RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 CTNNA3Q9UI47 895 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 MRFAP1L1Q96HT8 127 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.17□□□□□ -1.265e-8■■■■■ 225.4
CLK3-212ENST00000563418 BSDC1Q9NW68 430 aaPredicted RBP7.17□□□□□ -1.26
CLK3-212ENST00000563418 NUCB1Q02818 461 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 CCDC57Q2TAC2 916 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 JPH2Q9BR39 696 aaPredicted RBP7.17□□□□□ -1.26
CLK3-212ENST00000563418 CWC25Q9NXE8 425 aaPredicted RBP7.17□□□□□ -1.26
CLK3-212ENST00000563418 ANAPC4Q9UJX5 808 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 RPGRIP1LQ68CZ1 1315 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 TEX11Q8IYF3 940 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 RABGGTAQ92696 567 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 PDLIM2Q96JY6 352 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 GOPCQ9HD26 462 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 MXRA7P84157 204 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 MAATS1Q7Z4T9 603 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 ZNF75DP51815 510 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 RWDD2BP57060 319 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 TAOK3Q9H2K8 898 aa7.17□□□□□ -1.26
CLK3-212ENST00000563418 VAV2P52735 878 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 HSP90AB2PQ58FF8 381 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 CKAP2LQ8IYA6 745 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 ACTR5Q9H9F9 607 aaPredicted RBP7.16□□□□□ -1.26
CLK3-212ENST00000563418 LMBRD1Q9NUN5 540 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 IRAK4Q9NWZ3 460 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 TTC41PQ6P2S7 1318 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 TACC1O75410 805 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 CDKL5O76039 1030 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 CPLX4Q7Z7G2 160 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 SMIM24O75264 130 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 RARSP54136 660 aaKnown RBP7.16□□□□□ -1.26
CLK3-212ENST00000563418 GIGYF1O75420 1035 aaPredicted RBP7.16□□□□□ -1.26
CLK3-212ENST00000563418 GOLGA8KD6RF30 607 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 KIF4AO95239 1232 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 PEX19P40855 299 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 CROCCP2Q86T23 111 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 NOB1Q9ULX3 412 aaKnown RBP7.16□□□□□ -1.26
CLK3-212ENST00000563418 PFDN1O60925 122 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 GBP5Q96PP8 586 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 ZNF215Q9UL58 517 aaPredicted RBP7.16□□□□□ -1.26
CLK3-212ENST00000563418 KIAA1107Q9UPP5 1409 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 GIMAP6Q6P9H5 292 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 SRLQ86TD4 932 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 CHCHD3Q9NX63 227 aaKnown RBP7.16□□□□□ -1.26
CLK3-212ENST00000563418 ERBINQ96RT1 1412 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 PRDM2Q13029 1718 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 GOLGA6BA6NDN3 693 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 IQCA1Q86XH1 822 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 ANKRD7Q92527 254 aa7.16□□□□□ -1.26
CLK3-212ENST00000563418 GCFC2P16383 781 aaKnown RBP7.15□□□□□ -1.26
CLK3-212ENST00000563418 NCBP1Q09161 790 aaKnown RBP7.15□□□□□ -1.26
CLK3-212ENST00000563418 PABPN1Q86U42 306 aaKnown RBP eCLIP7.15□□□□□ -1.263e-7■□□□□ 9.5
CLK3-212ENST00000563418 SMARCA4P51532 1647 aa7.15□□□□□ -1.26
CLK3-212ENST00000563418 PHLPP2Q6ZVD8 1323 aa7.15□□□□□ -1.26
CLK3-212ENST00000563418 SOX12O15370 315 aa7.15□□□□□ -1.26
CLK3-212ENST00000563418 EPS15P42566 896 aa7.15□□□□□ -1.26
CLK3-212ENST00000563418 BRPF1P55201 1214 aaPredicted RBP7.15□□□□□ -1.26
CLK3-212ENST00000563418 SEPT2Q15019 361 aa7.15□□□□□ -1.26
CLK3-212ENST00000563418 ZSCAN25Q6NSZ9 544 aa7.15□□□□□ -1.26
CLK3-212ENST00000563418 TCP11L2Q8N4U5 519 aa7.15□□□□□ -1.26
CLK3-212ENST00000563418 EIF3CLB5ME19 914 aaKnown RBP7.15□□□□□ -1.26
CLK3-212ENST00000563418 EIF3CQ99613 913 aaKnown RBP7.15□□□□□ -1.26
CLK3-212ENST00000563418 ESF1Q9H501 851 aaKnown RBP7.15□□□□□ -1.26
CLK3-212ENST00000563418 RPRD2Q5VT52 1461 aaKnown RBP7.15□□□□□ -1.26
CLK3-212ENST00000563418 CCDC151A5D8V7 595 aa7.15□□□□□ -1.26
CLK3-212ENST00000563418 APBA1Q02410 837 aa7.15□□□□□ -1.26
CLK3-212ENST00000563418 ATL3Q6DD88 541 aa7.15□□□□□ -1.26
CLK3-212ENST00000563418 CEP63Q96MT8 703 aa7.15□□□□□ -1.26
CLK3-212ENST00000563418 RALGAPBQ86X10 1494 aa7.15□□□□□ -1.26
CLK3-212ENST00000563418 FHOD3Q2V2M9 1422 aa7.15□□□□□ -1.27
CLK3-212ENST00000563418 E2F4Q16254 413 aa7.15□□□□□ -1.27
CLK3-212ENST00000563418 WHAMMQ8TF30 809 aa7.15□□□□□ -1.27
CLK3-212ENST00000563418 TCP11Q8WWU5 503 aa7.15□□□□□ -1.27
CLK3-212ENST00000563418 PTPRCP08575 1304 aa7.15□□□□□ -1.27
CLK3-212ENST00000563418 WDHD1O75717 1129 aaPredicted RBP7.15□□□□□ -1.27
CLK3-212ENST00000563418 RAB3IPQ96QF0 476 aaPredicted RBP7.15□□□□□ -1.27
CLK3-212ENST00000563418 KIAA1524Q8TCG1 905 aa7.15□□□□□ -1.27
CLK3-212ENST00000563418 TMX3Q96JJ7 454 aa7.15□□□□□ -1.27
CLK3-212ENST00000563418 ITGB1BP2Q9UKP3 347 aa7.15□□□□□ -1.27
CLK3-212ENST00000563418 F13A1P00488 732 aa7.14□□□□□ -1.27
CLK3-212ENST00000563418 IGHDP01880 384 aa7.14□□□□□ -1.27
CLK3-212ENST00000563418 LIG3P49916 1009 aa7.14□□□□□ -1.27
CLK3-212ENST00000563418 SETDB1Q15047 1291 aa7.14□□□□□ -1.27
CLK3-212ENST00000563418 HNRNPMP52272 730 aaKnown RBP eCLIP7.14□□□□□ -1.27
CLK3-212ENST00000563418 TSC22D3Q99576 134 aa7.14□□□□□ -1.27
CLK3-212ENST00000563418 RABGAP1Q9Y3P9 1069 aa7.14□□□□□ -1.27
CLK3-212ENST00000563418 PSDA5PKW4 1024 aaPredicted RBP7.14□□□□□ -1.27
CLK3-212ENST00000563418 CCT4P50991 539 aaKnown RBP7.14□□□□□ -1.27
CLK3-212ENST00000563418 CRYMQ14894 314 aa7.14□□□□□ -1.27
CLK3-212ENST00000563418 PHLDB2Q86SQ0 1253 aa7.14□□□□□ -1.27
CLK3-212ENST00000563418 TBC1D22AQ8WUA7 517 aa7.14□□□□□ -1.27
CLK3-212ENST00000563418 PSD3Q9NYI0 1048 aa7.14□□□□□ -1.27
CLK3-212ENST00000563418 THEGQ9P2T0 379 aa7.14□□□□□ -1.27
CLK3-212ENST00000563418 EVC2Q86UK5 1308 aa7.14□□□□□ -1.27
CLK3-212ENST00000563418 BLOC1S2Q6QNY1 142 aa7.14□□□□□ -1.27
CLK3-212ENST00000563418 FCHSD1Q86WN1 690 aa7.14□□□□□ -1.27
CLK3-212ENST00000563418 RNF10Q8N5U6 811 aaKnown RBP7.14□□□□□ -1.27
CLK3-212ENST00000563418 PARD3Q8TEW0 1356 aa7.14□□□□□ -1.27
CLK3-212ENST00000563418 ZEB2O60315 1214 aa7.14□□□□□ -1.27
CLK3-212ENST00000563418 SLC3A2P08195 630 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms