RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 POTEJP0CG39 1038 aa20.38■□□□□ 0.85
USB1-208ENST00000563207 CCDC27Q2M243 656 aa20.38■□□□□ 0.85
USB1-208ENST00000563207 CRY2Q49AN0 593 aa20.38■□□□□ 0.85
USB1-208ENST00000563207 CCDC93Q567U6 631 aa20.38■□□□□ 0.85
USB1-208ENST00000563207 AIMP1Q12904 312 aaKnown RBP20.37■□□□□ 0.85
USB1-208ENST00000563207 DPY19L2Q6NUT2 758 aa20.37■□□□□ 0.85
USB1-208ENST00000563207 SYNE4Q8N205 404 aa20.37■□□□□ 0.85
USB1-208ENST00000563207 NYXQ9GZU5 481 aa20.37■□□□□ 0.85
USB1-208ENST00000563207 ERBB4Q15303 1308 aa20.36■□□□□ 0.85
USB1-208ENST00000563207 TCERG1O14776 1098 aaKnown RBP20.36■□□□□ 0.85
USB1-208ENST00000563207 CALD1Q05682 793 aaKnown RBP20.36■□□□□ 0.85
USB1-208ENST00000563207 COPS6Q7L5N1 327 aa20.36■□□□□ 0.85
USB1-208ENST00000563207 SMC1BQ8NDV3 1235 aa20.36■□□□□ 0.85
USB1-208ENST00000563207 XAGE3Q8WTP9 111 aa20.36■□□□□ 0.85
USB1-208ENST00000563207 BABAM1Q9NWV8 329 aa20.36■□□□□ 0.85
USB1-208ENST00000563207 SNED1Q8TER0 1413 aa20.36■□□□□ 0.85
USB1-208ENST00000563207 ZNF541Q9H0D2 1346 aa20.35■□□□□ 0.85
USB1-208ENST00000563207 FKBP4Q02790 459 aaKnown RBP eCLIP20.35■□□□□ 0.85
USB1-208ENST00000563207 SOGA3Q5TF21 947 aa20.35■□□□□ 0.85
USB1-208ENST00000563207 COL4A5P29400 1685 aa20.35■□□□□ 0.85
USB1-208ENST00000563207 ANKRD36CQ5JPF3 1778 aa20.34■□□□□ 0.85
USB1-208ENST00000563207 ALDH1B1P30837 517 aa20.34■□□□□ 0.85
USB1-208ENST00000563207 LAMB2P55268 1798 aa20.34■□□□□ 0.85
USB1-208ENST00000563207 CHPF2Q9P2E5 772 aa20.33■□□□□ 0.85
USB1-208ENST00000563207 HOXA10P31260 410 aaPredicted RBP20.32■□□□□ 0.84
USB1-208ENST00000563207 RPGRQ92834 1020 aaKnown RBP20.32■□□□□ 0.84
USB1-208ENST00000563207 TAF1P21675 1872 aa20.32■□□□□ 0.84
USB1-208ENST00000563207 IBTKQ9P2D0 1353 aaPredicted RBP20.32■□□□□ 0.84
USB1-208ENST00000563207 RIC1Q4ADV7 1423 aa20.31■□□□□ 0.84
USB1-208ENST00000563207 RTKN2Q8IZC4 609 aa20.31■□□□□ 0.84
USB1-208ENST00000563207 PCNTO95613 3336 aa20.3■□□□□ 0.84
USB1-208ENST00000563207 IARSP41252 1262 aaKnown RBP20.3■□□□□ 0.84
USB1-208ENST00000563207 KLRG1Q96E93 195 aa20.3■□□□□ 0.84
USB1-208ENST00000563207 UTP14AQ9BVJ6 771 aaKnown RBP20.3■□□□□ 0.84
USB1-208ENST00000563207 DDX21Q9NR30 783 aaKnown RBP eCLIP20.3■□□□□ 0.84
USB1-208ENST00000563207 MBIPQ9NS73 344 aa20.3■□□□□ 0.84
USB1-208ENST00000563207 HCLS1P14317 486 aaPredicted RBP20.29■□□□□ 0.84
USB1-208ENST00000563207 PPP1R42Q7Z4L9 355 aa20.29■□□□□ 0.84
USB1-208ENST00000563207 NLRP10Q86W26 655 aa20.29■□□□□ 0.84
USB1-208ENST00000563207 WWC1Q8IX03 1113 aa20.29■□□□□ 0.84
USB1-208ENST00000563207 TCIRG1Q13488 830 aa20.28■□□□□ 0.84
USB1-208ENST00000563207 PARP10Q53GL7 1025 aa20.28■□□□□ 0.84
USB1-208ENST00000563207 SLC10A5Q5PT55 438 aa20.28■□□□□ 0.84
USB1-208ENST00000563207 HDGFL1Q5TGJ6 251 aa20.28■□□□□ 0.84
USB1-208ENST00000563207 CFAP44Q96MT7 982 aa20.28■□□□□ 0.84
USB1-208ENST00000563207 PPEF1O14829 653 aaPredicted RBP20.27■□□□□ 0.84
USB1-208ENST00000563207 DUSP27Q5VZP5 1158 aa20.27■□□□□ 0.84
USB1-208ENST00000563207 WDR63Q8IWG1 891 aa20.27■□□□□ 0.84
USB1-208ENST00000563207 RBM17Q96I25 401 aaKnown RBP20.27■□□□□ 0.84
USB1-208ENST00000563207 CRAMP1Q96RY5 1269 aa20.27■□□□□ 0.84
USB1-208ENST00000563207 IL16Q14005 1332 aa20.27■□□□□ 0.83
USB1-208ENST00000563207 SCN4AP35499 1836 aa20.26■□□□□ 0.83
USB1-208ENST00000563207 FZD9O00144 591 aa20.26■□□□□ 0.83
USB1-208ENST00000563207 ELL2O00472 640 aaPredicted RBP20.26■□□□□ 0.83
USB1-208ENST00000563207 ZNF853P0CG23 659 aa20.26■□□□□ 0.83
USB1-208ENST00000563207 GNAI1P63096 354 aa20.26■□□□□ 0.83
USB1-208ENST00000563207 L3MBTL3Q96JM7 780 aaPredicted RBP20.26■□□□□ 0.83
USB1-208ENST00000563207 NLRP3Q96P20 1036 aa20.26■□□□□ 0.83
USB1-208ENST00000563207 PSMD1Q99460 953 aa20.26■□□□□ 0.83
USB1-208ENST00000563207 TAF1DQ9H5J8 278 aaPredicted RBP20.26■□□□□ 0.83
USB1-208ENST00000563207 IFT57Q9NWB7 429 aa20.26■□□□□ 0.83
USB1-208ENST00000563207 COL4A1P02462 1669 aa20.26■□□□□ 0.83
USB1-208ENST00000563207 ATP5J2-PTCD1G3V325 749 aa20.25■□□□□ 0.83
USB1-208ENST00000563207 CHADLQ6NUI6 762 aa20.25■□□□□ 0.83
USB1-208ENST00000563207 TRMT112Q9UI30 125 aaKnown RBP20.25■□□□□ 0.83
USB1-208ENST00000563207 ABCC4O15439 1325 aa20.25■□□□□ 0.83
USB1-208ENST00000563207 RNF123Q5XPI4 1314 aa20.25■□□□□ 0.83
USB1-208ENST00000563207 LTBP1Q14766 1721 aa20.24■□□□□ 0.83
USB1-208ENST00000563207 DDX60Q8IY21 1712 aaKnown RBP20.24■□□□□ 0.83
USB1-208ENST00000563207 JMYQ8N9B5 988 aa20.24■□□□□ 0.83
USB1-208ENST00000563207 ANKRD13DQ6ZTN6 518 aa20.23■□□□□ 0.83
USB1-208ENST00000563207 EAPPQ56P03 285 aaPredicted RBP20.22■□□□□ 0.83
USB1-208ENST00000563207 RTL5Q5HYW3 569 aaPredicted RBP20.22■□□□□ 0.83
USB1-208ENST00000563207 C8orf58Q8NAV2 365 aa20.22■□□□□ 0.83
USB1-208ENST00000563207 PLBD2Q8NHP8 589 aa20.22■□□□□ 0.83
USB1-208ENST00000563207 PHAXQ9H814 394 aaKnown RBP20.22■□□□□ 0.83
USB1-208ENST00000563207 DBF4Q9UBU7 674 aaPredicted RBP20.22■□□□□ 0.83
USB1-208ENST00000563207 SALL2Q9Y467 1007 aaPredicted RBP20.22■□□□□ 0.83
USB1-208ENST00000563207 GJA3Q9Y6H8 435 aa20.22■□□□□ 0.83
USB1-208ENST00000563207 ADAMTSL1Q8N6G6 1762 aa20.21■□□□□ 0.83
USB1-208ENST00000563207 HSP90AB3PQ58FF7 597 aa20.21■□□□□ 0.83
USB1-208ENST00000563207 CC2D2BQ6DHV5 1058 aa20.21■□□□□ 0.83
USB1-208ENST00000563207 FAM89AQ96GI7 184 aa20.21■□□□□ 0.83
USB1-208ENST00000563207 ISCA1Q9BUE6 129 aa20.21■□□□□ 0.83
USB1-208ENST00000563207 ATP6V0A2Q9Y487 856 aa20.21■□□□□ 0.83
USB1-208ENST00000563207 ZNF521Q96K83 1311 aa20.21■□□□□ 0.83
USB1-208ENST00000563207 IQCA1LA6NCM1 817 aa20.2■□□□□ 0.82
USB1-208ENST00000563207 HOXB7P09629 217 aa20.2■□□□□ 0.82
USB1-208ENST00000563207 EPHX2P34913 555 aa20.2■□□□□ 0.82
USB1-208ENST00000563207 AOC3Q16853 763 aa20.2■□□□□ 0.82
USB1-208ENST00000563207 IFFO2Q5TF58 517 aa20.2■□□□□ 0.82
USB1-208ENST00000563207 LARGE2Q8N3Y3 721 aa20.2■□□□□ 0.82
USB1-208ENST00000563207 JDP2Q8WYK2 163 aa20.2■□□□□ 0.82
USB1-208ENST00000563207 HACL1Q9UJ83 578 aa20.2■□□□□ 0.82
USB1-208ENST00000563207 SH3TC1Q8TE82 1336 aa20.2■□□□□ 0.82
USB1-208ENST00000563207 TSPYL6Q8N831 410 aa20.19■□□□□ 0.82
USB1-208ENST00000563207 ITGBL1O95965 494 aaPredicted RBP20.18■□□□□ 0.82
USB1-208ENST00000563207 LDHDQ86WU2 507 aa20.18■□□□□ 0.82
USB1-208ENST00000563207 GPC2Q8N158 579 aa20.18■□□□□ 0.82
USB1-208ENST00000563207 PPIP5K2O43314 1243 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms