RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 FHDC1Q9C0D6 1143 aaPredicted RBP8.03□□□□□ -1.12
CNOT1-204ENST00000563130 PPP1R1BQ9UD71 204 aaPredicted RBP8.03□□□□□ -1.12
CNOT1-204ENST00000563130 TBC1D2BQ9UPU7 963 aa8.03□□□□□ -1.12
CNOT1-204ENST00000563130 POTEB2H3BUK9 544 aa8.03□□□□□ -1.12
CNOT1-204ENST00000563130 GTPBP6O43824 516 aaPredicted RBP8.03□□□□□ -1.12
CNOT1-204ENST00000563130 EIF2S2P20042 333 aaKnown RBP8.03□□□□□ -1.12
CNOT1-204ENST00000563130 DZIP3Q86Y13 1208 aaKnown RBP8.03□□□□□ -1.12
CNOT1-204ENST00000563130 C8orf58Q8NAV2 365 aa8.03□□□□□ -1.12
CNOT1-204ENST00000563130 TSR2Q969E8 191 aaKnown RBP8.03□□□□□ -1.12
CNOT1-204ENST00000563130 SCN7AQ01118 1682 aa8.02□□□□□ -1.12
CNOT1-204ENST00000563130 DDR1Q08345 913 aa8.02□□□□□ -1.13
CNOT1-204ENST00000563130 PROSER3Q2NL68 480 aa8.02□□□□□ -1.13
CNOT1-204ENST00000563130 CLEC4GQ6UXB4 293 aa8.02□□□□□ -1.13
CNOT1-204ENST00000563130 TSPYL6Q8N831 410 aa8.02□□□□□ -1.13
CNOT1-204ENST00000563130 BOLA1Q9Y3E2 137 aa8.02□□□□□ -1.13
CNOT1-204ENST00000563130 ZNF330Q9Y3S2 320 aaPredicted RBP8.02□□□□□ -1.13
CNOT1-204ENST00000563130 FANCIQ9NVI1 1328 aa8.02□□□□□ -1.13
CNOT1-204ENST00000563130 POLRMTO00411 1230 aaKnown RBP8.01□□□□□ -1.13
CNOT1-204ENST00000563130 NFIXQ14938 502 aa8.01□□□□□ -1.13
CNOT1-204ENST00000563130 HDGFL1Q5TGJ6 251 aa8.01□□□□□ -1.13
CNOT1-204ENST00000563130 NPM2Q86SE8 214 aaKnown RBP8.01□□□□□ -1.13
CNOT1-204ENST00000563130 SPRYD3Q8NCJ5 442 aa8.01□□□□□ -1.13
CNOT1-204ENST00000563130 DDX21Q9NR30 783 aaKnown RBP eCLIP8.01□□□□□ -1.13
CNOT1-204ENST00000563130 BCORQ6W2J9 1755 aa8.01□□□□□ -1.13
CNOT1-204ENST00000563130 ERVV-1B6SEH8 477 aa8.01□□□□□ -1.13
CNOT1-204ENST00000563130 MYL6BP14649 208 aa8.01□□□□□ -1.13
CNOT1-204ENST00000563130 CD2APQ9Y5K6 639 aa8.01□□□□□ -1.13
CNOT1-204ENST00000563130 ELL2O00472 640 aaPredicted RBP8□□□□□ -1.13
CNOT1-204ENST00000563130 ANXA1P04083 346 aa8□□□□□ -1.13
CNOT1-204ENST00000563130 TBC1D9BQ66K14 1250 aa8□□□□□ -1.13
CNOT1-204ENST00000563130 TTLL7Q6ZT98 887 aa8□□□□□ -1.13
CNOT1-204ENST00000563130 CHPF2Q9P2E5 772 aa8□□□□□ -1.13
CNOT1-204ENST00000563130 DBF4Q9UBU7 674 aaPredicted RBP8□□□□□ -1.13
CNOT1-204ENST00000563130 PARP3Q9Y6F1 533 aa8□□□□□ -1.13
CNOT1-204ENST00000563130 NRXN2Q9P2S2 1712 aa8□□□□□ -1.13
CNOT1-204ENST00000563130 C10orf71Q711Q0 1435 aa8□□□□□ -1.13
CNOT1-204ENST00000563130 MAP3K15Q6ZN16 1313 aa8□□□□□ -1.13
CNOT1-204ENST00000563130 HLFQ16534 295 aa8□□□□□ -1.13
CNOT1-204ENST00000563130 NECTIN2Q92692 538 aa8□□□□□ -1.13
CNOT1-204ENST00000563130 MYH16Q9H6N6 1097 aa8□□□□□ -1.13
CNOT1-204ENST00000563130 SCUBE2Q9NQ36 999 aa8□□□□□ -1.13
CNOT1-204ENST00000563130 VAMP4O75379 141 aa7.99□□□□□ -1.13
CNOT1-204ENST00000563130 TWISTNBQ3B726 338 aaPredicted RBP7.99□□□□□ -1.13
CNOT1-204ENST00000563130 COPS6Q7L5N1 327 aa7.99□□□□□ -1.13
CNOT1-204ENST00000563130 NLGN2Q8NFZ4 835 aa7.99□□□□□ -1.13
CNOT1-204ENST00000563130 CHMP4AQ9BY43 222 aa7.99□□□□□ -1.13
CNOT1-204ENST00000563130 ATP10DQ9P241 1426 aa7.99□□□□□ -1.13
CNOT1-204ENST00000563130 KIF13BQ9NQT8 1826 aa7.99□□□□□ -1.13
CNOT1-204ENST00000563130 SERPINB2P05120 415 aa7.99□□□□□ -1.13
CNOT1-204ENST00000563130 POTEJP0CG39 1038 aa7.99□□□□□ -1.13
CNOT1-204ENST00000563130 EXOSC9Q06265 439 aaKnown RBP7.99□□□□□ -1.13
CNOT1-204ENST00000563130 SLFN5Q08AF3 891 aa7.99□□□□□ -1.13
CNOT1-204ENST00000563130 GIGYF2Q6Y7W6 1299 aaKnown RBP7.99□□□□□ -1.13
CNOT1-204ENST00000563130 TRMT2AQ8IZ69 625 aaKnown RBP7.99□□□□□ -1.13
CNOT1-204ENST00000563130 XAGE3Q8WTP9 111 aa7.99□□□□□ -1.13
CNOT1-204ENST00000563130 HYPKQ9NX55 129 aa7.99□□□□□ -1.13
CNOT1-204ENST00000563130 ZNF652Q9Y2D9 606 aa7.99□□□□□ -1.13
CNOT1-204ENST00000563130 CARMIL3Q8ND23 1372 aa7.98□□□□□ -1.13
CNOT1-204ENST00000563130 E9PSI1 815 aa7.98□□□□□ -1.13
CNOT1-204ENST00000563130 CCDC30Q5VVM6 783 aa7.98□□□□□ -1.13
CNOT1-204ENST00000563130 KIF6Q6ZMV9 814 aa7.98□□□□□ -1.13
CNOT1-204ENST00000563130 C3orf67Q6ZVT6 689 aa7.98□□□□□ -1.13
CNOT1-204ENST00000563130 PAXIP1Q6ZW49 1069 aaPredicted RBP7.98□□□□□ -1.13
CNOT1-204ENST00000563130 TMEM121BQ9BXQ6 578 aaPredicted RBP7.98□□□□□ -1.13
CNOT1-204ENST00000563130 PPP1R37O75864 691 aa7.98□□□□□ -1.13
CNOT1-204ENST00000563130 TGFB2P61812 414 aa7.98□□□□□ -1.13
CNOT1-204ENST00000563130 BICDL1Q6ZP65 573 aa7.98□□□□□ -1.13
CNOT1-204ENST00000563130 MICALL2Q8IY33 904 aa7.98□□□□□ -1.13
CNOT1-204ENST00000563130 ZNF34Q8IZ26 560 aa7.98□□□□□ -1.13
CNOT1-204ENST00000563130 CDCA7LQ96GN5 454 aa7.98□□□□□ -1.13
CNOT1-204ENST00000563130 SETDB2Q96T68 719 aa7.98□□□□□ -1.13
CNOT1-204ENST00000563130 ZBTB3Q9H5J0 574 aa7.98□□□□□ -1.13
CNOT1-204ENST00000563130 UTRNP46939 3433 aa7.97□□□□□ -1.13
CNOT1-204ENST00000563130 AFDNP55196 1824 aaKnown RBP7.97□□□□□ -1.13
CNOT1-204ENST00000563130 KIAA1551Q9HCM1 1747 aa7.97□□□□□ -1.13
CNOT1-204ENST00000563130 PRR5LQ6MZQ0 368 aa7.97□□□□□ -1.13
CNOT1-204ENST00000563130 PHAXQ9H814 394 aaKnown RBP7.97□□□□□ -1.13
CNOT1-204ENST00000563130 NIP7Q9Y221 180 aaKnown RBP eCLIP7.97□□□□□ -1.13
CNOT1-204ENST00000563130 PXDNLA1KZ92 1463 aa7.97□□□□□ -1.13
CNOT1-204ENST00000563130 NUP98P52948 1817 aa7.97□□□□□ -1.13
CNOT1-204ENST00000563130 UBN2Q6ZU65 1347 aa7.97□□□□□ -1.13
CNOT1-204ENST00000563130 AIMP1Q12904 312 aaKnown RBP7.96□□□□□ -1.13
CNOT1-204ENST00000563130 ANKRD13DQ6ZTN6 518 aa7.96□□□□□ -1.13
CNOT1-204ENST00000563130 PLBD2Q8NHP8 589 aa7.96□□□□□ -1.13
CNOT1-204ENST00000563130 GOLGB1Q14789 3259 aaKnown RBP7.96□□□□□ -1.13
CNOT1-204ENST00000563130 KCNA3P22001 575 aa7.96□□□□□ -1.14
CNOT1-204ENST00000563130 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.96□□□□□ -1.14
CNOT1-204ENST00000563130 IBTKQ9P2D0 1353 aaPredicted RBP7.96□□□□□ -1.14
CNOT1-204ENST00000563130 TCIRG1Q13488 830 aa7.95□□□□□ -1.14
CNOT1-204ENST00000563130 STK31Q9BXU1 1019 aa7.95□□□□□ -1.14
CNOT1-204ENST00000563130 HNRNPUQ00839 825 aaKnown RBP eCLIP7.95□□□□□ -1.14
CNOT1-204ENST00000563130 HSP90AB3PQ58FF7 597 aa7.95□□□□□ -1.14
CNOT1-204ENST00000563130 TPTE2Q6XPS3 522 aa7.95□□□□□ -1.14
CNOT1-204ENST00000563130 NBPF5PQ86XG9 351 aaPredicted RBP7.95□□□□□ -1.14
CNOT1-204ENST00000563130 CNBD1Q8NA66 436 aa7.95□□□□□ -1.14
CNOT1-204ENST00000563130 BRIP1Q9BX63 1249 aa7.95□□□□□ -1.14
CNOT1-204ENST00000563130 A0A0G2JLW4 131 aa7.94□□□□□ -1.14
CNOT1-204ENST00000563130 KLRG2A4D1S0 409 aaPredicted RBP7.94□□□□□ -1.14
CNOT1-204ENST00000563130 TCERG1O14776 1098 aaKnown RBP7.94□□□□□ -1.14
CNOT1-204ENST00000563130 DPEP1P16444 411 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms