6.24□□□□□ -1.41
CLK3-219ENST00000567805 GTF2E1P29083 439 aaPredicted RBP6.24□□□□□ -1.41
CLK3-219ENST00000567805 RASSF7Q02833 373 aa6.24□□□□□ -1.41
CLK3-219ENST00000567805 CALD1Q05682 793 aaKnown RBP6.24□□□□□ -1.41
CLK3-219ENST00000567805 PDIA6Q15084 440 aa6.24□□□□□ -1.41
CLK3-219ENST00000567805 LCE2DQ5TA82 110 aaPredicted RBP6.24□□□□□ -1.41
CLK3-219ENST00000567805 SOGA3Q5TF21 947 aa6.24□□□□□ -1.41
CLK3-219ENST00000567805 PRPF40BQ6NWY9 871 aaKnown RBP6.24□□□□□ -1.41
CLK3-219ENST00000567805 GIGYF2Q6Y7W6 1299 aaKnown RBP6.24□□□□□ -1.41
CLK3-219ENST00000567805 LRP10Q7Z4F1 713 aa6.24□□□□□ -1.41
CLK3-219ENST00000567805 CFAP44Q96MT7 982 aa6.24□□□□□ -1.41
CLK3-219ENST00000567805 ZBTB3Q9H5J0 574 aa6.24□□□□□ -1.41
CLK3-219ENST00000567805 LAS1LQ9Y4W2 734 aaKnown RBP6.24□□□□□ -1.41
CLK3-219ENST00000567805 UBN2Q6ZU65 1347 aa6.24□□□□□ -1.41
CLK3-219ENST00000567805 LTBP3Q9NS15 1303 aa6.24□□□□□ -1.41
CLK3-219ENST00000567805 WDR90Q96KV7 1748 aa6.23□□□□□ -1.41
CLK3-219ENST00000567805 FAM177BA6PVY3 158 aa6.23□□□□□ -1.41
CLK3-219ENST00000567805 NFKBIEO00221 500 aa6.23□□□□□ -1.41
CLK3-219ENST00000567805 C21orf2O43822 256 aa6.23□□□□□ -1.41
CLK3-219ENST00000567805 PROSER3Q2NL68 480 aa6.23□□□□□ -1.41
CLK3-219ENST00000567805 PPP1R42Q7Z4L9 355 aa6.23□□□□□ -1.41
CLK3-219ENST00000567805 ZNF34Q8IZ26 560 aa6.23□□□□□ -1.41
CLK3-219ENST00000567805 DDX21Q9NR30 783 aaKnown RBP eCLIP6.23□□□□□ -1.41
CLK3-219ENST00000567805 DDX60Q8IY21 1712 aaKnown RBP6.22□□□□□ -1.41
CLK3-219ENST00000567805 CACNA1FO60840 1977 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 ABCC12Q96J65 1359 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 GLTPD2A6NH11 291 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 ANP32CO43423 234 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 TOMM70O94826 608 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 NTSR2O95665 410 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 ANXA1P04083 346 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 ZNF853P0CG23 659 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 GPTP24298 496 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 ALDH1B1P30837 517 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 PRELPP51888 382 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 GNAI1P63096 354 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 KRT24Q2M2I5 525 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 CRY2Q49AN0 593 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 ERFEQ4G0M1 354 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 PARP10Q53GL7 1025 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 HSP90AB3PQ58FF7 597 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 HDGFL1Q5TGJ6 251 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 SUSD4Q5VX71 490 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 COPS6Q7L5N1 327 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 NUTM1Q86Y26 1132 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 C16orf71Q8IYS4 520 aaPredicted RBP6.22□□□□□ -1.41
CLK3-219ENST00000567805 C7orf43Q8WVR3 580 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 NECTIN2Q92692 538 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 TAOK3Q9H2K8 898 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 NMRK2Q9NPI5 230 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 MBIPQ9NS73 344 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 IFT57Q9NWB7 429 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 CHPF2Q9P2E5 772 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 DBF4Q9UBU7 674 aaPredicted RBP6.22□□□□□ -1.41
CLK3-219ENST00000567805 SCN4AP35499 1836 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 RNF123Q5XPI4 1314 aa6.22□□□□□ -1.41
CLK3-219ENST00000567805 PCNTO95613 3336 aa6.21□□□□□ -1.41
CLK3-219ENST00000567805 HSPA6P17066 643 aa6.21□□□□□ -1.42
CLK3-219ENST00000567805 HOXA10P31260 410 aaPredicted RBP6.21□□□□□ -1.42
CLK3-219ENST00000567805 AIMP1Q12904 312 aaKnown RBP6.21□□□□□ -1.42
CLK3-219ENST00000567805 CCDC184Q52MB2 194 aa6.21□□□□□ -1.42
CLK3-219ENST00000567805 CCDC93Q567U6 631 aa6.21□□□□□ -1.42
CLK3-219ENST00000567805 DUSP27Q5VZP5 1158 aa6.21□□□□□ -1.42
CLK3-219ENST00000567805 RTKN2Q8IZC4 609 aa6.21□□□□□ -1.42
CLK3-219ENST00000567805 RBM46Q8TBY0 533 aaKnown RBP6.21□□□□□ -1.42
CLK3-219ENST00000567805 XAGE3Q8WTP9 111 aa6.21□□□□□ -1.42
CLK3-219ENST00000567805 RPGRQ92834 1020 aaKnown RBP6.21□□□□□ -1.42
CLK3-219ENST00000567805 UTP14AQ9BVJ6 771 aaKnown RBP6.21□□□□□ -1.42
CLK3-219ENST00000567805 CHMP4AQ9BY43 222 aa6.21□□□□□ -1.42
CLK3-219ENST00000567805 HYPKQ9NX55 129 aa6.21□□□□□ -1.42
CLK3-219ENST00000567805 TAF1P21675 1872 aa6.21□□□□□ -1.42
CLK3-219ENST00000567805 SNED1Q8TER0 1413 aa6.2□□□□□ -1.42
CLK3-219ENST00000567805 VEGFAP15692 232 aaPredicted RBP6.2□□□□□ -1.42
CLK3-219ENST00000567805 FKBP4Q02790 459 aaKnown RBP eCLIP6.2□□□□□ -1.42
CLK3-219ENST00000567805 TCIRG1Q13488 830 aa6.2□□□□□ -1.42
CLK3-219ENST00000567805 CCDC27Q2M243 656 aa6.2□□□□□ -1.42
CLK3-219ENST00000567805 GRIPAP1Q4V328 841 aa6.2□□□□□ -1.42
CLK3-219ENST00000567805 SLC10A5Q5PT55 438 aa6.2□□□□□ -1.42
CLK3-219ENST00000567805 CC2D2BQ6DHV5 1058 aa6.2□□□□□ -1.42
CLK3-219ENST00000567805 DPY19L2Q6NUT2 758 aa6.2□□□□□ -1.42
CLK3-219ENST00000567805 ANKRD13DQ6ZTN6 518 aa6.2□□□□□ -1.42
CLK3-219ENST00000567805 NLRP10Q86W26 655 aa6.2□□□□□ -1.42
CLK3-219ENST00000567805 PLBD2Q8NHP8 589 aa6.2□□□□□ -1.42
CLK3-219ENST00000567805 NLRP3Q96P20 1036 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms