RNA–Protein interactions for RNA: ENST00000562913.5

KLHDC4-210, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-210ENST00000562913 HOXB7P09629 217 aa21.34■■□□□ 1.01
KLHDC4-210ENST00000562913 ZNF853P0CG23 659 aa21.34■■□□□ 1.01
KLHDC4-210ENST00000562913 VEGFAP15692 232 aaPredicted RBP21.34■■□□□ 1.01
KLHDC4-210ENST00000562913 RPGRQ92834 1020 aaKnown RBP21.34■■□□□ 1.01
KLHDC4-210ENST00000562913 FKBP4Q02790 459 aaKnown RBP eCLIP21.33■■□□□ 1.01
KLHDC4-210ENST00000562913 DUSP27Q5VZP5 1158 aa21.33■■□□□ 1.01
KLHDC4-210ENST00000562913 C3orf67Q6ZVT6 689 aa21.33■■□□□ 1.01
KLHDC4-210ENST00000562913 UTP14AQ9BVJ6 771 aaKnown RBP21.33■■□□□ 1.01
KLHDC4-210ENST00000562913 ZNF316A6NFI3 1004 aaPredicted RBP21.32■■□□□ 1
KLHDC4-210ENST00000562913 HOXA10P31260 410 aaPredicted RBP21.32■■□□□ 1
KLHDC4-210ENST00000562913 APLP1P51693 650 aa21.32■■□□□ 1
KLHDC4-210ENST00000562913 HSP90AB3PQ58FF7 597 aa21.32■■□□□ 1
KLHDC4-210ENST00000562913 RTKN2Q8IZC4 609 aa21.32■■□□□ 1
KLHDC4-210ENST00000562913 ZNF277Q9NRM2 450 aaPredicted RBP21.32■■□□□ 1
KLHDC4-210ENST00000562913 IFT57Q9NWB7 429 aa21.32■■□□□ 1
KLHDC4-210ENST00000562913 WDR90Q96KV7 1748 aa21.32■■□□□ 1
KLHDC4-210ENST00000562913 CALD1Q05682 793 aaKnown RBP21.31■■□□□ 1
KLHDC4-210ENST00000562913 FSTL1Q12841 308 aa21.31■■□□□ 1
KLHDC4-210ENST00000562913 NLRP10Q86W26 655 aa21.31■■□□□ 1
KLHDC4-210ENST00000562913 DBF4Q9UBU7 674 aaPredicted RBP21.31■■□□□ 1
KLHDC4-210ENST00000562913 POTECB2RU33 542 aa21.3■■□□□ 1
KLHDC4-210ENST00000562913 GNAI1P63096 354 aa21.3■■□□□ 1
KLHDC4-210ENST00000562913 TCIRG1Q13488 830 aa21.3■■□□□ 1
KLHDC4-210ENST00000562913 RBM17Q96I25 401 aaKnown RBP21.3■■□□□ 1
KLHDC4-210ENST00000562913 NLRP3Q96P20 1036 aa21.3■■□□□ 1
KLHDC4-210ENST00000562913 DDNO94850 711 aaPredicted RBP21.29■■□□□ 1
KLHDC4-210ENST00000562913 SLC10A5Q5PT55 438 aa21.29■■□□□ 1
KLHDC4-210ENST00000562913 CRAMP1Q96RY5 1269 aa21.29■■□□□ 1
KLHDC4-210ENST00000562913 ELL2O00472 640 aaPredicted RBP21.28■■□□□ 1
KLHDC4-210ENST00000562913 SYNE4Q8N205 404 aa21.28■■□□□ 1
KLHDC4-210ENST00000562913 SMC1BQ8NDV3 1235 aa21.28■■□□□ 1
KLHDC4-210ENST00000562913 PLBD2Q8NHP8 589 aa21.28■■□□□ 1
KLHDC4-210ENST00000562913 ZNF428Q96B54 188 aa21.28■■□□□ 1
KLHDC4-210ENST00000562913 HYPKQ9NX55 129 aa21.28■■□□□ 1
KLHDC4-210ENST00000562913 SNED1Q8TER0 1413 aa21.28■■□□□ 1
KLHDC4-210ENST00000562913 RNF123Q5XPI4 1314 aa21.28■■□□□ 1
KLHDC4-210ENST00000562913 TCERG1O14776 1098 aaKnown RBP21.27■■□□□ 1
KLHDC4-210ENST00000562913 ANKRD13DQ6ZTN6 518 aa21.27■■□□□ 1
KLHDC4-210ENST00000562913 SLC51AQ86UW1 340 aa21.27■■□□□ 1
KLHDC4-210ENST00000562913 TRMT112Q9UI30 125 aaKnown RBP21.27■■□□□ 1
KLHDC4-210ENST00000562913 LAMB2P55268 1798 aa21.26■□□□□ 0.99
KLHDC4-210ENST00000562913 PPEF1O14829 653 aaPredicted RBP21.26■□□□□ 0.99
KLHDC4-210ENST00000562913 HCLS1P14317 486 aaPredicted RBP21.26■□□□□ 0.99
KLHDC4-210ENST00000562913 IARSP41252 1262 aaKnown RBP21.26■□□□□ 0.99
KLHDC4-210ENST00000562913 CC2D2BQ6DHV5 1058 aa21.26■□□□□ 0.99
KLHDC4-210ENST00000562913 PSMD1Q99460 953 aa21.26■□□□□ 0.99
KLHDC4-210ENST00000562913 ANP32CO43423 234 aa21.25■□□□□ 0.99
KLHDC4-210ENST00000562913 C8orf58Q8NAV2 365 aa21.25■□□□□ 0.99
KLHDC4-210ENST00000562913 MRS2Q9HD23 443 aa21.25■□□□□ 0.99
KLHDC4-210ENST00000562913 SH3TC1Q8TE82 1336 aa21.25■□□□□ 0.99
KLHDC4-210ENST00000562913 HTRA3P83110 453 aa21.24■□□□□ 0.99
KLHDC4-210ENST00000562913 ZNF541Q9H0D2 1346 aa21.24■□□□□ 0.99
KLHDC4-210ENST00000562913 ATP5J2-PTCD1G3V325 749 aa21.23■□□□□ 0.99
KLHDC4-210ENST00000562913 ISCA1Q9BUE6 129 aa21.23■□□□□ 0.99
KLHDC4-210ENST00000562913 ABCC4O15439 1325 aa21.23■□□□□ 0.99
KLHDC4-210ENST00000562913 DNAJC5GQ8N7S2 189 aa21.22■□□□□ 0.99
KLHDC4-210ENST00000562913 PHAXQ9H814 394 aaKnown RBP21.22■□□□□ 0.99
KLHDC4-210ENST00000562913 GRIPAP1Q4V328 841 aa21.21■□□□□ 0.99
KLHDC4-210ENST00000562913 TSR2Q969E8 191 aaKnown RBP21.21■□□□□ 0.99
KLHDC4-210ENST00000562913 L3MBTL3Q96JM7 780 aaPredicted RBP21.21■□□□□ 0.99
KLHDC4-210ENST00000562913 FZD9O00144 591 aa21.2■□□□□ 0.98
KLHDC4-210ENST00000562913 GOLGA2Q08379 1002 aa21.2■□□□□ 0.98
KLHDC4-210ENST00000562913 CCDC27Q2M243 656 aa21.2■□□□□ 0.98
KLHDC4-210ENST00000562913 RIC3Q7Z5B4 369 aa21.2■□□□□ 0.98
KLHDC4-210ENST00000562913 WWC1Q8IX03 1113 aa21.2■□□□□ 0.98
KLHDC4-210ENST00000562913 JDP2Q8WYK2 163 aa21.2■□□□□ 0.98
KLHDC4-210ENST00000562913 FAM89AQ96GI7 184 aa21.2■□□□□ 0.98
KLHDC4-210ENST00000562913 TMX4Q9H1E5 349 aaPredicted RBP21.2■□□□□ 0.98
KLHDC4-210ENST00000562913 ATP6V0A2Q9Y487 856 aa21.2■□□□□ 0.98
KLHDC4-210ENST00000562913 COL4A5P29400 1685 aa21.2■□□□□ 0.98
KLHDC4-210ENST00000562913 DDX60Q8IY21 1712 aaKnown RBP21.2■□□□□ 0.98
KLHDC4-210ENST00000562913 IQCA1LA6NCM1 817 aa21.19■□□□□ 0.98
KLHDC4-210ENST00000562913 POTEIP0CG38 1075 aa21.19■□□□□ 0.98
KLHDC4-210ENST00000562913 POTEJP0CG39 1038 aa21.19■□□□□ 0.98
KLHDC4-210ENST00000562913 DDX46Q7L014 1031 aaKnown RBP21.19■□□□□ 0.98
KLHDC4-210ENST00000562913 TSPYL6Q8N831 410 aa21.19■□□□□ 0.98
KLHDC4-210ENST00000562913 SCN4AP35499 1836 aa21.19■□□□□ 0.98
KLHDC4-210ENST00000562913 TAF1P21675 1872 aa21.19■□□□□ 0.98
KLHDC4-210ENST00000562913 BBOX1O75936 387 aa21.18■□□□□ 0.98
KLHDC4-210ENST00000562913 RTL5Q5HYW3 569 aaPredicted RBP21.18■□□□□ 0.98
KLHDC4-210ENST00000562913 CCDC30Q5VVM6 783 aa21.18■□□□□ 0.98
KLHDC4-210ENST00000562913 LARGE2Q8N3Y3 721 aa21.18■□□□□ 0.98
KLHDC4-210ENST00000562913 TRIM28Q13263 835 aaKnown RBP21.17■□□□□ 0.98
KLHDC4-210ENST00000562913 TAF1DQ9H5J8 278 aaPredicted RBP21.17■□□□□ 0.98
KLHDC4-210ENST00000562913 GRAPQ13588 217 aa21.16■□□□□ 0.98
KLHDC4-210ENST00000562913 CHADLQ6NUI6 762 aa21.16■□□□□ 0.98
KLHDC4-210ENST00000562913 SP8Q8IXZ3 490 aa21.16■□□□□ 0.98
KLHDC4-210ENST00000562913 GRAPLQ8TC17 118 aaPredicted RBP21.16■□□□□ 0.98
KLHDC4-210ENST00000562913 EIF6P56537 245 aaKnown RBP21.15■□□□□ 0.98
KLHDC4-210ENST00000562913 GPC2Q8N158 579 aa21.15■□□□□ 0.98
KLHDC4-210ENST00000562913 MYD88Q99836 296 aa21.15■□□□□ 0.98
KLHDC4-210ENST00000562913 CHMP4AQ9BY43 222 aa21.15■□□□□ 0.98
KLHDC4-210ENST00000562913 HACL1Q9UJ83 578 aa21.15■□□□□ 0.98
KLHDC4-210ENST00000562913 PPIP5K2O43314 1243 aa21.14■□□□□ 0.97
KLHDC4-210ENST00000562913 AOC3Q16853 763 aa21.14■□□□□ 0.97
KLHDC4-210ENST00000562913 SALL2Q9Y467 1007 aaPredicted RBP21.14■□□□□ 0.97
KLHDC4-210ENST00000562913 GJA3Q9Y6H8 435 aa21.14■□□□□ 0.97
KLHDC4-210ENST00000562913 IL16Q14005 1332 aa21.13■□□□□ 0.97
KLHDC4-210ENST00000562913 IRS4O14654 1257 aaPredicted RBP21.13■□□□□ 0.97
KLHDC4-210ENST00000562913 SF3B3Q15393 1217 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms