RNA–Protein interactions for RNA: ENST00000564403.6

TCF4-224, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-224ENST00000564403 NUTM1Q86Y26 1132 aa11.02□□□□□ -0.65
TCF4-224ENST00000564403 CEP83Q9Y592 693 aa11.02□□□□□ -0.65
TCF4-224ENST00000564403 MRVI1Q9Y6F6 885 aa11.02□□□□□ -0.65
TCF4-224ENST00000564403 KIF1AQ12756 1690 aa11.01□□□□□ -0.65
TCF4-224ENST00000564403 CDC45O75419 566 aa11.01□□□□□ -0.65
TCF4-224ENST00000564403 PDE1AP54750 535 aa11.01□□□□□ -0.65
TCF4-224ENST00000564403 IFNL2Q8IZJ0 200 aa11.01□□□□□ -0.65
TCF4-224ENST00000564403 CGNQ9P2M7 1197 aaKnown RBP11.01□□□□□ -0.65
TCF4-224ENST00000564403 SPG7Q9UQ90 795 aa11.01□□□□□ -0.65
TCF4-224ENST00000564403 DCCP43146 1447 aa11.01□□□□□ -0.65
TCF4-224ENST00000564403 SDR16C5Q8N3Y7 309 aa11.01□□□□□ -0.65
TCF4-224ENST00000564403 DDX54Q8TDD1 881 aaKnown RBP11.01□□□□□ -0.65
TCF4-224ENST00000564403 EVI5LQ96CN4 794 aa11.01□□□□□ -0.65
TCF4-224ENST00000564403 LRRCC1Q9C099 1032 aa11.01□□□□□ -0.65
TCF4-224ENST00000564403 FOXD4L1Q9NU39 408 aa11.01□□□□□ -0.65
TCF4-224ENST00000564403 RPS6KL1Q9Y6S9 549 aa11.01□□□□□ -0.65
TCF4-224ENST00000564403 HOXB7P09629 217 aa11□□□□□ -0.65
TCF4-224ENST00000564403 SSFA2P28290 1259 aa11□□□□□ -0.65
TCF4-224ENST00000564403 CT47A1Q5JQC4 288 aaPredicted RBP11□□□□□ -0.65
TCF4-224ENST00000564403 TMCO4Q5TGY1 634 aa11□□□□□ -0.65
TCF4-224ENST00000564403 ATL2Q8NHH9 583 aa11□□□□□ -0.65
TCF4-224ENST00000564403 ANTXR1Q9H6X2 564 aa11□□□□□ -0.65
TCF4-224ENST00000564403 SOS1Q07889 1333 aaPredicted RBP11□□□□□ -0.65
TCF4-224ENST00000564403 HEG1Q9ULI3 1381 aa11□□□□□ -0.65
TCF4-224ENST00000564403 MAP4K4O95819 1239 aaPredicted RBP11□□□□□ -0.65
TCF4-224ENST00000564403 LARP1Q6PKG0 1096 aaKnown RBP11□□□□□ -0.65
TCF4-224ENST00000564403 MTERF4Q7Z6M4 381 aaKnown RBP11□□□□□ -0.65
TCF4-224ENST00000564403 UNC5CLQ8IV45 518 aa11□□□□□ -0.65
TCF4-224ENST00000564403 XIRP1Q702N8 1843 aaKnown RBP11□□□□□ -0.65
TCF4-224ENST00000564403 STRCQ7RTU9 1775 aa10.99□□□□□ -0.65
TCF4-224ENST00000564403 LMO7Q8WWI1 1683 aa10.99□□□□□ -0.65
TCF4-224ENST00000564403 RBM26Q5T8P6 1007 aaKnown RBP10.99□□□□□ -0.65
TCF4-224ENST00000564403 DDX46Q7L014 1031 aaKnown RBP10.99□□□□□ -0.65
TCF4-224ENST00000564403 PA2G4Q9UQ80 394 aaKnown RBP10.99□□□□□ -0.65
TCF4-224ENST00000564403 KSR2Q6VAB6 950 aa10.99□□□□□ -0.65
TCF4-224ENST00000564403 COPS6Q7L5N1 327 aa10.99□□□□□ -0.65
TCF4-224ENST00000564403 C9orf78Q9NZ63 289 aaPredicted RBP10.99□□□□□ -0.65
TCF4-224ENST00000564403 KDM3BQ7LBC6 1761 aa10.98□□□□□ -0.65
TCF4-224ENST00000564403 CABP4P57796 275 aa10.98□□□□□ -0.65
TCF4-224ENST00000564403 SSH3Q8TE77 659 aa10.98□□□□□ -0.65
TCF4-224ENST00000564403 XAGE3Q8WTP9 111 aa10.98□□□□□ -0.65
TCF4-224ENST00000564403 PIK3R5Q8WYR1 880 aa10.98□□□□□ -0.65
TCF4-224ENST00000564403 RILPL2Q969X0 211 aa10.98□□□□□ -0.65
TCF4-224ENST00000564403 CALR3Q96L12 384 aaKnown RBP10.98□□□□□ -0.65
TCF4-224ENST00000564403 MTA3Q9BTC8 594 aa10.98□□□□□ -0.65
TCF4-224ENST00000564403 SOS2Q07890 1332 aaPredicted RBP10.98□□□□□ -0.65
TCF4-224ENST00000564403 IBTKQ9P2D0 1353 aaPredicted RBP10.98□□□□□ -0.65
TCF4-224ENST00000564403 NCOA3Q9Y6Q9 1424 aa10.98□□□□□ -0.65
TCF4-224ENST00000564403 DDX21Q9NR30 783 aaKnown RBP eCLIP10.98□□□□□ -0.65
TCF4-224ENST00000564403 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.98□□□□□ -0.65
TCF4-224ENST00000564403 COL18A1P39060 1754 aa10.98□□□□□ -0.65
TCF4-224ENST00000564403 CAMTA1Q9Y6Y1 1673 aa10.98□□□□□ -0.65
TCF4-224ENST00000564403 TRIM6-TRIM34B2RNG4 842 aa10.97□□□□□ -0.65
TCF4-224ENST00000564403 PTCD1O75127 700 aaKnown RBP10.97□□□□□ -0.65
TCF4-224ENST00000564403 MX1P20591 662 aa10.97□□□□□ -0.65
TCF4-224ENST00000564403 RIC3Q7Z5B4 369 aa10.97□□□□□ -0.65
TCF4-224ENST00000564403 KLHDC4Q8TBB5 520 aa10.97□□□□□ -0.65
TCF4-224ENST00000564403 DCAF5Q96JK2 942 aa10.97□□□□□ -0.65
TCF4-224ENST00000564403 TESPA1A2RU30 521 aaPredicted RBP10.97□□□□□ -0.65
TCF4-224ENST00000564403 IGKV5-2P06315 115 aa10.97□□□□□ -0.65
TCF4-224ENST00000564403 EVA1CP58658 441 aa10.97□□□□□ -0.65
TCF4-224ENST00000564403 SETDB1Q15047 1291 aa10.97□□□□□ -0.65
TCF4-224ENST00000564403 TTC5Q8N0Z6 440 aa10.97□□□□□ -0.65
TCF4-224ENST00000564403 KAZALD1Q96I82 304 aa10.97□□□□□ -0.65
TCF4-224ENST00000564403 SALL3Q9BXA9 1300 aa10.97□□□□□ -0.65
TCF4-224ENST00000564403 USP26Q9BXU7 913 aa10.96□□□□□ -0.65
TCF4-224ENST00000564403 HYPKQ9NX55 129 aa10.96□□□□□ -0.65
TCF4-224ENST00000564403 CACNA1FO60840 1977 aa10.96□□□□□ -0.65
TCF4-224ENST00000564403 ATP5J2-PTCD1G3V325 749 aa10.96□□□□□ -0.66
TCF4-224ENST00000564403 TPD52L2O43399 206 aaKnown RBP10.96□□□□□ -0.66
TCF4-224ENST00000564403 GET4Q7L5D6 327 aaPredicted RBP10.96□□□□□ -0.66
TCF4-224ENST00000564403 ZCRB1Q8TBF4 217 aaKnown RBP10.96□□□□□ -0.66
TCF4-224ENST00000564403 RHPN1Q8TCX5 695 aa10.96□□□□□ -0.66
TCF4-224ENST00000564403 IL25Q9H293 177 aa10.96□□□□□ -0.66
TCF4-224ENST00000564403 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.96□□□□□ -0.66
TCF4-224ENST00000564403 WDR17Q8IZU2 1322 aa10.96□□□□□ -0.66
TCF4-224ENST00000564403 POLA2Q14181 598 aa10.95□□□□□ -0.66
TCF4-224ENST00000564403 HSCBQ8IWL3 235 aa10.95□□□□□ -0.66
TCF4-224ENST00000564403 MSL3Q8N5Y2 521 aaKnown RBP10.95□□□□□ -0.66
TCF4-224ENST00000564403 SUCLG2Q96I99 432 aa10.95□□□□□ -0.66
TCF4-224ENST00000564403 MARCH6O60337 910 aa10.95□□□□□ -0.66
TCF4-224ENST00000564403 MYD88Q99836 296 aa10.95□□□□□ -0.66
TCF4-224ENST00000564403 OSBPL3Q9H4L5 887 aa10.95□□□□□ -0.66
TCF4-224ENST00000564403 RBM28Q9NW13 759 aaKnown RBP10.95□□□□□ -0.66
TCF4-224ENST00000564403 CPDO75976 1380 aa10.95□□□□□ -0.66
TCF4-224ENST00000564403 SNRPA1P09661 255 aaKnown RBP10.94□□□□□ -0.66
TCF4-224ENST00000564403 EPHA10Q5JZY3 1008 aa10.94□□□□□ -0.66
TCF4-224ENST00000564403 SIL1Q9H173 461 aa10.94□□□□□ -0.66
TCF4-224ENST00000564403 BICC1Q9H694 974 aaKnown RBP10.94□□□□□ -0.66
TCF4-224ENST00000564403 A1BGP04217 495 aa10.94□□□□□ -0.66
TCF4-224ENST00000564403 CCDC172P0C7W6 258 aa10.94□□□□□ -0.66
TCF4-224ENST00000564403 LRP10Q7Z4F1 713 aa10.94□□□□□ -0.66
TCF4-224ENST00000564403 KAT6BQ8WYB5 2073 aa10.94□□□□□ -0.66
TCF4-224ENST00000564403 CCDC97Q96F63 343 aaPredicted RBP10.94□□□□□ -0.66
TCF4-224ENST00000564403 CCDC94Q9BW85 323 aaPredicted RBP10.94□□□□□ -0.66
TCF4-224ENST00000564403 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.93□□□□□ -0.66
TCF4-224ENST00000564403 GRM8O00222 908 aa10.93□□□□□ -0.66
TCF4-224ENST00000564403 LINS1Q8NG48 757 aa10.93□□□□□ -0.66
TCF4-224ENST00000564403 ITFG2Q969R8 447 aa10.93□□□□□ -0.66
TCF4-224ENST00000564403 MYCBPQ99417 103 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms