RNA–Protein interactions for RNA: ENST00000565684.5

KIFC3-223, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-223	ENST00000565684	C3orf67	Q6ZVT6	689 aa		29.44	■■■□□ 2.3
KIFC3-223	ENST00000565684	PPP1R42	Q7Z4L9	355 aa		29.44	■■■□□ 2.3
KIFC3-223	ENST00000565684	MRS2	Q9HD23	443 aa		29.44	■■■□□ 2.3
KIFC3-223	ENST00000565684	DBF4	Q9UBU7	674 aa	Predicted RBP	29.44	■■■□□ 2.3
KIFC3-223	ENST00000565684	DDX60	Q8IY21	1712 aa	Known RBP	29.43	■■■□□ 2.3
KIFC3-223	ENST00000565684	WDR90	Q96KV7	1748 aa		29.43	■■■□□ 2.3
KIFC3-223	ENST00000565684	CCDC93	Q567U6	631 aa		29.43	■■■□□ 2.3
KIFC3-223	ENST00000565684	TOMM70	O94826	608 aa		29.42	■■■□□ 2.3
KIFC3-223	ENST00000565684	GLTPD2	A6NH11	291 aa		29.41	■■■□□ 2.3
KIFC3-223	ENST00000565684	ALDH1B1	P30837	517 aa		29.41	■■■□□ 2.3
KIFC3-223	ENST00000565684	HOXA10	P31260	410 aa	Predicted RBP	29.41	■■■□□ 2.3
KIFC3-223	ENST00000565684	TCIRG1	Q13488	830 aa		29.41	■■■□□ 2.3
KIFC3-223	ENST00000565684	HSP90AB3P	Q58FF7	597 aa		29.41	■■■□□ 2.3
KIFC3-223	ENST00000565684	NLRP10	Q86W26	655 aa		29.41	■■■□□ 2.3
KIFC3-223	ENST00000565684	RRAGC	Q9HB90	399 aa		29.41	■■■□□ 2.3
KIFC3-223	ENST00000565684	UTP14A	Q9BVJ6	771 aa	Known RBP	29.4	■■■□□ 2.3
KIFC3-223	ENST00000565684	CCDC27	Q2M243	656 aa		29.39	■■■□□ 2.3
KIFC3-223	ENST00000565684	C8orf58	Q8NAV2	365 aa		29.39	■■■□□ 2.3
KIFC3-223	ENST00000565684	RNF123	Q5XPI4	1314 aa		29.39	■■■□□ 2.3
KIFC3-223	ENST00000565684	ELL2	O00472	640 aa	Predicted RBP	29.38	■■■□□ 2.29
KIFC3-223	ENST00000565684	HSPA6	P17066	643 aa		29.38	■■■□□ 2.29
KIFC3-223	ENST00000565684	SLC10A5	Q5PT55	438 aa		29.38	■■■□□ 2.29
KIFC3-223	ENST00000565684	PLBD2	Q8NHP8	589 aa		29.38	■■■□□ 2.29
KIFC3-223	ENST00000565684	HYPK	Q9NX55	129 aa		29.38	■■■□□ 2.29
KIFC3-223	ENST00000565684	FKBP4	Q02790	459 aa	Known RBP eCLIP	29.37	■■■□□ 2.29
KIFC3-223	ENST00000565684	SLC51A	Q86UW1	340 aa		29.37	■■■□□ 2.29
KIFC3-223	ENST00000565684	WWC1	Q8IX03	1113 aa		29.37	■■■□□ 2.29
KIFC3-223	ENST00000565684	RPGR	Q92834	1020 aa	Known RBP	29.37	■■■□□ 2.29
KIFC3-223	ENST00000565684	TAF1	P21675	1872 aa		29.36	■■■□□ 2.29
KIFC3-223	ENST00000565684	SYNE4	Q8N205	404 aa		29.36	■■■□□ 2.29
KIFC3-223	ENST00000565684	ANKRD13D	Q6ZTN6	518 aa		29.35	■■■□□ 2.29
KIFC3-223	ENST00000565684	TSR2	Q969E8	191 aa	Known RBP	29.35	■■■□□ 2.29
KIFC3-223	ENST00000565684	TSPYL6	Q8N831	410 aa		29.34	■■■□□ 2.29
KIFC3-223	ENST00000565684	RBM46	Q8TBY0	533 aa	Known RBP	29.34	■■■□□ 2.29
KIFC3-223	ENST00000565684	CRAMP1	Q96RY5	1269 aa		29.34	■■■□□ 2.29
KIFC3-223	ENST00000565684	ISCA1	Q9BUE6	129 aa		29.34	■■■□□ 2.29
KIFC3-223	ENST00000565684	POTEC	B2RU33	542 aa		29.33	■■■□□ 2.29
KIFC3-223	ENST00000565684	RTKN2	Q8IZC4	609 aa		29.33	■■■□□ 2.29
KIFC3-223	ENST00000565684	NLRP3	Q96P20	1036 aa		29.33	■■■□□ 2.29
KIFC3-223	ENST00000565684	PHAX	Q9H814	394 aa	Known RBP	29.33	■■■□□ 2.29
KIFC3-223	ENST00000565684	ZNF277	Q9NRM2	450 aa	Predicted RBP	29.33	■■■□□ 2.29
KIFC3-223	ENST00000565684	COL4A5	P29400	1685 aa		29.32	■■■□□ 2.28
KIFC3-223	ENST00000565684	NCBP3	Q53F19	620 aa	Known RBP	29.32	■■■□□ 2.28
KIFC3-223	ENST00000565684	C16orf71	Q8IYS4	520 aa	Predicted RBP	29.32	■■■□□ 2.28
KIFC3-223	ENST00000565684	ZNF428	Q96B54	188 aa		29.32	■■■□□ 2.28
KIFC3-223	ENST00000565684	RBM17	Q96I25	401 aa	Known RBP	29.32	■■■□□ 2.28
KIFC3-223	ENST00000565684	TRMT112	Q9UI30	125 aa	Known RBP	29.32	■■■□□ 2.28
KIFC3-223	ENST00000565684	HCLS1	P14317	486 aa	Predicted RBP	29.31	■■■□□ 2.28
KIFC3-223	ENST00000565684	SH3TC1	Q8TE82	1336 aa		29.3	■■■□□ 2.28
KIFC3-223	ENST00000565684	ABCC4	O15439	1325 aa		29.29	■■■□□ 2.28
KIFC3-223	ENST00000565684	ATP5J2-PTCD1	G3V325	749 aa		29.29	■■■□□ 2.28
KIFC3-223	ENST00000565684	PPEF1	O14829	653 aa	Predicted RBP	29.29	■■■□□ 2.28
KIFC3-223	ENST00000565684	VEGFA	P15692	232 aa	Predicted RBP	29.29	■■■□□ 2.28
KIFC3-223	ENST00000565684	PSMD1	Q99460	953 aa		29.29	■■■□□ 2.28
KIFC3-223	ENST00000565684	IL16	Q14005	1332 aa		29.28	■■■□□ 2.28
KIFC3-223	ENST00000565684	DPY19L2	Q6NUT2	758 aa		29.28	■■■□□ 2.28
KIFC3-223	ENST00000565684	LRRC37A	A6NMS7	1700 aa		29.28	■■■□□ 2.28
KIFC3-223	ENST00000565684	COL4A1	P02462	1669 aa		29.28	■■■□□ 2.28
KIFC3-223	ENST00000565684	IARS	P41252	1262 aa	Known RBP	29.27	■■■□□ 2.28
KIFC3-223	ENST00000565684	CC2D2B	Q6DHV5	1058 aa		29.27	■■■□□ 2.28
KIFC3-223	ENST00000565684	SCN4A	P35499	1836 aa		29.27	■■■□□ 2.28
KIFC3-223	ENST00000565684	DDN	O94850	711 aa	Predicted RBP	29.26	■■■□□ 2.27
KIFC3-223	ENST00000565684	TCERG1	O14776	1098 aa	Known RBP	29.25	■■■□□ 2.27
KIFC3-223	ENST00000565684	GOLGA2	Q08379	1002 aa		29.25	■■■□□ 2.27
KIFC3-223	ENST00000565684	FSTL1	Q12841	308 aa		29.25	■■■□□ 2.27
KIFC3-223	ENST00000565684	TRIM28	Q13263	835 aa	Known RBP	29.25	■■■□□ 2.27
KIFC3-223	ENST00000565684	CCDC30	Q5VVM6	783 aa		29.25	■■■□□ 2.27
KIFC3-223	ENST00000565684	ZNF541	Q9H0D2	1346 aa		29.24	■■■□□ 2.27
KIFC3-223	ENST00000565684	RIC3	Q7Z5B4	369 aa		29.24	■■■□□ 2.27
KIFC3-223	ENST00000565684	FAM89A	Q96GI7	184 aa		29.24	■■■□□ 2.27
KIFC3-223	ENST00000565684	SALL2	Q9Y467	1007 aa	Predicted RBP	29.22	■■■□□ 2.27
KIFC3-223	ENST00000565684	ATP6V0A2	Q9Y487	856 aa		29.22	■■■□□ 2.27
KIFC3-223	ENST00000565684	FANCI	Q9NVI1	1328 aa		29.21	■■■□□ 2.27
KIFC3-223	ENST00000565684	CACNA1F	O60840	1977 aa		29.21	■■■□□ 2.27
KIFC3-223	ENST00000565684	TWISTNB	Q3B726	338 aa	Predicted RBP	29.21	■■■□□ 2.27
KIFC3-223	ENST00000565684	FZD9	O00144	591 aa		29.2	■■■□□ 2.26
KIFC3-223	ENST00000565684	APLP1	P51693	650 aa		29.2	■■■□□ 2.26
KIFC3-223	ENST00000565684	GRIPAP1	Q4V328	841 aa		29.2	■■■□□ 2.26
KIFC3-223	ENST00000565684	SMC1B	Q8NDV3	1235 aa		29.2	■■■□□ 2.26
KIFC3-223	ENST00000565684	MYD88	Q99836	296 aa		29.2	■■■□□ 2.26
KIFC3-223	ENST00000565684	DUOX1	Q9NRD9	1551 aa		29.2	■■■□□ 2.26
KIFC3-223	ENST00000565684	RTL5	Q5HYW3	569 aa	Predicted RBP	29.19	■■■□□ 2.26
KIFC3-223	ENST00000565684	FAM9B	Q8IZU0	186 aa		29.19	■■■□□ 2.26
KIFC3-223	ENST00000565684	L3MBTL3	Q96JM7	780 aa	Predicted RBP	29.19	■■■□□ 2.26
KIFC3-223	ENST00000565684	CHMP4A	Q9BY43	222 aa		29.19	■■■□□ 2.26
KIFC3-223	ENST00000565684	GRAP	Q13588	217 aa		29.18	■■■□□ 2.26
KIFC3-223	ENST00000565684	DDX46	Q7L014	1031 aa	Known RBP	29.18	■■■□□ 2.26
KIFC3-223	ENST00000565684	WDR63	Q8IWG1	891 aa		29.18	■■■□□ 2.26
KIFC3-223	ENST00000565684	GRAPL	Q8TC17	118 aa	Predicted RBP	29.18	■■■□□ 2.26
KIFC3-223	ENST00000565684	LTBP1	Q14766	1721 aa		29.17	■■■□□ 2.26
KIFC3-223	ENST00000565684	BBOX1	O75936	387 aa		29.17	■■■□□ 2.26
KIFC3-223	ENST00000565684	ADAMTSL1	Q8N6G6	1762 aa		29.16	■■■□□ 2.26
KIFC3-223	ENST00000565684	SF3B3	Q15393	1217 aa	Known RBP	29.16	■■■□□ 2.26
KIFC3-223	ENST00000565684	METTL22	Q9BUU2	404 aa	Predicted RBP	29.16	■■■□□ 2.26
KIFC3-223	ENST00000565684	SPINK5	Q9NQ38	1064 aa	Predicted RBP	29.16	■■■□□ 2.26
KIFC3-223	ENST00000565684	IRS4	O14654	1257 aa	Predicted RBP	29.15	■■■□□ 2.26
KIFC3-223	ENST00000565684	G2E3	Q7L622	706 aa		29.15	■■■□□ 2.26
KIFC3-223	ENST00000565684	SP8	Q8IXZ3	490 aa		29.15	■■■□□ 2.26
KIFC3-223	ENST00000565684	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	29.15	■■■□□ 2.26
KIFC3-223	ENST00000565684	MYH3	P11055	1940 aa		29.14	■■■□□ 2.26

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms