RNA–Protein interactions for RNA: ENST00000567010.1

CDR2-205, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 2

Gene CDR2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-205ENST00000567010 GLI3P10071 1580 aa6.63□□□□□ -1.35
CDR2-205ENST00000567010 PTPREP23469 700 aa6.63□□□□□ -1.35
CDR2-205ENST00000567010 ATP6V1AP38606 617 aa6.63□□□□□ -1.35
CDR2-205ENST00000567010 PDE4DQ08499 809 aa6.63□□□□□ -1.35
CDR2-205ENST00000567010 TEX13AQ9BXU3 409 aaPredicted RBP6.63□□□□□ -1.35
CDR2-205ENST00000567010 CHMP4AQ9BY43 222 aa6.63□□□□□ -1.35
CDR2-205ENST00000567010 RCAN3Q9UKA8 241 aa6.63□□□□□ -1.35
CDR2-205ENST00000567010 SUPT16HQ9Y5B9 1047 aaKnown RBP6.63□□□□□ -1.35
CDR2-205ENST00000567010 FAM205CA6NFA0 338 aa6.62□□□□□ -1.35
CDR2-205ENST00000567010 BCAR3O75815 825 aa6.62□□□□□ -1.35
CDR2-205ENST00000567010 STARD3NLO95772 234 aa6.62□□□□□ -1.35
CDR2-205ENST00000567010 RARSP54136 660 aaKnown RBP6.62□□□□□ -1.35
CDR2-205ENST00000567010 KCNQ4P56696 695 aa6.62□□□□□ -1.35
CDR2-205ENST00000567010 TMEM132AQ24JP5 1023 aa6.62□□□□□ -1.35
CDR2-205ENST00000567010 CCDC30Q5VVM6 783 aa6.62□□□□□ -1.35
CDR2-205ENST00000567010 DNAJC10Q8IXB1 793 aa6.62□□□□□ -1.35
CDR2-205ENST00000567010 SSH1Q8WYL5 1049 aa6.62□□□□□ -1.35
CDR2-205ENST00000567010 TNS2Q63HR2 1409 aa6.61□□□□□ -1.35
CDR2-205ENST00000567010 LOC102724428A0A0B4J2F2 783 aa6.61□□□□□ -1.35
CDR2-205ENST00000567010 A1BGP04217 495 aa6.61□□□□□ -1.35
CDR2-205ENST00000567010 CT47B1P0C2W7 299 aaPredicted RBP6.61□□□□□ -1.35
CDR2-205ENST00000567010 PRSS12P56730 875 aa6.61□□□□□ -1.35
CDR2-205ENST00000567010 SIK1P57059 783 aa6.61□□□□□ -1.35
CDR2-205ENST00000567010 SF3B2Q13435 895 aaKnown RBP6.61□□□□□ -1.35
CDR2-205ENST00000567010 FRAT1Q92837 279 aaPredicted RBP6.61□□□□□ -1.35
CDR2-205ENST00000567010 SLC4A9Q96Q91 983 aa6.61□□□□□ -1.35
CDR2-205ENST00000567010 ARXQ96QS3 562 aa6.61□□□□□ -1.35
CDR2-205ENST00000567010 DAXXQ9UER7 740 aaPredicted RBP6.61□□□□□ -1.35
CDR2-205ENST00000567010 DLG5Q8TDM6 1919 aa6.6□□□□□ -1.35
CDR2-205ENST00000567010 BCL9O00512 1426 aa6.6□□□□□ -1.35
CDR2-205ENST00000567010 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.6□□□□□ -1.35
CDR2-205ENST00000567010 PLSCR1O15162 318 aa6.6□□□□□ -1.35
CDR2-205ENST00000567010 PLIN1O60240 522 aa6.6□□□□□ -1.35
CDR2-205ENST00000567010 CYP19A1P11511 503 aaPredicted RBP6.6□□□□□ -1.35
CDR2-205ENST00000567010 MYL6BP14649 208 aa6.6□□□□□ -1.35
CDR2-205ENST00000567010 CANXP27824 592 aaKnown RBP6.6□□□□□ -1.35
CDR2-205ENST00000567010 PIP4K2AP48426 406 aaPredicted RBP6.6□□□□□ -1.35
CDR2-205ENST00000567010 ALDH1L2Q3SY69 923 aa6.6□□□□□ -1.35
CDR2-205ENST00000567010 HDGFL1Q5TGJ6 251 aa6.6□□□□□ -1.35
CDR2-205ENST00000567010 PADI6Q6TGC4 694 aa6.6□□□□□ -1.35
CDR2-205ENST00000567010 MRPL50Q8N5N7 158 aaKnown RBP6.6□□□□□ -1.35
CDR2-205ENST00000567010 BCL2L13Q9BXK5 485 aa6.6□□□□□ -1.35
CDR2-205ENST00000567010 STK31Q9BXU1 1019 aa6.6□□□□□ -1.35
CDR2-205ENST00000567010 SMC4Q9NTJ3 1288 aa6.6□□□□□ -1.35
CDR2-205ENST00000567010 CCNL1Q9UK58 526 aaPredicted RBP6.6□□□□□ -1.35
CDR2-205ENST00000567010 NOB1Q9ULX3 412 aaKnown RBP6.6□□□□□ -1.35
CDR2-205ENST00000567010 PARP4Q9UKK3 1724 aaKnown RBP6.59□□□□□ -1.35
CDR2-205ENST00000567010 HEG1Q9ULI3 1381 aa6.59□□□□□ -1.35
CDR2-205ENST00000567010 IPO8O15397 1037 aaKnown RBP6.59□□□□□ -1.35
CDR2-205ENST00000567010 ANXA1P04083 346 aa6.59□□□□□ -1.35
CDR2-205ENST00000567010 OATP04181 439 aa6.59□□□□□ -1.35
CDR2-205ENST00000567010 COL9A1P20849 921 aa6.59□□□□□ -1.35
CDR2-205ENST00000567010 AIMP1Q12904 312 aaKnown RBP6.59□□□□□ -1.35
CDR2-205ENST00000567010 ITPK1Q13572 414 aa6.59□□□□□ -1.35
CDR2-205ENST00000567010 TXNRD1Q16881 649 aa6.59□□□□□ -1.35
CDR2-205ENST00000567010 COPS6Q7L5N1 327 aa6.59□□□□□ -1.35
CDR2-205ENST00000567010 G2E3Q7L622 706 aa6.59□□□□□ -1.35
CDR2-205ENST00000567010 CCDC125Q86Z20 511 aa6.59□□□□□ -1.35
CDR2-205ENST00000567010 ZNF428Q96B54 188 aa6.59□□□□□ -1.35
CDR2-205ENST00000567010 PHAXQ9H814 394 aaKnown RBP6.59□□□□□ -1.35
CDR2-205ENST00000567010 HYPKQ9NX55 129 aa6.59□□□□□ -1.35
CDR2-205ENST00000567010 DBF4Q9UBU7 674 aaPredicted RBP6.59□□□□□ -1.35
CDR2-205ENST00000567010 ADGRG1Q9Y653 693 aa6.59□□□□□ -1.35
CDR2-205ENST00000567010 RGS12O14924 1447 aa6.59□□□□□ -1.36
CDR2-205ENST00000567010 SOS1Q07889 1333 aaPredicted RBP6.58□□□□□ -1.36
CDR2-205ENST00000567010 NBPF26B4DH59 902 aa6.58□□□□□ -1.36
CDR2-205ENST00000567010 HOXB7P09629 217 aa6.58□□□□□ -1.36
CDR2-205ENST00000567010 PBX2P40425 430 aa6.58□□□□□ -1.36
CDR2-205ENST00000567010 EZH2Q15910 746 aaKnown RBP6.58□□□□□ -1.36
CDR2-205ENST00000567010 PROSER3Q2NL68 480 aa6.58□□□□□ -1.36
CDR2-205ENST00000567010 NBPF14Q5TI25 921 aa6.58□□□□□ -1.36
CDR2-205ENST00000567010 NBPF10Q6P3W6 841 aaKnown RBP6.58□□□□□ -1.36
CDR2-205ENST00000567010 INTS5Q6P9B9 1019 aaKnown RBP6.58□□□□□ -1.36
CDR2-205ENST00000567010 ILDR2Q71H61 639 aa6.58□□□□□ -1.36
CDR2-205ENST00000567010 NPM2Q86SE8 214 aaKnown RBP6.58□□□□□ -1.36
CDR2-205ENST00000567010 NBPF15Q8N660 670 aa6.58□□□□□ -1.36
CDR2-205ENST00000567010 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.58□□□□□ -1.36
CDR2-205ENST00000567010 KDM4CQ9H3R0 1056 aa6.58□□□□□ -1.36
CDR2-205ENST00000567010 DDX21Q9NR30 783 aaKnown RBP eCLIP6.58□□□□□ -1.36
CDR2-205ENST00000567010 LRRC4BQ9NT99 713 aa6.58□□□□□ -1.36
CDR2-205ENST00000567010 CHPF2Q9P2E5 772 aa6.58□□□□□ -1.36
CDR2-205ENST00000567010 ZNF330Q9Y3S2 320 aaPredicted RBP6.58□□□□□ -1.36
CDR2-205ENST00000567010 PKD1L3Q7Z443 1732 aa6.58□□□□□ -1.36
CDR2-205ENST00000567010 PALLDQ8WX93 1383 aa6.57□□□□□ -1.36
CDR2-205ENST00000567010 HMGB2P26583 209 aaKnown RBP6.57□□□□□ -1.36
CDR2-205ENST00000567010 SLC27A3Q5K4L6 730 aa6.57□□□□□ -1.36
CDR2-205ENST00000567010 VARS2Q5ST30 1063 aaKnown RBP6.57□□□□□ -1.36
CDR2-205ENST00000567010 RC3H1Q5TC82 1133 aaKnown RBP6.57□□□□□ -1.36
CDR2-205ENST00000567010 ZKSCAN2Q63HK3 967 aa6.57□□□□□ -1.36
CDR2-205ENST00000567010 ANKRD13DQ6ZTN6 518 aa6.57□□□□□ -1.36
CDR2-205ENST00000567010 SMIM5Q71RC9 77 aa6.57□□□□□ -1.36
CDR2-205ENST00000567010 DEFB132Q7Z7B7 95 aa6.57□□□□□ -1.36
CDR2-205ENST00000567010 METTL3Q86U44 580 aaKnown RBP6.57□□□□□ -1.36
CDR2-205ENST00000567010 PARP9Q8IXQ6 854 aa6.57□□□□□ -1.36
CDR2-205ENST00000567010 LINC00116Q8NCU8 138 aa6.57□□□□□ -1.36
CDR2-205ENST00000567010 PXYLP1Q8TE99 480 aa6.57□□□□□ -1.36
CDR2-205ENST00000567010 CAMKK2Q96RR4 588 aa6.57□□□□□ -1.36
CDR2-205ENST00000567010 SLC4A5Q9BY07 1137 aa6.57□□□□□ -1.36
CDR2-205ENST00000567010 BRWD3Q6RI45 1802 aa6.57□□□□□ -1.36
CDR2-205ENST00000567010 SCN11AQ9UI33 1791 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms