RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 SLC52A1Q9NWF4 448 aa6.59□□□□□ -1.35
CAPN3-214ENST00000565274 NUDCQ9Y266 331 aa6.59□□□□□ -1.35
CAPN3-214ENST00000565274 SUGT1Q9Y2Z0 365 aa6.59□□□□□ -1.35
CAPN3-214ENST00000565274 PLA2R1Q13018 1463 aa6.59□□□□□ -1.36
CAPN3-214ENST00000565274 PRAG1Q86YV5 1406 aa6.59□□□□□ -1.36
CAPN3-214ENST00000565274 PREX2Q70Z35 1606 aa6.58□□□□□ -1.36
CAPN3-214ENST00000565274 UNC13BO14795 1591 aa6.58□□□□□ -1.36
CAPN3-214ENST00000565274 PLXNC1O60486 1568 aa6.58□□□□□ -1.36
CAPN3-214ENST00000565274 GPR25O00155 361 aa6.58□□□□□ -1.36
CAPN3-214ENST00000565274 MEN1O00255 615 aa6.58□□□□□ -1.36
CAPN3-214ENST00000565274 TPD52L2O43399 206 aaKnown RBP6.58□□□□□ -1.36
CAPN3-214ENST00000565274 MARCH6O60337 910 aa6.58□□□□□ -1.36
CAPN3-214ENST00000565274 CALD1Q05682 793 aaKnown RBP6.58□□□□□ -1.36
CAPN3-214ENST00000565274 PDE3BQ13370 1112 aa6.58□□□□□ -1.36
CAPN3-214ENST00000565274 GAS6Q14393 721 aa6.58□□□□□ -1.36
CAPN3-214ENST00000565274 NBPF1Q3BBV0 1214 aa6.58□□□□□ -1.36
CAPN3-214ENST00000565274 B4GALNT3Q6L9W6 998 aa6.58□□□□□ -1.36
CAPN3-214ENST00000565274 RINLQ6ZS11 566 aa6.58□□□□□ -1.36
CAPN3-214ENST00000565274 RIPOR1Q6ZS17 1223 aa6.58□□□□□ -1.36
CAPN3-214ENST00000565274 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.58□□□□□ -1.36
CAPN3-214ENST00000565274 SCARF2Q96GP6 870 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-214ENST00000565274 ZNF830Q96NB3 372 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-214ENST00000565274 MYH16Q9H6N6 1097 aa6.58□□□□□ -1.36
CAPN3-214ENST00000565274 SH3BP1Q9Y3L3 701 aa6.58□□□□□ -1.36
CAPN3-214ENST00000565274 PPME1Q9Y570 386 aa6.58□□□□□ -1.36
CAPN3-214ENST00000565274 DNMT3AQ9Y6K1 912 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-214ENST00000565274 FAM135AQ9P2D6 1515 aa6.58□□□□□ -1.36
CAPN3-214ENST00000565274 UHRF1BP1LA0JNW5 1464 aa6.58□□□□□ -1.36
CAPN3-214ENST00000565274 MYBBP1AQ9BQG0 1328 aaKnown RBP6.57□□□□□ -1.36
CAPN3-214ENST00000565274 ARAP3Q8WWN8 1544 aa6.57□□□□□ -1.36
CAPN3-214ENST00000565274 RRP9O43818 475 aaKnown RBP6.57□□□□□ -1.36
CAPN3-214ENST00000565274 CELA2BP08218 269 aaPredicted RBP6.57□□□□□ -1.36
CAPN3-214ENST00000565274 SRSF11Q05519 484 aaKnown RBP6.57□□□□□ -1.36
CAPN3-214ENST00000565274 IRF5Q13568 498 aa6.57□□□□□ -1.36
CAPN3-214ENST00000565274 CARD11Q9BXL7 1154 aa6.57□□□□□ -1.36
CAPN3-214ENST00000565274 HDAC5Q9UQL6 1122 aa6.57□□□□□ -1.36
CAPN3-214ENST00000565274 E9PCH4 1651 aa6.57□□□□□ -1.36
CAPN3-214ENST00000565274 ERBINQ96RT1 1412 aa6.57□□□□□ -1.36
CAPN3-214ENST00000565274 SAMD9LQ8IVG5 1584 aa6.57□□□□□ -1.36
CAPN3-214ENST00000565274 PARD3Q8TEW0 1356 aa6.57□□□□□ -1.36
CAPN3-214ENST00000565274 ANP32AP39687 249 aaKnown RBP6.56□□□□□ -1.36
CAPN3-214ENST00000565274 MYBPC2Q14324 1141 aa6.56□□□□□ -1.36
CAPN3-214ENST00000565274 CCDC96Q2M329 555 aa6.56□□□□□ -1.36
CAPN3-214ENST00000565274 KANK3Q6NY19 840 aa6.56□□□□□ -1.36
CAPN3-214ENST00000565274 CEP120Q8N960 986 aa6.56□□□□□ -1.36
CAPN3-214ENST00000565274 DDRGK1Q96HY6 314 aa6.56□□□□□ -1.36
CAPN3-214ENST00000565274 ZNF777Q9ULD5 760 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-214ENST00000565274 PCDHB9Q9Y5E1 797 aa6.56□□□□□ -1.36
CAPN3-214ENST00000565274 RPS6KL1Q9Y6S9 549 aa6.56□□□□□ -1.36
CAPN3-214ENST00000565274 RTEL1-TNFRSF6BF6WH68 1400 aa6.56□□□□□ -1.36
CAPN3-214ENST00000565274 NEURL4Q96JN8 1562 aa6.56□□□□□ -1.36
CAPN3-214ENST00000565274 DUOX2Q9NRD8 1548 aa6.55□□□□□ -1.36
CAPN3-214ENST00000565274 IQGAP3Q86VI3 1631 aa6.55□□□□□ -1.36
CAPN3-214ENST00000565274 ST20-MTHFSA0A0A6YYL1 179 aa6.55□□□□□ -1.36
CAPN3-214ENST00000565274 UNCXA6NJT0 531 aa6.55□□□□□ -1.36
CAPN3-214ENST00000565274 ESPNB1AK53 854 aa6.55□□□□□ -1.36
CAPN3-214ENST00000565274 GIGYF1O75420 1035 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-214ENST00000565274 HNRNPMP52272 730 aaKnown RBP eCLIP6.55□□□□□ -1.36
CAPN3-214ENST00000565274 APBB1IPQ7Z5R6 666 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-214ENST00000565274 NLRP13Q86W25 1043 aa6.55□□□□□ -1.36
CAPN3-214ENST00000565274 IL27Q8NEV9 243 aa6.55□□□□□ -1.36
CAPN3-214ENST00000565274 ZNF837Q96EG3 531 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-214ENST00000565274 IPO9Q96P70 1041 aaKnown RBP6.55□□□□□ -1.36
CAPN3-214ENST00000565274 GAS2L1Q99501 681 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-214ENST00000565274 CCDC144AA2RUR9 1427 aa6.55□□□□□ -1.36
CAPN3-214ENST00000565274 PLCH2O75038 1416 aa6.55□□□□□ -1.36
CAPN3-214ENST00000565274 ABCC2Q92887 1545 aa6.55□□□□□ -1.36
CAPN3-214ENST00000565274 CDC42BPBQ9Y5S2 1711 aa6.54□□□□□ -1.36
CAPN3-214ENST00000565274 ATP5J2-PTCD1G3V325 749 aa6.54□□□□□ -1.36
CAPN3-214ENST00000565274 RFC5P40937 340 aa6.54□□□□□ -1.36
CAPN3-214ENST00000565274 RNF144AP50876 292 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-214ENST00000565274 FOXR1Q6PIV2 292 aa6.54□□□□□ -1.36
CAPN3-214ENST00000565274 SDR16C5Q8N3Y7 309 aa6.54□□□□□ -1.36
CAPN3-214ENST00000565274 NEDD1Q8NHV4 660 aa6.54□□□□□ -1.36
CAPN3-214ENST00000565274 TMC1Q8TDI8 760 aa6.54□□□□□ -1.36
CAPN3-214ENST00000565274 EVI5LQ96CN4 794 aa6.54□□□□□ -1.36
CAPN3-214ENST00000565274 TESK2Q96S53 571 aa6.54□□□□□ -1.36
CAPN3-214ENST00000565274 ENAMQ9NRM1 1142 aa6.54□□□□□ -1.36
CAPN3-214ENST00000565274 AMOTL2Q9Y2J4 779 aa6.54□□□□□ -1.36
CAPN3-214ENST00000565274 PRDM15P57071 1507 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-214ENST00000565274 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.54□□□□□ -1.36
CAPN3-214ENST00000565274 TRPM1Q7Z4N2 1603 aa6.54□□□□□ -1.36
CAPN3-214ENST00000565274 EIF2AK4Q9P2K8 1649 aaKnown RBP6.54□□□□□ -1.36
CAPN3-214ENST00000565274 COL17A1Q9UMD9 1497 aaPredicted RBP6.53□□□□□ -1.36
CAPN3-214ENST00000565274 CNTNAP5Q8WYK1 1306 aa6.53□□□□□ -1.36
CAPN3-214ENST00000565274 PTPRTO14522 1441 aa6.53□□□□□ -1.36
CAPN3-214ENST00000565274 SCAPERQ9BY12 1400 aa6.53□□□□□ -1.36
CAPN3-214ENST00000565274 POU4F2Q12837 409 aa6.53□□□□□ -1.36
CAPN3-214ENST00000565274 DBN1Q16643 649 aa6.53□□□□□ -1.36
CAPN3-214ENST00000565274 SLC27A3Q5K4L6 730 aa6.53□□□□□ -1.36
CAPN3-214ENST00000565274 TRIM22Q8IYM9 498 aa6.53□□□□□ -1.36
CAPN3-214ENST00000565274 DCAF11Q8TEB1 546 aa6.53□□□□□ -1.36
CAPN3-214ENST00000565274 GTPBP3Q969Y2 492 aaKnown RBP6.53□□□□□ -1.36
CAPN3-214ENST00000565274 SIRT1Q96EB6 747 aa6.53□□□□□ -1.36
CAPN3-214ENST00000565274 MBIPQ9NS73 344 aa6.53□□□□□ -1.36
CAPN3-214ENST00000565274 NPC1L1Q9UHC9 1359 aa6.53□□□□□ -1.36
CAPN3-214ENST00000565274 A2MP01023 1474 aa6.53□□□□□ -1.36
CAPN3-214ENST00000565274 A0A1W2PRU2 124 aa6.52□□□□□ -1.37
CAPN3-214ENST00000565274 IGHA1P01876 353 aa6.52□□□□□ -1.37
CAPN3-214ENST00000565274 ERCC3P19447 782 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms