RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 FAM187AA6NFU0 413 aa11.65□□□□□ -0.54
CDH13-207ENST00000565636 TNFRSF10AO00220 468 aa11.65□□□□□ -0.54
CDH13-207ENST00000565636 CDCA8Q53HL2 280 aa11.65□□□□□ -0.54
CDH13-207ENST00000565636 BRICD5Q6PL45 260 aa11.65□□□□□ -0.54
CDH13-207ENST00000565636 ZNF784Q8NCA9 323 aaPredicted RBP11.65□□□□□ -0.54
CDH13-207ENST00000565636 FLAD1Q8NFF5 587 aa11.65□□□□□ -0.54
CDH13-207ENST00000565636 ZCRB1Q8TBF4 217 aaKnown RBP11.65□□□□□ -0.54
CDH13-207ENST00000565636 GDF9O60383 454 aa11.64□□□□□ -0.55
CDH13-207ENST00000565636 CD46P15529 392 aa11.64□□□□□ -0.55
CDH13-207ENST00000565636 USP46P62068 366 aa11.64□□□□□ -0.55
CDH13-207ENST00000565636 MSS51Q4VC12 460 aa11.64□□□□□ -0.55
CDH13-207ENST00000565636 PLA2G2CQ5R387 149 aa11.64□□□□□ -0.55
CDH13-207ENST00000565636 KRI1Q8N9T8 703 aaKnown RBP11.64□□□□□ -0.55
CDH13-207ENST00000565636 TESK2Q96S53 571 aa11.64□□□□□ -0.55
CDH13-207ENST00000565636 LRRC4BQ9NT99 713 aa11.64□□□□□ -0.55
CDH13-207ENST00000565636 TONSLQ96HA7 1378 aa11.64□□□□□ -0.55
CDH13-207ENST00000565636 KDM4AO75164 1064 aa11.63□□□□□ -0.55
CDH13-207ENST00000565636 HOXC9P31274 260 aa11.63□□□□□ -0.55
CDH13-207ENST00000565636 ACSBG1Q96GR2 724 aa11.63□□□□□ -0.55
CDH13-207ENST00000565636 NSD2O96028 1365 aa11.63□□□□□ -0.55
CDH13-207ENST00000565636 RGPD2P0DJD1 1756 aa11.62□□□□□ -0.55
CDH13-207ENST00000565636 GRIN3BO60391 1043 aa11.62□□□□□ -0.55
CDH13-207ENST00000565636 AMPHP49418 695 aa11.62□□□□□ -0.55
CDH13-207ENST00000565636 MDM2Q00987 491 aaPredicted RBP11.62□□□□□ -0.55
CDH13-207ENST00000565636 FOXC1Q12948 553 aa11.62□□□□□ -0.55
CDH13-207ENST00000565636 FAM160A2Q8N612 972 aaPredicted RBP11.62□□□□□ -0.55
CDH13-207ENST00000565636 TIMELESSQ9UNS1 1208 aa11.62□□□□□ -0.55
CDH13-207ENST00000565636 SHANK3Q9BYB0 1731 aa11.61□□□□□ -0.55
CDH13-207ENST00000565636 TAF1LQ8IZX4 1826 aa11.61□□□□□ -0.55
CDH13-207ENST00000565636 CLCN1P35523 988 aa11.61□□□□□ -0.55
CDH13-207ENST00000565636 DDX54Q8TDD1 881 aaKnown RBP11.61□□□□□ -0.55
CDH13-207ENST00000565636 TFCP2L1Q9NZI6 479 aa11.61□□□□□ -0.55
CDH13-207ENST00000565636 PLEKHG2Q9H7P9 1386 aa11.61□□□□□ -0.55
CDH13-207ENST00000565636 MAP3K19Q56UN5 1328 aa11.6□□□□□ -0.55
CDH13-207ENST00000565636 TUBGCP6Q96RT7 1819 aa11.6□□□□□ -0.55
CDH13-207ENST00000565636 ST20-MTHFSA0A0A6YYL1 179 aa11.6□□□□□ -0.55
CDH13-207ENST00000565636 TMF1P82094 1093 aa11.6□□□□□ -0.55
CDH13-207ENST00000565636 ZNF827Q17R98 1081 aa11.6□□□□□ -0.55
CDH13-207ENST00000565636 DOT1LQ8TEK3 1739 aa11.6□□□□□ -0.55
CDH13-207ENST00000565636 SMG6Q86US8 1419 aaKnown RBP11.6□□□□□ -0.55
CDH13-207ENST00000565636 PNPLA7Q6ZV29 1317 aa11.6□□□□□ -0.55
CDH13-207ENST00000565636 UTRNP46939 3433 aa11.59□□□□□ -0.55
CDH13-207ENST00000565636 INSRP06213 1382 aa11.59□□□□□ -0.55
CDH13-207ENST00000565636 FYB1O15117 783 aa11.59□□□□□ -0.55
CDH13-207ENST00000565636 GPR162Q16538 588 aa11.59□□□□□ -0.55
CDH13-207ENST00000565636 RAPGEF4Q8WZA2 1011 aa11.59□□□□□ -0.55
CDH13-207ENST00000565636 ITGB4P16144 1822 aa11.58□□□□□ -0.56
CDH13-207ENST00000565636 USP47Q96K76 1375 aa11.58□□□□□ -0.56
CDH13-207ENST00000565636 C1QTNF8P60827 252 aa11.58□□□□□ -0.56
CDH13-207ENST00000565636 RNF19BQ6ZMZ0 732 aa11.58□□□□□ -0.56
CDH13-207ENST00000565636 SMARCC1Q92922 1105 aaPredicted RBP11.58□□□□□ -0.56
CDH13-207ENST00000565636 CCDC102AQ96A19 550 aa11.58□□□□□ -0.56
CDH13-207ENST00000565636 GPCPD1Q9NPB8 672 aa11.58□□□□□ -0.56
CDH13-207ENST00000565636 CD2APQ9Y5K6 639 aa11.58□□□□□ -0.56
CDH13-207ENST00000565636 MAP2P11137 1827 aaKnown RBP11.58□□□□□ -0.56
CDH13-207ENST00000565636 TATP17735 454 aaPredicted RBP11.57□□□□□ -0.56
CDH13-207ENST00000565636 NBPF6Q5VWK0 638 aa11.57□□□□□ -0.56
CDH13-207ENST00000565636 CYP4X1Q8N118 509 aa11.57□□□□□ -0.56
CDH13-207ENST00000565636 NBPF4Q96M43 638 aa11.57□□□□□ -0.56
CDH13-207ENST00000565636 USB1Q9BQ65 265 aaKnown RBP11.57□□□□□ -0.56
CDH13-207ENST00000565636 CCNL1Q9UK58 526 aaPredicted RBP11.57□□□□□ -0.56
CDH13-207ENST00000565636 NSD3Q9BZ95 1437 aa11.57□□□□□ -0.56
CDH13-207ENST00000565636 PCDH11XQ9BZA7 1347 aa11.57□□□□□ -0.56
CDH13-207ENST00000565636 PCDH11YQ9BZA8 1340 aa11.57□□□□□ -0.56
CDH13-207ENST00000565636 C5P01031 1676 aa11.56□□□□□ -0.56
CDH13-207ENST00000565636 KIF20BQ96Q89 1820 aa11.56□□□□□ -0.56
CDH13-207ENST00000565636 PRDM9Q9NQV7 894 aa11.56□□□□□ -0.56
CDH13-207ENST00000565636 PKD2L1Q9P0L9 805 aa11.56□□□□□ -0.56
CDH13-207ENST00000565636 FLT4P35916 1363 aa11.55□□□□□ -0.56
CDH13-207ENST00000565636 SYTL4Q96C24 671 aaPredicted RBP11.55□□□□□ -0.56
CDH13-207ENST00000565636 LTV1Q96GA3 475 aaPredicted RBP11.55□□□□□ -0.56
CDH13-207ENST00000565636 NUTM1Q86Y26 1132 aa11.54□□□□□ -0.56
CDH13-207ENST00000565636 PKD1L3Q7Z443 1732 aa11.54□□□□□ -0.56
CDH13-207ENST00000565636 NCAPD2Q15021 1401 aa11.53□□□□□ -0.56
CDH13-207ENST00000565636 MMP16P51512 607 aa11.53□□□□□ -0.56
CDH13-207ENST00000565636 COL23A1Q86Y22 540 aaPredicted RBP11.53□□□□□ -0.56
CDH13-207ENST00000565636 MEGF6O75095 1541 aa11.53□□□□□ -0.56
CDH13-207ENST00000565636 UBR3Q6ZT12 1888 aa11.53□□□□□ -0.56
CDH13-207ENST00000565636 ZNF831Q5JPB2 1677 aa11.52□□□□□ -0.56
CDH13-207ENST00000565636 ANKRD26Q9UPS8 1709 aa11.52□□□□□ -0.56
CDH13-207ENST00000565636 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.52□□□□□ -0.57
CDH13-207ENST00000565636 SPG7Q9UQ90 795 aa11.52□□□□□ -0.57
CDH13-207ENST00000565636 WASHC2AQ641Q2 1341 aa11.52□□□□□ -0.57
CDH13-207ENST00000565636 TTC24A2A3L6 582 aaPredicted RBP11.51□□□□□ -0.57
CDH13-207ENST00000565636 HOXA2O43364 376 aa11.51□□□□□ -0.57
CDH13-207ENST00000565636 GIGYF1O75420 1035 aaPredicted RBP11.51□□□□□ -0.57
CDH13-207ENST00000565636 CLSPNQ9HAW4 1339 aa11.51□□□□□ -0.57
CDH13-207ENST00000565636 C4BP0C0L5 1744 aa11.5□□□□□ -0.57
CDH13-207ENST00000565636 SSFA2P28290 1259 aa11.5□□□□□ -0.57
CDH13-207ENST00000565636 RRS1Q15050 365 aaKnown RBP11.5□□□□□ -0.57
CDH13-207ENST00000565636 HSP90AB2PQ58FF8 381 aa11.5□□□□□ -0.57
CDH13-207ENST00000565636 GGNBP2Q9H3C7 697 aa11.5□□□□□ -0.57
CDH13-207ENST00000565636 FAM217BQ9NTX9 383 aaPredicted RBP11.5□□□□□ -0.57
CDH13-207ENST00000565636 GOLGB1Q14789 3259 aaKnown RBP11.5□□□□□ -0.57
CDH13-207ENST00000565636 CYP27B1O15528 508 aa11.49□□□□□ -0.57
CDH13-207ENST00000565636 DXOO77932 396 aaKnown RBP11.49□□□□□ -0.57
CDH13-207ENST00000565636 TRIM32Q13049 653 aa11.49□□□□□ -0.57
CDH13-207ENST00000565636 TOR4AQ9NXH8 423 aa11.49□□□□□ -0.57
CDH13-207ENST00000565636 PALLDQ8WX93 1383 aa11.49□□□□□ -0.57
CDH13-207ENST00000565636 CTC1Q2NKJ3 1217 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms