RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 PER1O15534 1290 aaPredicted RBP7.9□□□□□ -1.14
CDH13-206ENST00000562601 TRIM37O94972 964 aa7.9□□□□□ -1.14
CDH13-206ENST00000562601 NDUFV2P19404 249 aa7.9□□□□□ -1.14
CDH13-206ENST00000562601 GUCA2AQ02747 115 aa7.9□□□□□ -1.14
CDH13-206ENST00000562601 TUSC1Q2TAM9 212 aa7.9□□□□□ -1.14
CDH13-206ENST00000562601 MYSM1Q5VVJ2 828 aa7.9□□□□□ -1.14
CDH13-206ENST00000562601 RIC3Q7Z5B4 369 aa7.9□□□□□ -1.14
CDH13-206ENST00000562601 DEFB132Q7Z7B7 95 aa7.9□□□□□ -1.14
CDH13-206ENST00000562601 MARCH10Q8NA82 808 aaPredicted RBP7.9□□□□□ -1.14
CDH13-206ENST00000562601 FAM117AQ9C073 453 aa7.9□□□□□ -1.14
CDH13-206ENST00000562601 FAM208AQ9UK61 1670 aaKnown RBP7.89□□□□□ -1.15
CDH13-206ENST00000562601 DISP2A7MBM2 1401 aa7.89□□□□□ -1.15
CDH13-206ENST00000562601 RTL1A6NKG5 1358 aa7.89□□□□□ -1.15
CDH13-206ENST00000562601 FLT4P35916 1363 aa7.89□□□□□ -1.15
CDH13-206ENST00000562601 S1PR4O95977 384 aa7.89□□□□□ -1.15
CDH13-206ENST00000562601 IL2RBP14784 551 aa7.89□□□□□ -1.15
CDH13-206ENST00000562601 CLK2P49760 499 aaKnown RBP7.89□□□□□ -1.15
CDH13-206ENST00000562601 SF3B2Q13435 895 aaKnown RBP7.89□□□□□ -1.15
CDH13-206ENST00000562601 FAM196AQ6ZSG2 479 aa7.89□□□□□ -1.15
CDH13-206ENST00000562601 RETREG3Q86VR2 466 aa7.89□□□□□ -1.15
CDH13-206ENST00000562601 SBF2Q86WG5 1849 aa7.89□□□□□ -1.15
CDH13-206ENST00000562601 RGPD1P0DJD0 1748 aa7.89□□□□□ -1.15
CDH13-206ENST00000562601 INSRP06213 1382 aa7.88□□□□□ -1.15
CDH13-206ENST00000562601 MTMR2Q13614 643 aa7.88□□□□□ -1.15
CDH13-206ENST00000562601 SH3D19Q5HYK7 790 aa7.88□□□□□ -1.15
CDH13-206ENST00000562601 PRPF38BQ5VTL8 546 aaKnown RBP7.88□□□□□ -1.15
CDH13-206ENST00000562601 PTF1AQ7RTS3 328 aa7.88□□□□□ -1.15
CDH13-206ENST00000562601 CCDC125Q86Z20 511 aa7.88□□□□□ -1.15
CDH13-206ENST00000562601 DDX54Q8TDD1 881 aaKnown RBP7.88□□□□□ -1.15
CDH13-206ENST00000562601 CDCA7Q9BWT1 371 aaPredicted RBP7.88□□□□□ -1.15
CDH13-206ENST00000562601 ZBTB3Q9H5J0 574 aa7.88□□□□□ -1.15
CDH13-206ENST00000562601 TNS1Q9HBL0 1735 aaKnown RBP7.88□□□□□ -1.15
CDH13-206ENST00000562601 SMG6Q86US8 1419 aaKnown RBP7.87□□□□□ -1.15
CDH13-206ENST00000562601 NSD2O96028 1365 aa7.87□□□□□ -1.15
CDH13-206ENST00000562601 APBA3O96018 575 aa7.87□□□□□ -1.15
CDH13-206ENST00000562601 EIF4A2Q14240 407 aaKnown RBP7.87□□□□□ -1.15
CDH13-206ENST00000562601 SKIV2LQ15477 1246 aaKnown RBP7.87□□□□□ -1.15
CDH13-206ENST00000562601 ANKLE1Q8NAG6 615 aa7.87□□□□□ -1.15
CDH13-206ENST00000562601 ACSBG1Q96GR2 724 aa7.87□□□□□ -1.15
CDH13-206ENST00000562601 PCDHGC3Q9UN70 934 aa7.87□□□□□ -1.15
CDH13-206ENST00000562601 MEGF6O75095 1541 aa7.87□□□□□ -1.15
CDH13-206ENST00000562601 RNF223E7ERA6 249 aa7.86□□□□□ -1.15
CDH13-206ENST00000562601 KCNQ2O43526 872 aa7.86□□□□□ -1.15
CDH13-206ENST00000562601 EZH2Q15910 746 aaKnown RBP7.86□□□□□ -1.15
CDH13-206ENST00000562601 FAM160A2Q8N612 972 aaPredicted RBP7.86□□□□□ -1.15
CDH13-206ENST00000562601 SHANK3Q9BYB0 1731 aa7.86□□□□□ -1.15
CDH13-206ENST00000562601 OVOS2A0A0G2JMS6 1433 aa7.86□□□□□ -1.15
CDH13-206ENST00000562601 TNS2Q63HR2 1409 aa7.86□□□□□ -1.15
CDH13-206ENST00000562601 KIF24Q5T7B8 1368 aa7.85□□□□□ -1.15
CDH13-206ENST00000562601 TATP17735 454 aaPredicted RBP7.85□□□□□ -1.15
CDH13-206ENST00000562601 ZEB1P37275 1124 aaPredicted RBP7.85□□□□□ -1.15
CDH13-206ENST00000562601 BAG6P46379 1132 aa7.85□□□□□ -1.15
CDH13-206ENST00000562601 MTHFSP49914 203 aa7.85□□□□□ -1.15
CDH13-206ENST00000562601 DDX10Q13206 875 aaKnown RBP7.85□□□□□ -1.15
CDH13-206ENST00000562601 ZCRB1Q8TBF4 217 aaKnown RBP7.85□□□□□ -1.15
CDH13-206ENST00000562601 RAPGEF4Q8WZA2 1011 aa7.85□□□□□ -1.15
CDH13-206ENST00000562601 GOPCQ9HD26 462 aa7.85□□□□□ -1.15
CDH13-206ENST00000562601 JUNDP17535 347 aa7.84□□□□□ -1.15
CDH13-206ENST00000562601 MMP16P51512 607 aa7.84□□□□□ -1.15
CDH13-206ENST00000562601 SYMPKQ92797 1274 aaKnown RBP7.84□□□□□ -1.15
CDH13-206ENST00000562601 IRX2Q9BZI1 471 aaPredicted RBP7.84□□□□□ -1.15
CDH13-206ENST00000562601 POLR3EQ9NVU0 708 aa7.84□□□□□ -1.15
CDH13-206ENST00000562601 LIMD1Q9UGP4 676 aa7.84□□□□□ -1.15
CDH13-206ENST00000562601 DXOO77932 396 aaKnown RBP7.83□□□□□ -1.16
CDH13-206ENST00000562601 CSPP1Q1MSJ5 1256 aa7.83□□□□□ -1.16
CDH13-206ENST00000562601 DESI1Q6ICB0 168 aa7.83□□□□□ -1.16
CDH13-206ENST00000562601 AEBP1Q8IUX7 1158 aa7.83□□□□□ -1.16
CDH13-206ENST00000562601 IL27Q8NEV9 243 aa7.83□□□□□ -1.16
CDH13-206ENST00000562601 CAMKK2Q96RR4 588 aa7.83□□□□□ -1.16
CDH13-206ENST00000562601 PRDM9Q9NQV7 894 aa7.83□□□□□ -1.16
CDH13-206ENST00000562601 IL13P35225 146 aa7.82□□□□□ -1.16
CDH13-206ENST00000562601 PRR7Q8TB68 274 aa7.82□□□□□ -1.16
CDH13-206ENST00000562601 DOT1LQ8TEK3 1739 aa7.82□□□□□ -1.16
CDH13-206ENST00000562601 SYTL4Q96C24 671 aaPredicted RBP7.82□□□□□ -1.16
CDH13-206ENST00000562601 PCMTD1Q96MG8 357 aaPredicted RBP7.82□□□□□ -1.16
CDH13-206ENST00000562601 FCF1Q9Y324 198 aaKnown RBP7.82□□□□□ -1.16
CDH13-206ENST00000562601 PCDHB15Q9Y5E8 787 aa7.82□□□□□ -1.16
CDH13-206ENST00000562601 V9GY48 417 aaPredicted RBP7.82□□□□□ -1.16
CDH13-206ENST00000562601 BTAF1O14981 1849 aa7.82□□□□□ -1.16
CDH13-206ENST00000562601 NHSQ6T4R5 1651 aa7.82□□□□□ -1.16
CDH13-206ENST00000562601 NPC1L1Q9UHC9 1359 aa7.82□□□□□ -1.16
CDH13-206ENST00000562601 IGSF1Q8N6C5 1336 aa7.81□□□□□ -1.16
CDH13-206ENST00000562601 CYP27B1O15528 508 aa7.81□□□□□ -1.16
CDH13-206ENST00000562601 LILRB3O75022 631 aa7.81□□□□□ -1.16
CDH13-206ENST00000562601 HMOX1P09601 288 aa7.81□□□□□ -1.16
CDH13-206ENST00000562601 PPP2R1AP30153 589 aa7.81□□□□□ -1.16
CDH13-206ENST00000562601 SULT6B1Q6IMI4 303 aa7.81□□□□□ -1.16
CDH13-206ENST00000562601 PKD1L3Q7Z443 1732 aa7.81□□□□□ -1.16
CDH13-206ENST00000562601 ITGB4P16144 1822 aa7.8□□□□□ -1.16
CDH13-206ENST00000562601 RREB1Q92766 1687 aa7.8□□□□□ -1.16
CDH13-206ENST00000562601 NCAPD2Q15021 1401 aa7.8□□□□□ -1.16
CDH13-206ENST00000562601 PPEF1O14829 653 aaPredicted RBP7.8□□□□□ -1.16
CDH13-206ENST00000562601 U2SURPO15042 1029 aaKnown RBP7.8□□□□□ -1.16
CDH13-206ENST00000562601 DIAPH1O60610 1272 aaKnown RBP7.8□□□□□ -1.16
CDH13-206ENST00000562601 HELBQ8NG08 1087 aaPredicted RBP7.8□□□□□ -1.16
CDH13-206ENST00000562601 PRKD2Q9BZL6 878 aa7.8□□□□□ -1.16
CDH13-206ENST00000562601 SPG7Q9UQ90 795 aa7.8□□□□□ -1.16
CDH13-206ENST00000562601 NUP188Q5SRE5 1749 aa7.8□□□□□ -1.16
CDH13-206ENST00000562601 PCDH11XQ9BZA7 1347 aa7.79□□□□□ -1.16
CDH13-206ENST00000562601 PCDH11YQ9BZA8 1340 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms