RNA–Protein interactions for RNA: ENST00000563668.5

SPSB3-202, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 1,509 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-202ENST00000563668 ANKRD13DQ6ZTN6 518 aa21.94■■□□□ 1.1
SPSB3-202ENST00000563668 NLRP10Q86W26 655 aa21.94■■□□□ 1.1
SPSB3-202ENST00000563668 HYPKQ9NX55 129 aa21.94■■□□□ 1.1
SPSB3-202ENST00000563668 CACNA1SQ13698 1873 aa21.93■■□□□ 1.1
SPSB3-202ENST00000563668 PLBD2Q8NHP8 589 aa21.93■■□□□ 1.1
SPSB3-202ENST00000563668 IBTKQ9P2D0 1353 aaPredicted RBP21.92■■□□□ 1.1
SPSB3-202ENST00000563668 RNF123Q5XPI4 1314 aa21.92■■□□□ 1.1
SPSB3-202ENST00000563668 FANCIQ9NVI1 1328 aa21.92■■□□□ 1.1
SPSB3-202ENST00000563668 SBF1O95248 1867 aa21.92■■□□□ 1.1
SPSB3-202ENST00000563668 NPR1P16066 1061 aa21.92■■□□□ 1.1
SPSB3-202ENST00000563668 OLFM4Q6UX06 510 aa21.92■■□□□ 1.1
SPSB3-202ENST00000563668 WDR63Q8IWG1 891 aa21.92■■□□□ 1.1
SPSB3-202ENST00000563668 CNKSR1Q969H4 720 aa21.92■■□□□ 1.1
SPSB3-202ENST00000563668 CRY2Q49AN0 593 aa21.91■■□□□ 1.1
SPSB3-202ENST00000563668 PARP10Q53GL7 1025 aa21.91■■□□□ 1.1
SPSB3-202ENST00000563668 C7orf43Q8WVR3 580 aa21.91■■□□□ 1.1
SPSB3-202ENST00000563668 UTP14AQ9BVJ6 771 aaKnown RBP21.91■■□□□ 1.1
SPSB3-202ENST00000563668 RNF181Q9P0P0 153 aa21.91■■□□□ 1.1
SPSB3-202ENST00000563668 ANKRD36CQ5JPF3 1778 aa21.91■■□□□ 1.1
SPSB3-202ENST00000563668 ATP5J2-PTCD1G3V325 749 aa21.9■■□□□ 1.1
SPSB3-202ENST00000563668 PPP1R42Q7Z4L9 355 aa21.9■■□□□ 1.1
SPSB3-202ENST00000563668 SLC51AQ86UW1 340 aa21.9■■□□□ 1.1
SPSB3-202ENST00000563668 TWISTNBQ3B726 338 aaPredicted RBP21.9■■□□□ 1.1
SPSB3-202ENST00000563668 HSP90AB3PQ58FF7 597 aa21.9■■□□□ 1.1
SPSB3-202ENST00000563668 CCDC30Q5VVM6 783 aa21.89■■□□□ 1.09
SPSB3-202ENST00000563668 ISCA1Q9BUE6 129 aa21.89■■□□□ 1.09
SPSB3-202ENST00000563668 SLC10A5Q5PT55 438 aa21.88■■□□□ 1.09
SPSB3-202ENST00000563668 GPBP1L1Q9HC44 474 aaPredicted RBP21.88■■□□□ 1.09
SPSB3-202ENST00000563668 ARFGEF2Q9Y6D5 1785 aa21.87■■□□□ 1.09
SPSB3-202ENST00000563668 HCLS1P14317 486 aaPredicted RBP21.87■■□□□ 1.09
SPSB3-202ENST00000563668 IRX6P78412 446 aaPredicted RBP21.87■■□□□ 1.09
SPSB3-202ENST00000563668 EXOSC9Q06265 439 aaKnown RBP21.87■■□□□ 1.09
SPSB3-202ENST00000563668 G2E3Q7L622 706 aa21.87■■□□□ 1.09
SPSB3-202ENST00000563668 TRMT112Q9UI30 125 aaKnown RBP21.87■■□□□ 1.09
SPSB3-202ENST00000563668 RIC1Q4ADV7 1423 aa21.87■■□□□ 1.09
SPSB3-202ENST00000563668 FER1L6Q2WGJ9 1857 aa21.87■■□□□ 1.09
SPSB3-202ENST00000563668 RIC3Q7Z5B4 369 aa21.86■■□□□ 1.09
SPSB3-202ENST00000563668 ZNF521Q96K83 1311 aa21.86■■□□□ 1.09
SPSB3-202ENST00000563668 LMNB1P20700 586 aa21.85■■□□□ 1.09
SPSB3-202ENST00000563668 CCDC88AQ3V6T2 1871 aa21.85■■□□□ 1.09
SPSB3-202ENST00000563668 VAMP4O75379 141 aa21.85■■□□□ 1.09
SPSB3-202ENST00000563668 HOXA10P31260 410 aaPredicted RBP21.85■■□□□ 1.09
SPSB3-202ENST00000563668 ALDH1B1P30837 517 aa21.84■■□□□ 1.09
SPSB3-202ENST00000563668 GOLGA2Q08379 1002 aa21.84■■□□□ 1.09
SPSB3-202ENST00000563668 RTL5Q5HYW3 569 aaPredicted RBP21.84■■□□□ 1.09
SPSB3-202ENST00000563668 RPGRQ92834 1020 aaKnown RBP21.84■■□□□ 1.09
SPSB3-202ENST00000563668 FAM89AQ96GI7 184 aa21.84■■□□□ 1.09
SPSB3-202ENST00000563668 NLRP3Q96P20 1036 aa21.84■■□□□ 1.09
SPSB3-202ENST00000563668 MYD88Q99836 296 aa21.83■■□□□ 1.09
SPSB3-202ENST00000563668 SH3TC1Q8TE82 1336 aa21.83■■□□□ 1.08
SPSB3-202ENST00000563668 SLC4A2P04920 1241 aa21.82■■□□□ 1.08
SPSB3-202ENST00000563668 NMRK2Q9NPI5 230 aa21.82■■□□□ 1.08
SPSB3-202ENST00000563668 KIF3CO14782 793 aa21.81■■□□□ 1.08
SPSB3-202ENST00000563668 C1QTNF8P60827 252 aa21.81■■□□□ 1.08
SPSB3-202ENST00000563668 TRIM28Q13263 835 aaKnown RBP21.81■■□□□ 1.08
SPSB3-202ENST00000563668 TAOK3Q9H2K8 898 aa21.81■■□□□ 1.08
SPSB3-202ENST00000563668 MAP3K2Q9Y2U5 619 aa21.81■■□□□ 1.08
SPSB3-202ENST00000563668 LAMB2P55268 1798 aa21.81■■□□□ 1.08
SPSB3-202ENST00000563668 PI4KAP2A4QPH2 592 aa21.8■■□□□ 1.08
SPSB3-202ENST00000563668 CCDC93Q567U6 631 aa21.8■■□□□ 1.08
SPSB3-202ENST00000563668 PI4KAP1Q8N8J0 262 aa21.8■■□□□ 1.08
SPSB3-202ENST00000563668 JARID2Q92833 1246 aaPredicted RBP21.8■■□□□ 1.08
SPSB3-202ENST00000563668 CRAMP1Q96RY5 1269 aa21.8■■□□□ 1.08
SPSB3-202ENST00000563668 STK31Q9BXU1 1019 aa21.8■■□□□ 1.08
SPSB3-202ENST00000563668 SNED1Q8TER0 1413 aa21.8■■□□□ 1.08
SPSB3-202ENST00000563668 RBM17Q96I25 401 aaKnown RBP21.8■■□□□ 1.08
SPSB3-202ENST00000563668 METTL22Q9BUU2 404 aaPredicted RBP21.8■■□□□ 1.08
SPSB3-202ENST00000563668 PPP4R2Q9NY27 417 aa21.8■■□□□ 1.08
SPSB3-202ENST00000563668 LTBP3Q9NS15 1303 aa21.79■■□□□ 1.08
SPSB3-202ENST00000563668 KSR2Q6VAB6 950 aa21.79■■□□□ 1.08
SPSB3-202ENST00000563668 CDCA7LQ96GN5 454 aa21.79■■□□□ 1.08
SPSB3-202ENST00000563668 DDX60Q8IY21 1712 aaKnown RBP21.78■■□□□ 1.08
SPSB3-202ENST00000563668 SOGA3Q5TF21 947 aa21.78■■□□□ 1.08
SPSB3-202ENST00000563668 CHMP4AQ9BY43 222 aa21.78■■□□□ 1.08
SPSB3-202ENST00000563668 MYH16Q9H6N6 1097 aa21.78■■□□□ 1.08
SPSB3-202ENST00000563668 ZNF277Q9NRM2 450 aaPredicted RBP21.78■■□□□ 1.08
SPSB3-202ENST00000563668 ABCC4O15439 1325 aa21.78■■□□□ 1.08
SPSB3-202ENST00000563668 DDX58O95786 925 aaKnown RBP21.77■■□□□ 1.08
SPSB3-202ENST00000563668 IGKV5-2P06315 115 aa21.77■■□□□ 1.08
SPSB3-202ENST00000563668 TAF1P21675 1872 aa21.77■■□□□ 1.08
SPSB3-202ENST00000563668 TIAM2Q8IVF5 1701 aa21.76■■□□□ 1.07
SPSB3-202ENST00000563668 PPEF1O14829 653 aaPredicted RBP21.76■■□□□ 1.07
SPSB3-202ENST00000563668 FKBP4Q02790 459 aaKnown RBP eCLIP21.76■■□□□ 1.07
SPSB3-202ENST00000563668 COL4A1P02462 1669 aa21.76■■□□□ 1.07
SPSB3-202ENST00000563668 IRS4O14654 1257 aaPredicted RBP21.75■■□□□ 1.07
SPSB3-202ENST00000563668 FLIIQ13045 1269 aa21.75■■□□□ 1.07
SPSB3-202ENST00000563668 RRAGCQ9HB90 399 aa21.75■■□□□ 1.07
SPSB3-202ENST00000563668 CWF19L2Q2TBE0 894 aaKnown RBP21.75■■□□□ 1.07
SPSB3-202ENST00000563668 RTKN2Q8IZC4 609 aa21.75■■□□□ 1.07
SPSB3-202ENST00000563668 ZBTB38Q8NAP3 1195 aaPredicted RBP21.75■■□□□ 1.07
SPSB3-202ENST00000563668 CCDC191Q8NCU4 936 aa21.75■■□□□ 1.07
SPSB3-202ENST00000563668 RCAN3Q9UKA8 241 aa21.75■■□□□ 1.07
SPSB3-202ENST00000563668 DICER1Q9UPY3 1922 aaKnown RBP21.74■■□□□ 1.07
SPSB3-202ENST00000563668 CWC25Q9NXE8 425 aaPredicted RBP21.74■■□□□ 1.07
SPSB3-202ENST00000563668 ZC3H4Q9UPT8 1303 aaKnown RBP21.73■■□□□ 1.07
SPSB3-202ENST00000563668 GLTPD2A6NH11 291 aa21.73■■□□□ 1.07
SPSB3-202ENST00000563668 SF3B3Q15393 1217 aaKnown RBP21.73■■□□□ 1.07
SPSB3-202ENST00000563668 KDM2BQ8NHM5 1336 aa21.72■■□□□ 1.07
SPSB3-202ENST00000563668 ATP6V0A2Q9Y487 856 aa21.72■■□□□ 1.07
SPSB3-202ENST00000563668 PCCAP05165 728 aaPredicted RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms