RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 SRCIN1Q9C0H9 1055 aa23.83■■□□□ 1.41
RAB40C-207ENST00000563109 ABCC4O15439 1325 aa23.83■■□□□ 1.4
RAB40C-207ENST00000563109 RNF123Q5XPI4 1314 aa23.83■■□□□ 1.4
RAB40C-207ENST00000563109 NEURL1BA8MQ27 555 aa23.82■■□□□ 1.4
RAB40C-207ENST00000563109 IGKV5-2P06315 115 aa23.82■■□□□ 1.4
RAB40C-207ENST00000563109 MS4A1P11836 297 aa23.82■■□□□ 1.4
RAB40C-207ENST00000563109 CCT4P50991 539 aaKnown RBP23.82■■□□□ 1.4
RAB40C-207ENST00000563109 ST5P78524 1137 aa23.82■■□□□ 1.4
RAB40C-207ENST00000563109 CWF19L2Q2TBE0 894 aaKnown RBP23.82■■□□□ 1.4
RAB40C-207ENST00000563109 BEND3Q5T5X7 828 aa23.82■■□□□ 1.4
RAB40C-207ENST00000563109 SUSD4Q5VX71 490 aa23.82■■□□□ 1.4
RAB40C-207ENST00000563109 ALDH1L1O75891 902 aa23.81■■□□□ 1.4
RAB40C-207ENST00000563109 PPP1R1BQ9UD71 204 aaPredicted RBP23.81■■□□□ 1.4
RAB40C-207ENST00000563109 TRMT112Q9UI30 125 aaKnown RBP23.81■■□□□ 1.4
RAB40C-207ENST00000563109 NTSR2O95665 410 aa23.8■■□□□ 1.4
RAB40C-207ENST00000563109 CLUAP1Q96AJ1 413 aa23.8■■□□□ 1.4
RAB40C-207ENST00000563109 LAMB2P55268 1798 aa23.8■■□□□ 1.4
RAB40C-207ENST00000563109 C10orf71Q711Q0 1435 aa23.79■■□□□ 1.4
RAB40C-207ENST00000563109 CENPBP07199 599 aaPredicted RBP23.79■■□□□ 1.4
RAB40C-207ENST00000563109 PRR5LQ6MZQ0 368 aa23.79■■□□□ 1.4
RAB40C-207ENST00000563109 DZIP1LQ8IYY4 767 aaKnown RBP23.79■■□□□ 1.4
RAB40C-207ENST00000563109 KIF13BQ9NQT8 1826 aa23.79■■□□□ 1.4
RAB40C-207ENST00000563109 SH3TC1Q8TE82 1336 aa23.79■■□□□ 1.4
RAB40C-207ENST00000563109 GCKRQ14397 625 aa23.78■■□□□ 1.4
RAB40C-207ENST00000563109 PLIN1O60240 522 aa23.77■■□□□ 1.4
RAB40C-207ENST00000563109 RRP1P56182 461 aaKnown RBP23.77■■□□□ 1.4
RAB40C-207ENST00000563109 NUTM1Q86Y26 1132 aa23.77■■□□□ 1.4
RAB40C-207ENST00000563109 ZBTB38Q8NAP3 1195 aaPredicted RBP23.77■■□□□ 1.4
RAB40C-207ENST00000563109 TNNQ9UQP3 1299 aa23.77■■□□□ 1.4
RAB40C-207ENST00000563109 PCCAP05165 728 aaPredicted RBP23.76■■□□□ 1.39
RAB40C-207ENST00000563109 KLHL34Q8N239 644 aa23.76■■□□□ 1.39
RAB40C-207ENST00000563109 ANKRD31Q8N7Z5 1873 aa23.76■■□□□ 1.39
RAB40C-207ENST00000563109 DDX60Q8IY21 1712 aaKnown RBP23.76■■□□□ 1.39
RAB40C-207ENST00000563109 HSP90B1P14625 803 aaKnown RBP23.75■■□□□ 1.39
RAB40C-207ENST00000563109 ERFEQ4G0M1 354 aa23.75■■□□□ 1.39
RAB40C-207ENST00000563109 INTS3Q68E01 1043 aaKnown RBP23.75■■□□□ 1.39
RAB40C-207ENST00000563109 C9orf78Q9NZ63 289 aaPredicted RBP23.75■■□□□ 1.39
RAB40C-207ENST00000563109 ABCC12Q96J65 1359 aa23.75■■□□□ 1.39
RAB40C-207ENST00000563109 RIC1Q4ADV7 1423 aa23.75■■□□□ 1.39
RAB40C-207ENST00000563109 RTL5Q5HYW3 569 aaPredicted RBP23.74■■□□□ 1.39
RAB40C-207ENST00000563109 FAM89AQ96GI7 184 aa23.74■■□□□ 1.39
RAB40C-207ENST00000563109 TNRC6CQ9HCJ0 1690 aaKnown RBP23.73■■□□□ 1.39
RAB40C-207ENST00000563109 GRM8O00222 908 aa23.73■■□□□ 1.39
RAB40C-207ENST00000563109 UBE3BQ7Z3V4 1068 aa23.73■■□□□ 1.39
RAB40C-207ENST00000563109 CCDC24Q8N4L8 307 aa23.73■■□□□ 1.39
RAB40C-207ENST00000563109 TMEM57Q8N5G2 664 aa23.73■■□□□ 1.39
RAB40C-207ENST00000563109 PDE6BP35913 854 aa23.72■■□□□ 1.39
RAB40C-207ENST00000563109 PDE3AQ14432 1141 aa23.72■■□□□ 1.39
RAB40C-207ENST00000563109 ITPRIPQ8IWB1 547 aa23.72■■□□□ 1.39
RAB40C-207ENST00000563109 PANK1Q8TE04 598 aa23.72■■□□□ 1.39
RAB40C-207ENST00000563109 BRIP1Q9BX63 1249 aa23.72■■□□□ 1.39
RAB40C-207ENST00000563109 CD2APQ9Y5K6 639 aa23.72■■□□□ 1.39
RAB40C-207ENST00000563109 CDHR2Q9BYE9 1310 aa23.72■■□□□ 1.39
RAB40C-207ENST00000563109 MYH3P11055 1940 aa23.72■■□□□ 1.39
RAB40C-207ENST00000563109 H7C1W4 665 aa23.71■■□□□ 1.39
RAB40C-207ENST00000563109 IRS4O14654 1257 aaPredicted RBP23.71■■□□□ 1.39
RAB40C-207ENST00000563109 RLBP1P12271 317 aa23.7■■□□□ 1.38
RAB40C-207ENST00000563109 COL11A2P13942 1736 aaPredicted RBP23.7■■□□□ 1.38
RAB40C-207ENST00000563109 HCLS1P14317 486 aaPredicted RBP23.69■■□□□ 1.38
RAB40C-207ENST00000563109 SLC10A5Q5PT55 438 aa23.69■■□□□ 1.38
RAB40C-207ENST00000563109 JARID2Q92833 1246 aaPredicted RBP23.69■■□□□ 1.38
RAB40C-207ENST00000563109 NLRP3Q96P20 1036 aa23.69■■□□□ 1.38
RAB40C-207ENST00000563109 PDZRN3Q9UPQ7 1066 aa23.69■■□□□ 1.38
RAB40C-207ENST00000563109 SUPT16HQ9Y5B9 1047 aaKnown RBP23.69■■□□□ 1.38
RAB40C-207ENST00000563109 DLEC1Q9Y238 1755 aa23.69■■□□□ 1.38
RAB40C-207ENST00000563109 SYNE4Q8N205 404 aa23.68■■□□□ 1.38
RAB40C-207ENST00000563109 FHDC1Q9C0D6 1143 aaPredicted RBP23.68■■□□□ 1.38
RAB40C-207ENST00000563109 HDAC5Q9UQL6 1122 aa23.68■■□□□ 1.38
RAB40C-207ENST00000563109 KIAA1551Q9HCM1 1747 aa23.67■■□□□ 1.38
RAB40C-207ENST00000563109 UTYO14607 1347 aa23.67■■□□□ 1.38
RAB40C-207ENST00000563109 PDE8AO60658 829 aa23.67■■□□□ 1.38
RAB40C-207ENST00000563109 GNAI3P08754 354 aa23.67■■□□□ 1.38
RAB40C-207ENST00000563109 UBTFL1P0CB47 393 aaPredicted RBP23.67■■□□□ 1.38
RAB40C-207ENST00000563109 TGFB2P61812 414 aa23.67■■□□□ 1.38
RAB40C-207ENST00000563109 MVPQ14764 893 aaKnown RBP23.67■■□□□ 1.38
RAB40C-207ENST00000563109 CASP7P55210 303 aa23.66■■□□□ 1.38
RAB40C-207ENST00000563109 C2CD5Q86YS7 1000 aa23.66■■□□□ 1.38
RAB40C-207ENST00000563109 USP44Q9H0E7 712 aa23.66■■□□□ 1.38
RAB40C-207ENST00000563109 H0YIN7 160 aa23.65■■□□□ 1.38
RAB40C-207ENST00000563109 NBPF7P0C2Y1 421 aaPredicted RBP23.65■■□□□ 1.38
RAB40C-207ENST00000563109 C20orf194Q5TEA3 1177 aa23.65■■□□□ 1.38
RAB40C-207ENST00000563109 CHMP4BQ9H444 224 aaKnown RBP23.65■■□□□ 1.38
RAB40C-207ENST00000563109 DDX19BQ9UMR2 479 aa23.65■■□□□ 1.38
RAB40C-207ENST00000563109 COG6Q9Y2V7 657 aa23.65■■□□□ 1.38
RAB40C-207ENST00000563109 RPGRQ92834 1020 aaKnown RBP23.64■■□□□ 1.37
RAB40C-207ENST00000563109 MEIS3Q99687 375 aa23.64■■□□□ 1.37
RAB40C-207ENST00000563109 PLA2G12BQ9BX93 195 aa23.64■■□□□ 1.37
RAB40C-207ENST00000563109 CTSWP56202 376 aa23.63■■□□□ 1.37
RAB40C-207ENST00000563109 KLRG2A4D1S0 409 aaPredicted RBP23.62■■□□□ 1.37
RAB40C-207ENST00000563109 CCDC152Q4G0S7 254 aa23.62■■□□□ 1.37
RAB40C-207ENST00000563109 SUCLG2Q96I99 432 aa23.62■■□□□ 1.37
RAB40C-207ENST00000563109 CACNA1SQ13698 1873 aa23.62■■□□□ 1.37
RAB40C-207ENST00000563109 NPR1P16066 1061 aa23.61■■□□□ 1.37
RAB40C-207ENST00000563109 CHRNA5P30532 468 aa23.61■■□□□ 1.37
RAB40C-207ENST00000563109 CRY2Q49AN0 593 aa23.61■■□□□ 1.37
RAB40C-207ENST00000563109 C3orf67Q6ZVT6 689 aa23.61■■□□□ 1.37
RAB40C-207ENST00000563109 MASTLQ96GX5 879 aa23.61■■□□□ 1.37
RAB40C-207ENST00000563109 SYT17Q9BSW7 474 aa23.61■■□□□ 1.37
RAB40C-207ENST00000563109 BRCA1P38398 1863 aaKnown RBP23.6■■□□□ 1.37
RAB40C-207ENST00000563109 SRGNP10124 158 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms