RNA–Protein interactions for RNA: ENST00000564354.1

AP000842.3-201, humanhuman

TSL 3 BASIC

Gene AP000842.3, Length 808 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.3-201ENST00000564354 SYNJ2O15056 1496 aa10.78□□□□□ -0.68
AP000842.3-201ENST00000564354 GAPVD1Q14C86 1478 aa10.77□□□□□ -0.69
AP000842.3-201ENST00000564354 LRRC69Q6ZNQ3 347 aa10.77□□□□□ -0.69
AP000842.3-201ENST00000564354 L3MBTL2Q969R5 705 aa10.77□□□□□ -0.69
AP000842.3-201ENST00000564354 SLC30A3Q99726 388 aa10.77□□□□□ -0.69
AP000842.3-201ENST00000564354 KRTAP4-12Q9BQ66 201 aa10.77□□□□□ -0.69
AP000842.3-201ENST00000564354 NOD1Q9Y239 953 aa10.77□□□□□ -0.69
AP000842.3-201ENST00000564354 C8orf86Q6ZUL3 223 aa10.76□□□□□ -0.69
AP000842.3-201ENST00000564354 DEPDC4Q8N2C3 294 aa10.76□□□□□ -0.69
AP000842.3-201ENST00000564354 CUX1P39880 1505 aa10.75□□□□□ -0.69
AP000842.3-201ENST00000564354 NOS2P35228 1153 aa10.75□□□□□ -0.69
AP000842.3-201ENST00000564354 SFSWAPQ12872 951 aaKnown RBP10.75□□□□□ -0.69
AP000842.3-201ENST00000564354 PBRM1Q86U86 1689 aa10.74□□□□□ -0.69
AP000842.3-201ENST00000564354 POM121CA8CG34 1229 aa10.74□□□□□ -0.69
AP000842.3-201ENST00000564354 EPHA4P54764 986 aa10.74□□□□□ -0.69
AP000842.3-201ENST00000564354 NCOA4Q13772 614 aa10.74□□□□□ -0.69
AP000842.3-201ENST00000564354 GRIK4Q16099 956 aa10.74□□□□□ -0.69
AP000842.3-201ENST00000564354 C20orf204Q6ZNR8 217 aa10.74□□□□□ -0.69
AP000842.3-201ENST00000564354 ZNF358Q9NW07 568 aa10.74□□□□□ -0.69
AP000842.3-201ENST00000564354 H2AFB1P0C5Y9 115 aa10.73□□□□□ -0.69
AP000842.3-201ENST00000564354 H2AFB2P0C5Z0 115 aa10.73□□□□□ -0.69
AP000842.3-201ENST00000564354 ADH7P40394 386 aa10.73□□□□□ -0.69
AP000842.3-201ENST00000564354 GTF2IP78347 998 aa10.73□□□□□ -0.69
AP000842.3-201ENST00000564354 NFATC2IPQ8NCF5 419 aa10.73□□□□□ -0.69
AP000842.3-201ENST00000564354 LZTS3O60299 673 aaPredicted RBP10.72□□□□□ -0.69
AP000842.3-201ENST00000564354 SPEM2Q0P670 501 aa10.72□□□□□ -0.69
AP000842.3-201ENST00000564354 LCE3BQ5TA77 95 aa10.72□□□□□ -0.69
AP000842.3-201ENST00000564354 HDGFL1Q5TGJ6 251 aa10.72□□□□□ -0.69
AP000842.3-201ENST00000564354 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.72□□□□□ -0.69
AP000842.3-201ENST00000564354 USP17L5A8MUK1 530 aa10.71□□□□□ -0.69
AP000842.3-201ENST00000564354 C9orf172C9J069 976 aa10.71□□□□□ -0.69
AP000842.3-201ENST00000564354 ADGRE1Q14246 886 aa10.71□□□□□ -0.69
AP000842.3-201ENST00000564354 NEUROD4Q9HD90 331 aa10.71□□□□□ -0.69
AP000842.3-201ENST00000564354 NEUROD1Q13562 356 aa10.7□□□□□ -0.7
AP000842.3-201ENST00000564354 SLC9A9Q8IVB4 645 aa10.7□□□□□ -0.7
AP000842.3-201ENST00000564354 MBTPS1Q14703 1052 aa10.69□□□□□ -0.7
AP000842.3-201ENST00000564354 NBPF11Q86T75 865 aa10.69□□□□□ -0.7
AP000842.3-201ENST00000564354 SELPP16109 830 aa10.68□□□□□ -0.7
AP000842.3-201ENST00000564354 KCNQ4P56696 695 aa10.68□□□□□ -0.7
AP000842.3-201ENST00000564354 LRP8Q14114 963 aa10.68□□□□□ -0.7
AP000842.3-201ENST00000564354 ADAMTS19Q8TE59 1207 aa10.68□□□□□ -0.7
AP000842.3-201ENST00000564354 ZNF232Q9UNY5 417 aa10.68□□□□□ -0.7
AP000842.3-201ENST00000564354 SERTM1A2A2V5 107 aa10.67□□□□□ -0.7
AP000842.3-201ENST00000564354 TMEM132AQ24JP5 1023 aa10.67□□□□□ -0.7
AP000842.3-201ENST00000564354 TRAPPC3LQ5T215 181 aa10.67□□□□□ -0.7
AP000842.3-201ENST00000564354 SH3PXD2AQ5TCZ1 1133 aa10.67□□□□□ -0.7
AP000842.3-201ENST00000564354 RAB44Q7Z6P3 723 aaPredicted RBP10.67□□□□□ -0.7
AP000842.3-201ENST00000564354 TRIM50Q86XT4 487 aa10.67□□□□□ -0.7
AP000842.3-201ENST00000564354 RHPN1Q8TCX5 695 aa10.67□□□□□ -0.7
AP000842.3-201ENST00000564354 ERCC6L2Q5T890 1561 aa10.66□□□□□ -0.7
AP000842.3-201ENST00000564354 ELNP15502 786 aa10.66□□□□□ -0.7
AP000842.3-201ENST00000564354 TBCELQ5QJ74 424 aa10.66□□□□□ -0.7
AP000842.3-201ENST00000564354 TXNRD3Q86VQ6 643 aa10.66□□□□□ -0.7
AP000842.3-201ENST00000564354 BRD7Q9NPI1 651 aa10.66□□□□□ -0.7
AP000842.3-201ENST00000564354 ABCA10Q8WWZ4 1543 aa10.65□□□□□ -0.7
AP000842.3-201ENST00000564354 A0A0A0MRY4 1105 aa10.65□□□□□ -0.7
AP000842.3-201ENST00000564354 LILRB5O75023 590 aa10.65□□□□□ -0.7
AP000842.3-201ENST00000564354 C1orf53Q5VUE5 145 aa10.65□□□□□ -0.7
AP000842.3-201ENST00000564354 TNS4Q8IZW8 715 aa10.65□□□□□ -0.7
AP000842.3-201ENST00000564354 CLUAP1Q96AJ1 413 aa10.65□□□□□ -0.7
AP000842.3-201ENST00000564354 LENG1Q96BZ8 264 aaPredicted RBP10.65□□□□□ -0.7
AP000842.3-201ENST00000564354 GRIN2AQ12879 1464 aa10.65□□□□□ -0.7
AP000842.3-201ENST00000564354 ABCA5Q8WWZ7 1642 aa10.65□□□□□ -0.7
AP000842.3-201ENST00000564354 USP17L3A6NCW0 530 aa10.64□□□□□ -0.71
AP000842.3-201ENST00000564354 USP17L4A6NCW7 530 aa10.64□□□□□ -0.71
AP000842.3-201ENST00000564354 USP17L2Q6R6M4 530 aa10.64□□□□□ -0.71
AP000842.3-201ENST00000564354 POTEAQ6S8J7 498 aa10.64□□□□□ -0.71
AP000842.3-201ENST00000564354 USP17L1Q7RTZ2 530 aa10.64□□□□□ -0.71
AP000842.3-201ENST00000564354 TPCN2Q8NHX9 752 aa10.64□□□□□ -0.71
AP000842.3-201ENST00000564354 ATP1A2P50993 1020 aa10.63□□□□□ -0.71
AP000842.3-201ENST00000564354 HIRAP54198 1017 aaPredicted RBP10.63□□□□□ -0.71
AP000842.3-201ENST00000564354 NRG1Q02297 640 aaPredicted RBP10.63□□□□□ -0.71
AP000842.3-201ENST00000564354 TYRO3Q06418 890 aa10.63□□□□□ -0.71
AP000842.3-201ENST00000564354 CEP63Q96MT8 703 aa10.63□□□□□ -0.71
AP000842.3-201ENST00000564354 ANKIB1Q9P2G1 1089 aa10.63□□□□□ -0.71
AP000842.3-201ENST00000564354 KCNH4Q9UQ05 1017 aa10.63□□□□□ -0.71
AP000842.3-201ENST00000564354 CEP170Q5SW79 1584 aa10.63□□□□□ -0.71
AP000842.3-201ENST00000564354 ATP9BO43861 1147 aa10.62□□□□□ -0.71
AP000842.3-201ENST00000564354 HSH2DQ96JZ2 352 aa10.62□□□□□ -0.71
AP000842.3-201ENST00000564354 WRNQ14191 1432 aaPredicted RBP eCLIP10.61□□□□□ -0.71
AP000842.3-201ENST00000564354 HYAL3O43820 417 aaPredicted RBP10.61□□□□□ -0.71
AP000842.3-201ENST00000564354 PSMA6P60900 246 aaKnown RBP10.61□□□□□ -0.71
AP000842.3-201ENST00000564354 CCDC102BQ68D86 513 aa10.61□□□□□ -0.71
AP000842.3-201ENST00000564354 PLEKHM2Q8IWE5 1019 aa10.61□□□□□ -0.71
AP000842.3-201ENST00000564354 UCN2Q96RP3 112 aa10.61□□□□□ -0.71
AP000842.3-201ENST00000564354 SSBP4Q9BWG4 385 aaPredicted RBP10.61□□□□□ -0.71
AP000842.3-201ENST00000564354 MKRN1Q9UHC7 482 aaKnown RBP10.61□□□□□ -0.71
AP000842.3-201ENST00000564354 RAC1P63000 192 aa10.6□□□□□ -0.71
AP000842.3-201ENST00000564354 ILDR2Q71H61 639 aa10.6□□□□□ -0.71
AP000842.3-201ENST00000564354 PROSER2Q86WR7 435 aaPredicted RBP10.6□□□□□ -0.71
AP000842.3-201ENST00000564354 KIAA1024Q9UPX6 916 aa10.6□□□□□ -0.71
AP000842.3-201ENST00000564354 RBM19Q9Y4C8 960 aaKnown RBP10.6□□□□□ -0.71
AP000842.3-201ENST00000564354 ADAMTS12P58397 1594 aa10.6□□□□□ -0.71
AP000842.3-201ENST00000564354 NUP160Q12769 1436 aa10.59□□□□□ -0.71
AP000842.3-201ENST00000564354 SFI1A8K8P3 1242 aa10.59□□□□□ -0.71
AP000842.3-201ENST00000564354 SUPT5HO00267 1087 aaKnown RBP10.59□□□□□ -0.71
AP000842.3-201ENST00000564354 ZBTB7BO15156 539 aaPredicted RBP10.59□□□□□ -0.71
AP000842.3-201ENST00000564354 CLDN10P78369 228 aa10.59□□□□□ -0.71
AP000842.3-201ENST00000564354 FAM69CQ0P6D2 419 aa10.59□□□□□ -0.71
AP000842.3-201ENST00000564354 SHISA2Q6UWI4 295 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms