RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 PRPHP41219 470 aa6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 EIF4G2P78344 907 aaKnown RBP eCLIP6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 MRRFQ96E11 262 aaKnown RBP6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 VMP1Q96GC9 406 aa6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 RPS6KC1Q96S38 1066 aa6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 CCDC39Q9UFE4 941 aa6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 TMCC3Q9ULS5 477 aa6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 PCF11O94913 1555 aaKnown RBP6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 GOLGA6L10A6NI86 522 aa6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 CDC37L1Q7L3B6 337 aa6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 FAM81BQ96LP2 452 aa6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 MMTAG2Q9BU76 263 aaKnown RBP6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 NACA2Q9H009 215 aa6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 SERPINA10Q9UK55 444 aa6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 SUGP1Q8IWZ8 645 aaKnown RBP6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 STAG2Q8N3U4 1231 aa6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 BACH2Q9BYV9 841 aa6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 REC8O95072 547 aa6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 TRIM21P19474 475 aaKnown RBP6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 TPP2P29144 1249 aaPredicted RBP6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 COL19A1Q14993 1142 aa6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 KRT72Q14CN4 511 aa6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 NBPF8Q3BBV2 869 aa6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 ARHGEF25Q86VW2 580 aa6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 UHMK1Q8TAS1 419 aaKnown RBP6.92□□□□□ -1.3
TUBGCP4-207ENST00000563963 HOXA2O43364 376 aa6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 IGHDP01880 384 aa6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 SFSWAPQ12872 951 aaKnown RBP6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 CCDC186Q7Z3E2 898 aa6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 IFNLR1Q8IU57 520 aaPredicted RBP6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 MYO1CO00159 1063 aa6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 HNRNPH2P55795 449 aaKnown RBP6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 CCDC152Q4G0S7 254 aa6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 LEKR1Q6ZMV7 388 aa6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 KIAA1328Q86T90 577 aa6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 NCAPG2Q86XI2 1143 aa6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 ANKRD18AQ8IVF6 992 aa6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 PPM1EQ8WY54 764 aa6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 RUFY1Q96T51 708 aa6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 CHMP5Q9NZZ3 219 aa6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 G3BP2Q9UN86 482 aaKnown RBP6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 AKNAQ7Z591 1439 aa6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 TRIM37O94972 964 aa6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 SAFB2Q14151 953 aaKnown RBP eCLIP6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 PRPF38AQ8NAV1 312 aaKnown RBP6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 CCDC102AQ96A19 550 aa6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 TCEAL9Q9UHQ7 104 aa6.91□□□□□ -1.3
TUBGCP4-207ENST00000563963 E2F6O75461 281 aa6.9□□□□□ -1.3
TUBGCP4-207ENST00000563963 FCHSD2O94868 740 aa6.9□□□□□ -1.3
TUBGCP4-207ENST00000563963 SNUPNO95149 360 aaKnown RBP6.9□□□□□ -1.3
TUBGCP4-207ENST00000563963 PPP4CP60510 307 aa6.9□□□□□ -1.3
TUBGCP4-207ENST00000563963 GOLGA2Q08379 1002 aa6.9□□□□□ -1.3
TUBGCP4-207ENST00000563963 FAM76AQ8TAV0 307 aa6.9□□□□□ -1.3
TUBGCP4-207ENST00000563963 UBAP1Q9NZ09 502 aa6.9□□□□□ -1.3
TUBGCP4-207ENST00000563963 RPS6KA3P51812 740 aa6.9□□□□□ -1.3
TUBGCP4-207ENST00000563963 WASHC5Q12768 1159 aa6.9□□□□□ -1.3
TUBGCP4-207ENST00000563963 E2F4Q16254 413 aa6.9□□□□□ -1.3
TUBGCP4-207ENST00000563963 FAAH2Q6GMR7 532 aa6.9□□□□□ -1.3
TUBGCP4-207ENST00000563963 WAPLQ7Z5K2 1190 aa6.9□□□□□ -1.3
TUBGCP4-207ENST00000563963 USP33Q8TEY7 942 aa6.9□□□□□ -1.3
TUBGCP4-207ENST00000563963 THOC1Q96FV9 657 aaKnown RBP6.9□□□□□ -1.3
TUBGCP4-207ENST00000563963 KLF15Q9UIH9 416 aa6.9□□□□□ -1.3
TUBGCP4-207ENST00000563963 TMA7Q9Y2S6 64 aaKnown RBP6.9□□□□□ -1.3
TUBGCP4-207ENST00000563963 CCDC30Q5VVM6 783 aa6.9□□□□□ -1.31
TUBGCP4-207ENST00000563963 RNF168Q8IYW5 571 aaPredicted RBP6.9□□□□□ -1.31
TUBGCP4-207ENST00000563963 TRMT1Q9NXH9 659 aaKnown RBP6.9□□□□□ -1.31
TUBGCP4-207ENST00000563963 ZNF132P52740 706 aa6.9□□□□□ -1.31
TUBGCP4-207ENST00000563963 EIF2B5Q13144 721 aaKnown RBP6.9□□□□□ -1.31
TUBGCP4-207ENST00000563963 MMS22LQ6ZRQ5 1243 aa6.9□□□□□ -1.31
TUBGCP4-207ENST00000563963 MICALCLQ6ZW33 695 aa6.9□□□□□ -1.31
TUBGCP4-207ENST00000563963 SLF2Q8IX21 1173 aa6.9□□□□□ -1.31
TUBGCP4-207ENST00000563963 DRAXINQ8NBI3 349 aaPredicted RBP6.9□□□□□ -1.31
TUBGCP4-207ENST00000563963 CDK5RAP3Q96JB5 506 aa6.9□□□□□ -1.31
TUBGCP4-207ENST00000563963 MAK16Q9BXY0 300 aaKnown RBP6.9□□□□□ -1.31
TUBGCP4-207ENST00000563963 IGSF5Q9NSI5 407 aa6.9□□□□□ -1.31
TUBGCP4-207ENST00000563963 ATP8A1Q9Y2Q0 1164 aa6.9□□□□□ -1.31
TUBGCP4-207ENST00000563963 REREQ9P2R6 1566 aa6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 DDX11L8A8MPP1 907 aa6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 CD53P19397 219 aa6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 ICA1Q05084 483 aa6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 MUM1L1Q5H9M0 696 aa6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 SCLT1Q96NL6 688 aa6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 TRAK1Q9UPV9 953 aa6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 ZNF652Q9Y2D9 606 aa6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 USP5P45974 858 aa6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 XPCQ01831 940 aaPredicted RBP6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 FXNQ16595 210 aa6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 NDUFAF2Q8N183 169 aa6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 FNBP4Q8N3X1 1017 aaPredicted RBP6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 RBM46Q8TBY0 533 aaKnown RBP6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 TATDN2Q93075 761 aa6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 SFMBT1Q9UHJ3 866 aa6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 SCINQ9Y6U3 715 aa6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 U2AF2P26368 475 aaKnown RBP eCLIP6.89□□□□□ -1.313e-12■■■■□ 20.3
TUBGCP4-207ENST00000563963 SEPT7Q16181 437 aaKnown RBP6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 GBP6Q6ZN66 633 aa6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 TEX11Q8IYF3 940 aa6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 GPATCH3Q96I76 525 aa6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 BAG1Q99933 345 aaPredicted RBP6.89□□□□□ -1.31
TUBGCP4-207ENST00000563963 SPATA7Q9P0W8 599 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms