RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 KIF6Q6ZMV9 814 aa23.91■■□□□ 1.42
CSPG4P13-201ENST00000565545 ARHGEF1Q92888 912 aaKnown RBP23.91■■□□□ 1.42
CSPG4P13-201ENST00000565545 USP44Q9H0E7 712 aa23.91■■□□□ 1.42
CSPG4P13-201ENST00000565545 ZBTB1Q9Y2K1 713 aa23.91■■□□□ 1.42
CSPG4P13-201ENST00000565545 IGHDP01880 384 aa23.9■■□□□ 1.42
CSPG4P13-201ENST00000565545 ADRA2BP18089 450 aa23.9■■□□□ 1.42
CSPG4P13-201ENST00000565545 CRKLP46109 303 aaKnown RBP23.9■■□□□ 1.42
CSPG4P13-201ENST00000565545 RC3H1Q5TC82 1133 aaKnown RBP23.9■■□□□ 1.42
CSPG4P13-201ENST00000565545 INTS5Q6P9B9 1019 aaKnown RBP23.9■■□□□ 1.42
CSPG4P13-201ENST00000565545 TTLL7Q6ZT98 887 aa23.9■■□□□ 1.42
CSPG4P13-201ENST00000565545 ARHGAP27Q6ZUM4 889 aa23.9■■□□□ 1.42
CSPG4P13-201ENST00000565545 CNTNAP4Q9C0A0 1308 aa23.88■■□□□ 1.41
CSPG4P13-201ENST00000565545 KIF3CO14782 793 aa23.88■■□□□ 1.41
CSPG4P13-201ENST00000565545 RPS6KA4O75676 772 aa23.88■■□□□ 1.41
CSPG4P13-201ENST00000565545 UBTFL1P0CB47 393 aaPredicted RBP23.88■■□□□ 1.41
CSPG4P13-201ENST00000565545 MYD88Q99836 296 aa23.88■■□□□ 1.41
CSPG4P13-201ENST00000565545 PARP3Q9Y6F1 533 aa23.88■■□□□ 1.41
CSPG4P13-201ENST00000565545 MYH14Q7Z406 1995 aaKnown RBP23.88■■□□□ 1.41
CSPG4P13-201ENST00000565545 AFDNP55196 1824 aaKnown RBP23.87■■□□□ 1.41
CSPG4P13-201ENST00000565545 NEURL1BA8MQ27 555 aa23.87■■□□□ 1.41
CSPG4P13-201ENST00000565545 EIF5P55010 431 aaKnown RBP23.87■■□□□ 1.41
CSPG4P13-201ENST00000565545 ANKRD44Q8N8A2 993 aa23.87■■□□□ 1.41
CSPG4P13-201ENST00000565545 C1orf115Q9H7X2 142 aa23.87■■□□□ 1.41
CSPG4P13-201ENST00000565545 C9orf78Q9NZ63 289 aaPredicted RBP23.87■■□□□ 1.41
CSPG4P13-201ENST00000565545 UTYO14607 1347 aa23.86■■□□□ 1.41
CSPG4P13-201ENST00000565545 MAP3K15Q6ZN16 1313 aa23.86■■□□□ 1.41
CSPG4P13-201ENST00000565545 CEP350Q5VT06 3117 aa23.86■■□□□ 1.41
CSPG4P13-201ENST00000565545 ERVV-1B6SEH8 477 aa23.86■■□□□ 1.41
CSPG4P13-201ENST00000565545 IGKV5-2P06315 115 aa23.86■■□□□ 1.41
CSPG4P13-201ENST00000565545 GYS1P13807 737 aa23.86■■□□□ 1.41
CSPG4P13-201ENST00000565545 DPEP1P16444 411 aa23.86■■□□□ 1.41
CSPG4P13-201ENST00000565545 A0A087WZG4 1122 aa23.85■■□□□ 1.41
CSPG4P13-201ENST00000565545 CWF19L2Q2TBE0 894 aaKnown RBP23.85■■□□□ 1.41
CSPG4P13-201ENST00000565545 HSP90AB3PQ58FF7 597 aa23.85■■□□□ 1.41
CSPG4P13-201ENST00000565545 CEP85Q6P2H3 762 aa23.85■■□□□ 1.41
CSPG4P13-201ENST00000565545 ZNF330Q9Y3S2 320 aaPredicted RBP23.85■■□□□ 1.41
CSPG4P13-201ENST00000565545 GRM8O00222 908 aa23.84■■□□□ 1.41
CSPG4P13-201ENST00000565545 HMMRO75330 724 aa23.84■■□□□ 1.41
CSPG4P13-201ENST00000565545 GCKRQ14397 625 aa23.84■■□□□ 1.41
CSPG4P13-201ENST00000565545 TRIM28Q13263 835 aaKnown RBP23.83■■□□□ 1.41
CSPG4P13-201ENST00000565545 TCIRG1Q13488 830 aa23.83■■□□□ 1.41
CSPG4P13-201ENST00000565545 ZBTB3Q9H5J0 574 aa23.83■■□□□ 1.41
CSPG4P13-201ENST00000565545 GIGYF2Q6Y7W6 1299 aaKnown RBP23.82■■□□□ 1.4
CSPG4P13-201ENST00000565545 DZIP3Q86Y13 1208 aaKnown RBP23.82■■□□□ 1.4
CSPG4P13-201ENST00000565545 SIRT2Q8IXJ6 389 aa23.82■■□□□ 1.4
CSPG4P13-201ENST00000565545 SMC5Q8IY18 1101 aa23.82■■□□□ 1.4
CSPG4P13-201ENST00000565545 CCDC191Q8NCU4 936 aa23.82■■□□□ 1.4
CSPG4P13-201ENST00000565545 GCC1Q96CN9 775 aa23.82■■□□□ 1.4
CSPG4P13-201ENST00000565545 LRRFIP2Q9Y608 721 aaKnown RBP23.82■■□□□ 1.4
CSPG4P13-201ENST00000565545 ANKRD36CQ5JPF3 1778 aa23.81■■□□□ 1.4
CSPG4P13-201ENST00000565545 RGL2O15211 777 aa23.81■■□□□ 1.4
CSPG4P13-201ENST00000565545 NBPF7P0C2Y1 421 aaPredicted RBP23.81■■□□□ 1.4
CSPG4P13-201ENST00000565545 ISCA1Q9BUE6 129 aa23.81■■□□□ 1.4
CSPG4P13-201ENST00000565545 NUP98P52948 1817 aa23.81■■□□□ 1.4
CSPG4P13-201ENST00000565545 C10orf71Q711Q0 1435 aa23.81■■□□□ 1.4
CSPG4P13-201ENST00000565545 TOMM70O94826 608 aa23.8■■□□□ 1.4
CSPG4P13-201ENST00000565545 ATP8B2P98198 1209 aa23.8■■□□□ 1.4
CSPG4P13-201ENST00000565545 CWC25Q9NXE8 425 aaPredicted RBP23.8■■□□□ 1.4
CSPG4P13-201ENST00000565545 COL15A1P39059 1388 aa23.79■■□□□ 1.4
CSPG4P13-201ENST00000565545 APLP1P51693 650 aa23.79■■□□□ 1.4
CSPG4P13-201ENST00000565545 PIM2Q9P1W9 311 aa23.79■■□□□ 1.4
CSPG4P13-201ENST00000565545 ATP5J2-PTCD1G3V325 749 aa23.78■■□□□ 1.4
CSPG4P13-201ENST00000565545 DCTPP1Q9H773 170 aa23.77■■□□□ 1.4
CSPG4P13-201ENST00000565545 SRP68Q9UHB9 627 aaKnown RBP23.77■■□□□ 1.4
CSPG4P13-201ENST00000565545 H7C1W4 665 aa23.76■■□□□ 1.39
CSPG4P13-201ENST00000565545 MTX1Q13505 466 aa23.76■■□□□ 1.39
CSPG4P13-201ENST00000565545 DALRD3Q5D0E6 543 aaKnown RBP23.76■■□□□ 1.39
CSPG4P13-201ENST00000565545 C9orf131Q5VYM1 1079 aa23.76■■□□□ 1.39
CSPG4P13-201ENST00000565545 NMRK2Q9NPI5 230 aa23.76■■□□□ 1.39
CSPG4P13-201ENST00000565545 TBC1D2BQ9UPU7 963 aa23.76■■□□□ 1.39
CSPG4P13-201ENST00000565545 BCORQ6W2J9 1755 aa23.75■■□□□ 1.39
CSPG4P13-201ENST00000565545 KCNA3P22001 575 aa23.75■■□□□ 1.39
CSPG4P13-201ENST00000565545 CAMTA2O94983 1202 aa23.74■■□□□ 1.39
CSPG4P13-201ENST00000565545 HLFQ16534 295 aa23.74■■□□□ 1.39
CSPG4P13-201ENST00000565545 CLEC4GQ6UXB4 293 aa23.74■■□□□ 1.39
CSPG4P13-201ENST00000565545 C16orf71Q8IYS4 520 aaPredicted RBP23.74■■□□□ 1.39
CSPG4P13-201ENST00000565545 SSH3Q8TE77 659 aa23.74■■□□□ 1.39
CSPG4P13-201ENST00000565545 ZNF652Q9Y2D9 606 aa23.74■■□□□ 1.39
CSPG4P13-201ENST00000565545 PDZRN3Q9UPQ7 1066 aa23.73■■□□□ 1.39
CSPG4P13-201ENST00000565545 USP42Q9H9J4 1324 aaKnown RBP23.73■■□□□ 1.39
CSPG4P13-201ENST00000565545 C4AP0C0L4 1744 aa23.73■■□□□ 1.39
CSPG4P13-201ENST00000565545 ZPR1O75312 459 aa23.72■■□□□ 1.39
CSPG4P13-201ENST00000565545 CASP7P55210 303 aa23.72■■□□□ 1.39
CSPG4P13-201ENST00000565545 DDR1Q08345 913 aa23.72■■□□□ 1.39
CSPG4P13-201ENST00000565545 POLA2Q14181 598 aa23.72■■□□□ 1.39
CSPG4P13-201ENST00000565545 ZNF34Q8IZ26 560 aa23.72■■□□□ 1.39
CSPG4P13-201ENST00000565545 SUCLG2Q96I99 432 aa23.72■■□□□ 1.39
CSPG4P13-201ENST00000565545 KIF13BQ9NQT8 1826 aa23.71■■□□□ 1.39
CSPG4P13-201ENST00000565545 UBE3BQ7Z3V4 1068 aa23.71■■□□□ 1.39
CSPG4P13-201ENST00000565545 PPP1R42Q7Z4L9 355 aa23.71■■□□□ 1.39
CSPG4P13-201ENST00000565545 PCCAP05165 728 aaPredicted RBP23.7■■□□□ 1.38
CSPG4P13-201ENST00000565545 CHRNA5P30532 468 aa23.7■■□□□ 1.38
CSPG4P13-201ENST00000565545 NUCB1Q02818 461 aa23.7■■□□□ 1.38
CSPG4P13-201ENST00000565545 NLRP10Q86W26 655 aa23.7■■□□□ 1.38
CSPG4P13-201ENST00000565545 NARFQ9UHQ1 456 aa23.7■■□□□ 1.38
CSPG4P13-201ENST00000565545 SCN7AQ01118 1682 aa23.7■■□□□ 1.38
CSPG4P13-201ENST00000565545 PNMA6EA0A0J9YXQ4 647 aa23.69■■□□□ 1.38
CSPG4P13-201ENST00000565545 SRGAP3O43295 1099 aa23.69■■□□□ 1.38
CSPG4P13-201ENST00000565545 PARP10Q53GL7 1025 aa23.69■■□□□ 1.38
CSPG4P13-201ENST00000565545 ZBTB38Q8NAP3 1195 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms