RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 ZNF277Q9NRM2 450 aaPredicted RBP24.28■■□□□ 1.48
LINC01238-205ENST00000567549 ABCC12Q96J65 1359 aa24.28■■□□□ 1.48
LINC01238-205ENST00000567549 POTECB2RU33 542 aa24.27■■□□□ 1.48
LINC01238-205ENST00000567549 SUSD4Q5VX71 490 aa24.27■■□□□ 1.48
LINC01238-205ENST00000567549 UTP14AQ9BVJ6 771 aaKnown RBP24.27■■□□□ 1.48
LINC01238-205ENST00000567549 UBN2Q6ZU65 1347 aa24.27■■□□□ 1.48
LINC01238-205ENST00000567549 HOXB7P09629 217 aa24.26■■□□□ 1.47
LINC01238-205ENST00000567549 NEUROD2Q15784 382 aa24.26■■□□□ 1.47
LINC01238-205ENST00000567549 LDHDQ86WU2 507 aa24.26■■□□□ 1.47
LINC01238-205ENST00000567549 SYNE4Q8N205 404 aa24.26■■□□□ 1.47
LINC01238-205ENST00000567549 NTSR2O95665 410 aa24.25■■□□□ 1.47
LINC01238-205ENST00000567549 EIF6P56537 245 aaKnown RBP24.25■■□□□ 1.47
LINC01238-205ENST00000567549 CALD1Q05682 793 aaKnown RBP24.25■■□□□ 1.47
LINC01238-205ENST00000567549 PNMA8AQ86V59 439 aaPredicted RBP24.25■■□□□ 1.47
LINC01238-205ENST00000567549 HACL1Q9UJ83 578 aa24.25■■□□□ 1.47
LINC01238-205ENST00000567549 PPEF1O14829 653 aaPredicted RBP24.24■■□□□ 1.47
LINC01238-205ENST00000567549 GPC2Q8N158 579 aa24.24■■□□□ 1.47
LINC01238-205ENST00000567549 VPS33BQ9H267 617 aa24.24■■□□□ 1.47
LINC01238-205ENST00000567549 DDX21Q9NR30 783 aaKnown RBP eCLIP24.24■■□□□ 1.47
LINC01238-205ENST00000567549 CHL1O00533 1208 aa24.23■■□□□ 1.47
LINC01238-205ENST00000567549 HTRA3P83110 453 aa24.23■■□□□ 1.47
LINC01238-205ENST00000567549 PDIA6Q15084 440 aa24.23■■□□□ 1.47
LINC01238-205ENST00000567549 CCDC146Q8IYE0 955 aa24.23■■□□□ 1.47
LINC01238-205ENST00000567549 CHMP4AQ9BY43 222 aa24.23■■□□□ 1.47
LINC01238-205ENST00000567549 LAS1LQ9Y4W2 734 aaKnown RBP24.23■■□□□ 1.47
LINC01238-205ENST00000567549 ANKRD36CQ5JPF3 1778 aa24.22■■□□□ 1.47
LINC01238-205ENST00000567549 FZD9O00144 591 aa24.22■■□□□ 1.47
LINC01238-205ENST00000567549 SUPT20HQ8NEM7 779 aa24.22■■□□□ 1.47
LINC01238-205ENST00000567549 TAF1DQ9H5J8 278 aaPredicted RBP24.22■■□□□ 1.47
LINC01238-205ENST00000567549 CREBZFQ9NS37 354 aa24.22■■□□□ 1.47
LINC01238-205ENST00000567549 SLC10A5Q5PT55 438 aa24.21■■□□□ 1.47
LINC01238-205ENST00000567549 COPS6Q7L5N1 327 aa24.21■■□□□ 1.47
LINC01238-205ENST00000567549 LMOD1P29536 600 aaPredicted RBP24.2■■□□□ 1.46
LINC01238-205ENST00000567549 AIMP1Q12904 312 aaKnown RBP24.2■■□□□ 1.46
LINC01238-205ENST00000567549 LRP10Q7Z4F1 713 aa24.2■■□□□ 1.46
LINC01238-205ENST00000567549 LARGE2Q8N3Y3 721 aa24.2■■□□□ 1.46
LINC01238-205ENST00000567549 DBF4Q9UBU7 674 aaPredicted RBP24.2■■□□□ 1.46
LINC01238-205ENST00000567549 TCIRG1Q13488 830 aa24.19■■□□□ 1.46
LINC01238-205ENST00000567549 HDGFL1Q5TGJ6 251 aa24.19■■□□□ 1.46
LINC01238-205ENST00000567549 XAGE3Q8WTP9 111 aa24.19■■□□□ 1.46
LINC01238-205ENST00000567549 CFAP44Q96MT7 982 aa24.19■■□□□ 1.46
LINC01238-205ENST00000567549 SH3TC1Q8TE82 1336 aa24.18■■□□□ 1.46
LINC01238-205ENST00000567549 ZNF541Q9H0D2 1346 aa24.18■■□□□ 1.46
LINC01238-205ENST00000567549 BBOX1O75936 387 aa24.18■■□□□ 1.46
LINC01238-205ENST00000567549 EPHX2P34913 555 aa24.18■■□□□ 1.46
LINC01238-205ENST00000567549 EAPPQ56P03 285 aaPredicted RBP24.18■■□□□ 1.46
LINC01238-205ENST00000567549 OLFM4Q6UX06 510 aa24.18■■□□□ 1.46
LINC01238-205ENST00000567549 TMC4Q7Z404 712 aa24.18■■□□□ 1.46
LINC01238-205ENST00000567549 PRKRIP1Q9H875 184 aaPredicted RBP24.18■■□□□ 1.46
LINC01238-205ENST00000567549 TRMT112Q9UI30 125 aaKnown RBP24.18■■□□□ 1.46
LINC01238-205ENST00000567549 ADAMTS8Q9UP79 889 aa24.18■■□□□ 1.46
LINC01238-205ENST00000567549 CLEC11AQ9Y240 323 aa24.18■■□□□ 1.46
LINC01238-205ENST00000567549 NIM1KQ8IY84 436 aa24.17■■□□□ 1.46
LINC01238-205ENST00000567549 NECTIN2Q92692 538 aa24.17■■□□□ 1.46
LINC01238-205ENST00000567549 HYPKQ9NX55 129 aa24.17■■□□□ 1.46
LINC01238-205ENST00000567549 ATP6V0A2Q9Y487 856 aa24.17■■□□□ 1.46
LINC01238-205ENST00000567549 HSP90B1P14625 803 aaKnown RBP24.16■■□□□ 1.46
LINC01238-205ENST00000567549 PROSER3Q2NL68 480 aa24.16■■□□□ 1.46
LINC01238-205ENST00000567549 DDX46Q7L014 1031 aaKnown RBP24.16■■□□□ 1.46
LINC01238-205ENST00000567549 NLRP10Q86W26 655 aa24.16■■□□□ 1.46
LINC01238-205ENST00000567549 PLBD2Q8NHP8 589 aa24.16■■□□□ 1.46
LINC01238-205ENST00000567549 TRIM35Q9UPQ4 493 aa24.16■■□□□ 1.46
LINC01238-205ENST00000567549 ANXA1P04083 346 aa24.15■■□□□ 1.46
LINC01238-205ENST00000567549 SNED1Q8TER0 1413 aa24.15■■□□□ 1.46
LINC01238-205ENST00000567549 CHPF2Q9P2E5 772 aa24.14■■□□□ 1.45
LINC01238-205ENST00000567549 PPIP5K2O43314 1243 aa24.13■■□□□ 1.45
LINC01238-205ENST00000567549 GNAI1P63096 354 aa24.13■■□□□ 1.45
LINC01238-205ENST00000567549 ANKRD13DQ6ZTN6 518 aa24.13■■□□□ 1.45
LINC01238-205ENST00000567549 GJA3Q9Y6H8 435 aa24.13■■□□□ 1.45
LINC01238-205ENST00000567549 TMEM88BA6NKF7 163 aa24.12■■□□□ 1.45
LINC01238-205ENST00000567549 TCERG1O14776 1098 aaKnown RBP24.12■■□□□ 1.45
LINC01238-205ENST00000567549 DPP8Q6V1X1 898 aaPredicted RBP24.12■■□□□ 1.45
LINC01238-205ENST00000567549 SP8Q8IXZ3 490 aa24.12■■□□□ 1.45
LINC01238-205ENST00000567549 ABCC4O15439 1325 aa24.11■■□□□ 1.45
LINC01238-205ENST00000567549 POTEIP0CG38 1075 aa24.11■■□□□ 1.45
LINC01238-205ENST00000567549 POTEJP0CG39 1038 aa24.11■■□□□ 1.45
LINC01238-205ENST00000567549 IFT57Q9NWB7 429 aa24.11■■□□□ 1.45
LINC01238-205ENST00000567549 PASKQ96RG2 1323 aa24.1■■□□□ 1.45
LINC01238-205ENST00000567549 GOLGA2Q08379 1002 aa24.1■■□□□ 1.45
LINC01238-205ENST00000567549 GRAPQ13588 217 aa24.1■■□□□ 1.45
LINC01238-205ENST00000567549 DUSP27Q5VZP5 1158 aa24.1■■□□□ 1.45
LINC01238-205ENST00000567549 MPNDQ8N594 471 aa24.1■■□□□ 1.45
LINC01238-205ENST00000567549 GRAPLQ8TC17 118 aaPredicted RBP24.1■■□□□ 1.45
LINC01238-205ENST00000567549 RTFDC1Q9BY42 306 aaPredicted RBP24.09■■□□□ 1.45
LINC01238-205ENST00000567549 C3orf67Q6ZVT6 689 aa24.08■■□□□ 1.45
LINC01238-205ENST00000567549 USP50Q70EL3 339 aaPredicted RBP24.08■■□□□ 1.45
LINC01238-205ENST00000567549 CNTROBQ8N137 903 aa24.08■■□□□ 1.45
LINC01238-205ENST00000567549 LAMB2P55268 1798 aa24.08■■□□□ 1.44
LINC01238-205ENST00000567549 HSPA1AP0DMV8 641 aaKnown RBP24.07■■□□□ 1.44
LINC01238-205ENST00000567549 HSPA1BP0DMV9 641 aaKnown RBP24.07■■□□□ 1.44
LINC01238-205ENST00000567549 HCLS1P14317 486 aaPredicted RBP24.07■■□□□ 1.44
LINC01238-205ENST00000567549 KRT24Q2M2I5 525 aa24.07■■□□□ 1.44
LINC01238-205ENST00000567549 MBIPQ9NS73 344 aa24.07■■□□□ 1.44
LINC01238-205ENST00000567549 MKRN1Q9UHC7 482 aaKnown RBP24.07■■□□□ 1.44
LINC01238-205ENST00000567549 ZNRF3Q9ULT6 936 aa24.07■■□□□ 1.44
LINC01238-205ENST00000567549 CDHR2Q9BYE9 1310 aa24.07■■□□□ 1.44
LINC01238-205ENST00000567549 ADAMTSL1Q8N6G6 1762 aa24.06■■□□□ 1.44
LINC01238-205ENST00000567549 CNTNAP1P78357 1384 aa24.06■■□□□ 1.44
LINC01238-205ENST00000567549 TNIP1Q15025 636 aa24.06■■□□□ 1.44
LINC01238-205ENST00000567549 AOC3Q16853 763 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms