RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 SSFA2P28290 1259 aa15.68■□□□□ 0.1
CX3CL1-204ENST00000565912 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.68■□□□□ 0.1
CX3CL1-204ENST00000565912 MICU3Q86XE3 530 aa15.68■□□□□ 0.1
CX3CL1-204ENST00000565912 ADGRF5Q8IZF2 1346 aa15.67■□□□□ 0.1
CX3CL1-204ENST00000565912 NOP2P46087 812 aaKnown RBP15.67■□□□□ 0.1
CX3CL1-204ENST00000565912 ALS2CR12Q96Q35 445 aa15.67■□□□□ 0.1
CX3CL1-204ENST00000565912 DENND4BO75064 1496 aaPredicted RBP15.67■□□□□ 0.1
CX3CL1-204ENST00000565912 HLA-DOAP06340 250 aa15.67■□□□□ 0.1
CX3CL1-204ENST00000565912 GJB2P29033 226 aa15.67■□□□□ 0.1
CX3CL1-204ENST00000565912 IDI1Q13907 227 aa15.67■□□□□ 0.1
CX3CL1-204ENST00000565912 TAOK3Q9H2K8 898 aa15.67■□□□□ 0.1
CX3CL1-204ENST00000565912 UBA7P41226 1012 aa15.67■□□□□ 0.1
CX3CL1-204ENST00000565912 FLIIQ13045 1269 aa15.67■□□□□ 0.1
CX3CL1-204ENST00000565912 ISM2Q6H9L7 571 aa15.67■□□□□ 0.1
CX3CL1-204ENST00000565912 MFSD6Q6ZSS7 791 aa15.67■□□□□ 0.1
CX3CL1-204ENST00000565912 TMC6Q7Z403 805 aa15.67■□□□□ 0.1
CX3CL1-204ENST00000565912 ECHDC1Q9NTX5 307 aa15.67■□□□□ 0.1
CX3CL1-204ENST00000565912 PLEKHH1Q9ULM0 1364 aa15.67■□□□□ 0.1
CX3CL1-204ENST00000565912 STXBP4Q6ZWJ1 553 aa15.66■□□□□ 0.1
CX3CL1-204ENST00000565912 GDPD2Q9HCC8 539 aa15.66■□□□□ 0.1
CX3CL1-204ENST00000565912 CWC25Q9NXE8 425 aaPredicted RBP15.66■□□□□ 0.1
CX3CL1-204ENST00000565912 USP25Q9UHP3 1055 aa15.66■□□□□ 0.1
CX3CL1-204ENST00000565912 AMOTL2Q9Y2J4 779 aa15.66■□□□□ 0.1
CX3CL1-204ENST00000565912 C20orf194Q5TEA3 1177 aa15.66■□□□□ 0.1
CX3CL1-204ENST00000565912 SLC26A6Q9BXS9 759 aa15.66■□□□□ 0.1
CX3CL1-204ENST00000565912 MMRN2Q9H8L6 949 aa15.66■□□□□ 0.1
CX3CL1-204ENST00000565912 THOC2Q8NI27 1593 aaKnown RBP15.66■□□□□ 0.1
CX3CL1-204ENST00000565912 RNF187Q5TA31 235 aaPredicted RBP15.66■□□□□ 0.1
CX3CL1-204ENST00000565912 SKAP1Q86WV1 359 aa15.66■□□□□ 0.1
CX3CL1-204ENST00000565912 METAP2P50579 478 aaKnown RBP eCLIP15.65■□□□□ 0.1
CX3CL1-204ENST00000565912 JARID2Q92833 1246 aaPredicted RBP15.65■□□□□ 0.1
CX3CL1-204ENST00000565912 DDX19AQ9NUU7 478 aaKnown RBP15.65■□□□□ 0.1
CX3CL1-204ENST00000565912 ORC3Q9UBD5 711 aaPredicted RBP15.65■□□□□ 0.1
CX3CL1-204ENST00000565912 TTC21AQ8NDW8 1320 aa15.65■□□□□ 0.1
CX3CL1-204ENST00000565912 BICD1Q96G01 975 aa15.65■□□□□ 0.1
CX3CL1-204ENST00000565912 ABCC11Q96J66 1382 aa15.65■□□□□ 0.1
CX3CL1-204ENST00000565912 FAM135AQ9P2D6 1515 aa15.65■□□□□ 0.1
CX3CL1-204ENST00000565912 NAA15Q9BXJ9 866 aaKnown RBP15.65■□□□□ 0.1
CX3CL1-204ENST00000565912 HOMER2Q9NSB8 354 aa15.65■□□□□ 0.1
CX3CL1-204ENST00000565912 MYO1BO43795 1136 aa15.65■□□□□ 0.1
CX3CL1-204ENST00000565912 UBE3BQ7Z3V4 1068 aa15.65■□□□□ 0.1
CX3CL1-204ENST00000565912 POLR3GO15318 223 aaPredicted RBP15.64■□□□□ 0.09
CX3CL1-204ENST00000565912 RFC4P35249 363 aa15.64■□□□□ 0.09
CX3CL1-204ENST00000565912 PPP1R42Q7Z4L9 355 aa15.64■□□□□ 0.09
CX3CL1-204ENST00000565912 FAM114A1Q8IWE2 563 aa15.64■□□□□ 0.09
CX3CL1-204ENST00000565912 CEP63Q96MT8 703 aa15.64■□□□□ 0.09
CX3CL1-204ENST00000565912 TEX13AQ9BXU3 409 aaPredicted RBP15.64■□□□□ 0.09
CX3CL1-204ENST00000565912 STX1AQ16623 288 aa15.64■□□□□ 0.09
CX3CL1-204ENST00000565912 C16orf45Q96MC5 204 aaPredicted RBP15.64■□□□□ 0.09
CX3CL1-204ENST00000565912 IFNL2Q8IZJ0 200 aa15.63■□□□□ 0.09
CX3CL1-204ENST00000565912 NCOA7Q8NI08 942 aa15.63■□□□□ 0.09
CX3CL1-204ENST00000565912 CBX1P83916 185 aa15.63■□□□□ 0.09
CX3CL1-204ENST00000565912 CCDC174Q6PII3 467 aa15.63■□□□□ 0.09
CX3CL1-204ENST00000565912 NEK1Q96PY6 1258 aa15.63■□□□□ 0.09
CX3CL1-204ENST00000565912 KRT28Q7Z3Y7 464 aa15.63■□□□□ 0.09
CX3CL1-204ENST00000565912 TTC16Q8NEE8 873 aa15.63■□□□□ 0.09
CX3CL1-204ENST00000565912 PTPRCP08575 1304 aa15.63■□□□□ 0.09
CX3CL1-204ENST00000565912 TBCAO75347 108 aaKnown RBP15.63■□□□□ 0.09
CX3CL1-204ENST00000565912 STX8Q9UNK0 236 aa15.63■□□□□ 0.09
CX3CL1-204ENST00000565912 FSD2A1L4K1 749 aa15.62■□□□□ 0.09
CX3CL1-204ENST00000565912 STX6O43752 255 aa15.62■□□□□ 0.09
CX3CL1-204ENST00000565912 CCDC175P0C221 793 aa15.62■□□□□ 0.09
CX3CL1-204ENST00000565912 CA8P35219 290 aa15.62■□□□□ 0.09
CX3CL1-204ENST00000565912 MAPK8IP2Q13387 824 aaPredicted RBP15.62■□□□□ 0.09
CX3CL1-204ENST00000565912 GRIPAP1Q4V328 841 aa15.62■□□□□ 0.09
CX3CL1-204ENST00000565912 GIMAP7Q8NHV1 300 aa15.62■□□□□ 0.09
CX3CL1-204ENST00000565912 PABPN1LA6NDY0 278 aaKnown RBP15.62■□□□□ 0.09
CX3CL1-204ENST00000565912 WASLO00401 505 aaPredicted RBP15.62■□□□□ 0.09
CX3CL1-204ENST00000565912 TSHZ3Q63HK5 1081 aa15.62■□□□□ 0.09
CX3CL1-204ENST00000565912 TNPO1Q92973 898 aaKnown RBP15.62■□□□□ 0.09
CX3CL1-204ENST00000565912 CRNKL1Q9BZJ0 848 aaKnown RBP15.62■□□□□ 0.09
CX3CL1-204ENST00000565912 LMAN1P49257 510 aa15.62■□□□□ 0.09
CX3CL1-204ENST00000565912 GSDMDP57764 484 aa15.61■□□□□ 0.09
CX3CL1-204ENST00000565912 MAATS1Q7Z4T9 603 aa15.61■□□□□ 0.09
CX3CL1-204ENST00000565912 JADE2Q9NQC1 790 aa15.61■□□□□ 0.09
CX3CL1-204ENST00000565912 ACTN2P35609 894 aa15.61■□□□□ 0.09
CX3CL1-204ENST00000565912 CCDC102BQ68D86 513 aa15.61■□□□□ 0.09
CX3CL1-204ENST00000565912 FERMT1Q9BQL6 677 aa15.61■□□□□ 0.09
CX3CL1-204ENST00000565912 PI4KAP2A4QPH2 592 aa15.61■□□□□ 0.09
CX3CL1-204ENST00000565912 PI4KAP1Q8N8J0 262 aa15.61■□□□□ 0.09
CX3CL1-204ENST00000565912 C11orf95C9JLR9 678 aaPredicted RBP15.61■□□□□ 0.09
CX3CL1-204ENST00000565912 TRIM27P14373 513 aa15.61■□□□□ 0.09
CX3CL1-204ENST00000565912 NBPF6Q5VWK0 638 aa15.61■□□□□ 0.09
CX3CL1-204ENST00000565912 NBPF5PQ86XG9 351 aaPredicted RBP15.61■□□□□ 0.09
CX3CL1-204ENST00000565912 TRIM47Q96LD4 638 aa15.61■□□□□ 0.09
CX3CL1-204ENST00000565912 NBPF4Q96M43 638 aa15.61■□□□□ 0.09
CX3CL1-204ENST00000565912 MPHOSPH6Q99547 160 aaKnown RBP15.61■□□□□ 0.09
CX3CL1-204ENST00000565912 PYM1Q9BRP8 204 aaKnown RBP15.61■□□□□ 0.09
CX3CL1-204ENST00000565912 NOS1P29475 1434 aa15.61■□□□□ 0.09
CX3CL1-204ENST00000565912 ST5P78524 1137 aa15.6■□□□□ 0.09
CX3CL1-204ENST00000565912 SMARCC1Q92922 1105 aaPredicted RBP15.6■□□□□ 0.09
CX3CL1-204ENST00000565912 EXOC1Q9NV70 894 aa15.6■□□□□ 0.09
CX3CL1-204ENST00000565912 DHX29Q7Z478 1369 aaKnown RBP15.6■□□□□ 0.09
CX3CL1-204ENST00000565912 KANK3Q6NY19 840 aa15.6■□□□□ 0.09
CX3CL1-204ENST00000565912 LRRC27Q9C0I9 530 aa15.6■□□□□ 0.09
CX3CL1-204ENST00000565912 NKTRP30414 1462 aaKnown RBP15.6■□□□□ 0.09
CX3CL1-204ENST00000565912 GPATCH8Q9UKJ3 1502 aaKnown RBP15.6■□□□□ 0.09
CX3CL1-204ENST00000565912 RAPGEF6Q8TEU7 1601 aa15.6■□□□□ 0.09
CX3CL1-204ENST00000565912 NEMFO60524 1076 aa15.6■□□□□ 0.09
CX3CL1-204ENST00000565912 TSNARE1Q96NA8 513 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms