RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 TTLL7Q6ZT98 887 aa24.7■■□□□ 1.54
NME3-204ENST00000563498 RPGRQ92834 1020 aaKnown RBP24.7■■□□□ 1.54
NME3-204ENST00000563498 CLEC11AQ9Y240 323 aa24.7■■□□□ 1.54
NME3-204ENST00000563498 RRP7AQ9Y3A4 280 aaKnown RBP24.7■■□□□ 1.54
NME3-204ENST00000563498 ERBB4Q15303 1308 aa24.69■■□□□ 1.54
NME3-204ENST00000563498 UBN2Q6ZU65 1347 aa24.69■■□□□ 1.54
NME3-204ENST00000563498 ZNF34Q8IZ26 560 aa24.68■■□□□ 1.54
NME3-204ENST00000563498 PNNQ9H307 717 aaKnown RBP24.68■■□□□ 1.54
NME3-204ENST00000563498 MYL6BP14649 208 aa24.67■■□□□ 1.54
NME3-204ENST00000563498 VEGFBP49765 207 aa24.67■■□□□ 1.54
NME3-204ENST00000563498 EIF6P56537 245 aaKnown RBP24.67■■□□□ 1.54
NME3-204ENST00000563498 CNTROBQ8N137 903 aa24.67■■□□□ 1.54
NME3-204ENST00000563498 CRAMP1Q96RY5 1269 aa24.67■■□□□ 1.54
NME3-204ENST00000563498 ZBTB3Q9H5J0 574 aa24.67■■□□□ 1.54
NME3-204ENST00000563498 FOXN1O15353 648 aa24.66■■□□□ 1.54
NME3-204ENST00000563498 GPTP24298 496 aa24.66■■□□□ 1.54
NME3-204ENST00000563498 SUSD4Q5VX71 490 aa24.66■■□□□ 1.54
NME3-204ENST00000563498 THUMPD2Q9BTF0 503 aaKnown RBP24.66■■□□□ 1.54
NME3-204ENST00000563498 PRDM10Q9NQV6 1147 aa24.66■■□□□ 1.54
NME3-204ENST00000563498 COL4A5P29400 1685 aa24.66■■□□□ 1.54
NME3-204ENST00000563498 NTSR2O95665 410 aa24.65■■□□□ 1.54
NME3-204ENST00000563498 MAP1SQ66K74 1059 aaPredicted RBP24.65■■□□□ 1.54
NME3-204ENST00000563498 GIGYF2Q6Y7W6 1299 aaKnown RBP24.65■■□□□ 1.54
NME3-204ENST00000563498 RBM17Q96I25 401 aaKnown RBP24.65■■□□□ 1.54
NME3-204ENST00000563498 MAPK8IP3Q9UPT6 1336 aa24.64■■□□□ 1.54
NME3-204ENST00000563498 RASSF10A6NK89 507 aa24.64■■□□□ 1.54
NME3-204ENST00000563498 AIDAQ96BJ3 306 aa24.64■■□□□ 1.54
NME3-204ENST00000563498 PPEF1O14829 653 aaPredicted RBP24.63■■□□□ 1.53
NME3-204ENST00000563498 PARP10Q53GL7 1025 aa24.63■■□□□ 1.53
NME3-204ENST00000563498 PPP1R42Q7Z4L9 355 aa24.63■■□□□ 1.53
NME3-204ENST00000563498 LMOD1P29536 600 aaPredicted RBP24.62■■□□□ 1.53
NME3-204ENST00000563498 CTCFP49711 727 aaPredicted RBP24.62■■□□□ 1.53
NME3-204ENST00000563498 LARGE2Q8N3Y3 721 aa24.62■■□□□ 1.53
NME3-204ENST00000563498 WBP1LQ9NX94 342 aa24.62■■□□□ 1.53
NME3-204ENST00000563498 GJA3Q9Y6H8 435 aa24.62■■□□□ 1.53
NME3-204ENST00000563498 DEFB115Q30KQ5 88 aa24.61■■□□□ 1.53
NME3-204ENST00000563498 LRP10Q7Z4F1 713 aa24.61■■□□□ 1.53
NME3-204ENST00000563498 LTBP1Q14766 1721 aa24.61■■□□□ 1.53
NME3-204ENST00000563498 SCNN1DP51172 638 aa24.6■■□□□ 1.53
NME3-204ENST00000563498 NLRP3Q96P20 1036 aa24.6■■□□□ 1.53
NME3-204ENST00000563498 VPS33BQ9H267 617 aa24.6■■□□□ 1.53
NME3-204ENST00000563498 SLC10A5Q5PT55 438 aa24.59■■□□□ 1.53
NME3-204ENST00000563498 C3orf67Q6ZVT6 689 aa24.59■■□□□ 1.53
NME3-204ENST00000563498 DDX21Q9NR30 783 aaKnown RBP eCLIP24.59■■□□□ 1.53
NME3-204ENST00000563498 BABAM1Q9NWV8 329 aa24.59■■□□□ 1.53
NME3-204ENST00000563498 TSPYL4Q9UJ04 414 aa24.59■■□□□ 1.53
NME3-204ENST00000563498 PDIA6Q15084 440 aa24.58■■□□□ 1.53
NME3-204ENST00000563498 NIM1KQ8IY84 436 aa24.58■■□□□ 1.53
NME3-204ENST00000563498 TMX4Q9H1E5 349 aaPredicted RBP24.58■■□□□ 1.53
NME3-204ENST00000563498 ATP6V0A2Q9Y487 856 aa24.58■■□□□ 1.53
NME3-204ENST00000563498 USP50Q70EL3 339 aaPredicted RBP24.57■■□□□ 1.52
NME3-204ENST00000563498 UTP14AQ9BVJ6 771 aaKnown RBP24.57■■□□□ 1.52
NME3-204ENST00000563498 EPS15P42566 896 aa24.56■■□□□ 1.52
NME3-204ENST00000563498 ABT1Q9ULW3 272 aaKnown RBP24.56■■□□□ 1.52
NME3-204ENST00000563498 WDR33Q9C0J8 1336 aaKnown RBP24.56■■□□□ 1.52
NME3-204ENST00000563498 TCERG1O14776 1098 aaKnown RBP24.55■■□□□ 1.52
NME3-204ENST00000563498 PPIP5K2O43314 1243 aa24.55■■□□□ 1.52
NME3-204ENST00000563498 SLC51AQ86UW1 340 aa24.55■■□□□ 1.52
NME3-204ENST00000563498 EIF2S2P20042 333 aaKnown RBP24.54■■□□□ 1.52
NME3-204ENST00000563498 RIPK4P57078 832 aa24.54■■□□□ 1.52
NME3-204ENST00000563498 MAP2K1Q02750 393 aaPredicted RBP24.54■■□□□ 1.52
NME3-204ENST00000563498 SUPT20HQ8NEM7 779 aa24.54■■□□□ 1.52
NME3-204ENST00000563498 RTFDC1Q9BY42 306 aaPredicted RBP24.54■■□□□ 1.52
NME3-204ENST00000563498 ABCC4O15439 1325 aa24.54■■□□□ 1.52
NME3-204ENST00000563498 HSP90AB3PQ58FF7 597 aa24.53■■□□□ 1.52
NME3-204ENST00000563498 THSD7BQ9C0I4 1608 aa24.53■■□□□ 1.52
NME3-204ENST00000563498 ANKRD36CQ5JPF3 1778 aa24.52■■□□□ 1.52
NME3-204ENST00000563498 BBOX1O75936 387 aa24.52■■□□□ 1.52
NME3-204ENST00000563498 LBX1P52954 281 aa24.52■■□□□ 1.52
NME3-204ENST00000563498 LMOD3Q0VAK6 560 aa24.52■■□□□ 1.52
NME3-204ENST00000563498 AOC3Q16853 763 aa24.52■■□□□ 1.52
NME3-204ENST00000563498 PROSER3Q2NL68 480 aa24.52■■□□□ 1.52
NME3-204ENST00000563498 ADARB2Q9NS39 739 aaKnown RBP24.51■■□□□ 1.51
NME3-204ENST00000563498 GPRC5DQ9NZD1 345 aa24.51■■□□□ 1.51
NME3-204ENST00000563498 ZNRF3Q9ULT6 936 aa24.51■■□□□ 1.51
NME3-204ENST00000563498 HSPA8P11142 646 aaKnown RBP24.5■■□□□ 1.51
NME3-204ENST00000563498 SP8Q8IXZ3 490 aa24.5■■□□□ 1.51
NME3-204ENST00000563498 ANXA1P04083 346 aa24.49■■□□□ 1.51
NME3-204ENST00000563498 ECE1P42892 770 aa24.49■■□□□ 1.51
NME3-204ENST00000563498 CXCL9Q07325 125 aa24.49■■□□□ 1.51
NME3-204ENST00000563498 COPS6Q7L5N1 327 aa24.49■■□□□ 1.51
NME3-204ENST00000563498 NLRP10Q86W26 655 aa24.49■■□□□ 1.51
NME3-204ENST00000563498 CDHR2Q9BYE9 1310 aa24.49■■□□□ 1.51
NME3-204ENST00000563498 TRPM7Q96QT4 1865 aa24.49■■□□□ 1.51
NME3-204ENST00000563498 TMPOP42166 694 aaKnown RBP24.48■■□□□ 1.51
NME3-204ENST00000563498 LAMB2P55268 1798 aa24.48■■□□□ 1.51
NME3-204ENST00000563498 RALBP1Q15311 655 aa24.48■■□□□ 1.51
NME3-204ENST00000563498 CST9Q5W186 159 aa24.48■■□□□ 1.51
NME3-204ENST00000563498 DPP8Q6V1X1 898 aaPredicted RBP24.48■■□□□ 1.51
NME3-204ENST00000563498 FMR1Q06787 632 aaKnown RBP eCLIP24.47■■□□□ 1.518e-6■■□□□ 11.8
NME3-204ENST00000563498 KIAA2012Q0VF49 1180 aa24.47■■□□□ 1.51
NME3-204ENST00000563498 TCIRG1Q13488 830 aa24.47■■□□□ 1.51
NME3-204ENST00000563498 MPNDQ8N594 471 aa24.47■■□□□ 1.51
NME3-204ENST00000563498 XAGE3Q8WTP9 111 aa24.47■■□□□ 1.51
NME3-204ENST00000563498 CAPNS2Q96L46 248 aa24.47■■□□□ 1.51
NME3-204ENST00000563498 SH3TC1Q8TE82 1336 aa24.46■■□□□ 1.51
NME3-204ENST00000563498 TRAF5O00463 557 aa24.46■■□□□ 1.51
NME3-204ENST00000563498 DDX46Q7L014 1031 aaKnown RBP24.46■■□□□ 1.51
NME3-204ENST00000563498 TLL2Q9Y6L7 1015 aa24.46■■□□□ 1.51
NME3-204ENST00000563498 HCLS1P14317 486 aaPredicted RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms