RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 C1orf216Q8TAB5 229 aa4.79□□□□□ -1.64
HERPUD1-211ENST00000566550 LNPKQ9C0E8 428 aa4.79□□□□□ -1.64
HERPUD1-211ENST00000566550 CCSER2Q9H7U1 834 aa4.79□□□□□ -1.64
HERPUD1-211ENST00000566550 CAPN10Q9HC96 672 aa4.79□□□□□ -1.64
HERPUD1-211ENST00000566550 GPAMQ9HCL2 828 aa4.79□□□□□ -1.64
HERPUD1-211ENST00000566550 ZFP64Q9NPA5 681 aa4.79□□□□□ -1.64
HERPUD1-211ENST00000566550 GGA1Q9UJY5 639 aa4.79□□□□□ -1.64
HERPUD1-211ENST00000566550 TMA7Q9Y2S6 64 aaKnown RBP4.79□□□□□ -1.64
HERPUD1-211ENST00000566550 SPDYE3A6NKU9 549 aa4.78□□□□□ -1.64
HERPUD1-211ENST00000566550 SFI1A8K8P3 1242 aa4.78□□□□□ -1.64
HERPUD1-211ENST00000566550 LZTS3O60299 673 aaPredicted RBP4.78□□□□□ -1.64
HERPUD1-211ENST00000566550 ATP1A2P50993 1020 aa4.78□□□□□ -1.64
HERPUD1-211ENST00000566550 MCCD1P59942 119 aaPredicted RBP4.78□□□□□ -1.64
HERPUD1-211ENST00000566550 ERVK-9P63128 1117 aa4.78□□□□□ -1.64
HERPUD1-211ENST00000566550 OXLD1Q5BKU9 147 aa4.78□□□□□ -1.64
HERPUD1-211ENST00000566550 GNASQ5JWF2 1037 aa4.78□□□□□ -1.64
HERPUD1-211ENST00000566550 TRIM50Q86XT4 487 aa4.78□□□□□ -1.64
HERPUD1-211ENST00000566550 NT5DC4Q86YG4 428 aa4.78□□□□□ -1.64
HERPUD1-211ENST00000566550 TMEM87AQ8NBN3 555 aa4.78□□□□□ -1.64
HERPUD1-211ENST00000566550 PMFBP1Q8TBY8 1022 aa4.78□□□□□ -1.64
HERPUD1-211ENST00000566550 TMC1Q8TDI8 760 aa4.78□□□□□ -1.64
HERPUD1-211ENST00000566550 HINFPQ9BQA5 517 aa4.78□□□□□ -1.64
HERPUD1-211ENST00000566550 MRS2Q9HD23 443 aa4.78□□□□□ -1.64
HERPUD1-211ENST00000566550 CEP126Q9P2H0 1117 aa4.78□□□□□ -1.64
HERPUD1-211ENST00000566550 PRKAG2Q9UGJ0 569 aa4.78□□□□□ -1.64
HERPUD1-211ENST00000566550 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.78□□□□□ -1.64
HERPUD1-211ENST00000566550 KIAA1024Q9UPX6 916 aa4.78□□□□□ -1.64
HERPUD1-211ENST00000566550 NOD1Q9Y239 953 aa4.78□□□□□ -1.64
HERPUD1-211ENST00000566550 GIGYF1O75420 1035 aaPredicted RBP4.77□□□□□ -1.65
HERPUD1-211ENST00000566550 ARAFP10398 606 aa4.77□□□□□ -1.65
HERPUD1-211ENST00000566550 EPXP11678 715 aa4.77□□□□□ -1.65
HERPUD1-211ENST00000566550 FGFR3P22607 806 aa4.77□□□□□ -1.65
HERPUD1-211ENST00000566550 XPCQ01831 940 aaPredicted RBP4.77□□□□□ -1.65
HERPUD1-211ENST00000566550 RAD51AP2Q09MP3 1159 aa4.77□□□□□ -1.65
HERPUD1-211ENST00000566550 OCLNQ16625 522 aa4.77□□□□□ -1.65
HERPUD1-211ENST00000566550 ARTNQ5T4W7 220 aa4.77□□□□□ -1.65
HERPUD1-211ENST00000566550 TMEM214Q6NUQ4 689 aaKnown RBP4.77□□□□□ -1.65
HERPUD1-211ENST00000566550 RGL4Q8IZJ4 473 aa4.77□□□□□ -1.65
HERPUD1-211ENST00000566550 FAM9AQ8IZU1 332 aaPredicted RBP4.77□□□□□ -1.65
HERPUD1-211ENST00000566550 TPCN2Q8NHX9 752 aa4.77□□□□□ -1.65
HERPUD1-211ENST00000566550 ZSCAN10Q96SZ4 725 aaPredicted RBP4.77□□□□□ -1.65
HERPUD1-211ENST00000566550 MARCH6O60337 910 aa4.76□□□□□ -1.65
HERPUD1-211ENST00000566550 APBA3O96018 575 aa4.76□□□□□ -1.65
HERPUD1-211ENST00000566550 SPATA31C1P0DKV0 1188 aa4.76□□□□□ -1.65
HERPUD1-211ENST00000566550 ATP2B1P20020 1258 aa4.76□□□□□ -1.65
HERPUD1-211ENST00000566550 DNAJA1P31689 397 aaKnown RBP4.76□□□□□ -1.65
HERPUD1-211ENST00000566550 MAPK8P45983 427 aa4.76□□□□□ -1.65
HERPUD1-211ENST00000566550 PHKA2P46019 1235 aa4.76□□□□□ -1.65
HERPUD1-211ENST00000566550 DGKGP49619 791 aa4.76□□□□□ -1.65
HERPUD1-211ENST00000566550 SEC13P55735 322 aa4.76□□□□□ -1.65
HERPUD1-211ENST00000566550 GTF2IP78347 998 aa4.76□□□□□ -1.65
HERPUD1-211ENST00000566550 ARHGAP4P98171 946 aa4.76□□□□□ -1.65
HERPUD1-211ENST00000566550 MRPL58Q14197 206 aaKnown RBP4.76□□□□□ -1.65
HERPUD1-211ENST00000566550 FIGNL1Q6PIW4 674 aa4.76□□□□□ -1.65
HERPUD1-211ENST00000566550 CAPN12Q6ZSI9 719 aa4.76□□□□□ -1.65
HERPUD1-211ENST00000566550 GAS2L2Q8NHY3 880 aa4.76□□□□□ -1.65
HERPUD1-211ENST00000566550 TINF2Q9BSI4 451 aa4.76□□□□□ -1.65
HERPUD1-211ENST00000566550 VTI1BQ9UEU0 232 aa4.76□□□□□ -1.65
HERPUD1-211ENST00000566550 DOLKQ9UPQ8 538 aa4.76□□□□□ -1.65
HERPUD1-211ENST00000566550 NEURL1BA8MQ27 555 aa4.75□□□□□ -1.65
HERPUD1-211ENST00000566550 GNRH1P01148 92 aa4.75□□□□□ -1.65
HERPUD1-211ENST00000566550 FKBP4Q02790 459 aaKnown RBP eCLIP4.75□□□□□ -1.65
HERPUD1-211ENST00000566550 NAA30Q147X3 362 aaPredicted RBP4.75□□□□□ -1.65
HERPUD1-211ENST00000566550 CCDC144BQ3MJ40 725 aa4.75□□□□□ -1.65
HERPUD1-211ENST00000566550 TSGA10IPQ3SY00 556 aa4.75□□□□□ -1.65
HERPUD1-211ENST00000566550 PRRT3Q5FWE3 981 aa4.75□□□□□ -1.65
HERPUD1-211ENST00000566550 CCDC102BQ68D86 513 aa4.75□□□□□ -1.65
HERPUD1-211ENST00000566550 CHSY3Q70JA7 882 aa4.75□□□□□ -1.65
HERPUD1-211ENST00000566550 TMC7Q7Z402 723 aa4.75□□□□□ -1.65
HERPUD1-211ENST00000566550 NOP9Q86U38 636 aaKnown RBP4.75□□□□□ -1.65
HERPUD1-211ENST00000566550 LARGE2Q8N3Y3 721 aa4.75□□□□□ -1.65
HERPUD1-211ENST00000566550 ACBD3Q9H3P7 528 aa4.75□□□□□ -1.65
HERPUD1-211ENST00000566550 ARHGEF10LQ9HCE6 1279 aa4.75□□□□□ -1.65
HERPUD1-211ENST00000566550 LDHBP07195 334 aaKnown RBP4.74□□□□□ -1.65
HERPUD1-211ENST00000566550 HOXB4P17483 251 aaPredicted RBP4.74□□□□□ -1.65
HERPUD1-211ENST00000566550 ITGB7P26010 798 aa4.74□□□□□ -1.65
HERPUD1-211ENST00000566550 ADH6P28332 368 aa4.74□□□□□ -1.65
HERPUD1-211ENST00000566550 TNNI2P48788 182 aa4.74□□□□□ -1.65
HERPUD1-211ENST00000566550 CENPCQ03188 943 aa4.74□□□□□ -1.65
HERPUD1-211ENST00000566550 SF3B2Q13435 895 aaKnown RBP4.74□□□□□ -1.65
HERPUD1-211ENST00000566550 FKBP5Q13451 457 aaPredicted RBP4.74□□□□□ -1.65
HERPUD1-211ENST00000566550 MAP7D1Q3KQU3 841 aa4.74□□□□□ -1.65
HERPUD1-211ENST00000566550 SIX5Q8N196 739 aa4.74□□□□□ -1.65
HERPUD1-211ENST00000566550 MICAL1Q8TDZ2 1067 aa4.74□□□□□ -1.65
HERPUD1-211ENST00000566550 CNKSR1Q969H4 720 aa4.74□□□□□ -1.65
HERPUD1-211ENST00000566550 ABHD17AQ96GS6 310 aa4.74□□□□□ -1.65
HERPUD1-211ENST00000566550 DUSP9Q99956 384 aaKnown RBP4.74□□□□□ -1.65
HERPUD1-211ENST00000566550 ESYT1Q9BSJ8 1104 aa4.74□□□□□ -1.65
HERPUD1-211ENST00000566550 PLVAPQ9BX97 442 aa4.74□□□□□ -1.65
HERPUD1-211ENST00000566550 RUBCNLQ9H714 662 aa4.74□□□□□ -1.65
HERPUD1-211ENST00000566550 RNF19AQ9NV58 838 aa4.74□□□□□ -1.65
HERPUD1-211ENST00000566550 PCDHB11Q9Y5F2 797 aa4.74□□□□□ -1.65
HERPUD1-211ENST00000566550 C2CD2LO14523 706 aa4.73□□□□□ -1.65
HERPUD1-211ENST00000566550 NDUFB5O43674 189 aa4.73□□□□□ -1.65
HERPUD1-211ENST00000566550 MYCP01106 439 aaPredicted RBP4.73□□□□□ -1.65
HERPUD1-211ENST00000566550 BRD2P25440 801 aaKnown RBP4.73□□□□□ -1.65
HERPUD1-211ENST00000566550 MSX1P28360 303 aa4.73□□□□□ -1.65
HERPUD1-211ENST00000566550 CTBSQ01459 385 aa4.73□□□□□ -1.65
HERPUD1-211ENST00000566550 PSMD2Q13200 908 aa4.73□□□□□ -1.65
HERPUD1-211ENST00000566550 GNL2Q13823 731 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms