RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 MAP3K2Q9Y2U5 619 aa17.17■□□□□ 0.34
CDH1-204ENST00000562118 GPTP24298 496 aa17.16■□□□□ 0.34
CDH1-204ENST00000562118 CRY2Q49AN0 593 aa17.16■□□□□ 0.34
CDH1-204ENST00000562118 PPP1R42Q7Z4L9 355 aa17.16■□□□□ 0.34
CDH1-204ENST00000562118 CCDC191Q8NCU4 936 aa17.16■□□□□ 0.34
CDH1-204ENST00000562118 FKBP5Q13451 457 aaPredicted RBP17.15■□□□□ 0.34
CDH1-204ENST00000562118 DNAAF4Q8WXU2 420 aa17.15■□□□□ 0.34
CDH1-204ENST00000562118 ST5P78524 1137 aa17.14■□□□□ 0.33
CDH1-204ENST00000562118 UTP14AQ9BVJ6 771 aaKnown RBP17.14■□□□□ 0.33
CDH1-204ENST00000562118 CACNA1SQ13698 1873 aa17.14■□□□□ 0.33
CDH1-204ENST00000562118 NEURL1BA8MQ27 555 aa17.13■□□□□ 0.33
CDH1-204ENST00000562118 PDE6BP35913 854 aa17.13■□□□□ 0.33
CDH1-204ENST00000562118 ERFEQ4G0M1 354 aa17.13■□□□□ 0.33
CDH1-204ENST00000562118 BEND3Q5T5X7 828 aa17.13■□□□□ 0.33
CDH1-204ENST00000562118 LINS1Q8NG48 757 aa17.13■□□□□ 0.33
CDH1-204ENST00000562118 ARHGAP45Q92619 1136 aa17.13■□□□□ 0.33
CDH1-204ENST00000562118 MYD88Q99836 296 aa17.13■□□□□ 0.33
CDH1-204ENST00000562118 ATP5J2-PTCD1G3V325 749 aa17.12■□□□□ 0.33
CDH1-204ENST00000562118 SRGNP10124 158 aa17.12■□□□□ 0.33
CDH1-204ENST00000562118 DPEP1P16444 411 aa17.12■□□□□ 0.33
CDH1-204ENST00000562118 NUTM1Q86Y26 1132 aa17.12■□□□□ 0.33
CDH1-204ENST00000562118 ZBTB38Q8NAP3 1195 aaPredicted RBP17.12■□□□□ 0.33
CDH1-204ENST00000562118 SMC4Q9NTJ3 1288 aa17.12■□□□□ 0.33
CDH1-204ENST00000562118 SH3TC1Q8TE82 1336 aa17.12■□□□□ 0.33
CDH1-204ENST00000562118 KIF16BQ96L93 1317 aa17.12■□□□□ 0.33
CDH1-204ENST00000562118 CDHR2Q9BYE9 1310 aa17.12■□□□□ 0.33
CDH1-204ENST00000562118 LRRC37AA6NMS7 1700 aa17.12■□□□□ 0.33
CDH1-204ENST00000562118 SLX4Q8IY92 1834 aa17.12■□□□□ 0.33
CDH1-204ENST00000562118 PCCAP05165 728 aaPredicted RBP17.11■□□□□ 0.33
CDH1-204ENST00000562118 CASP7P55210 303 aa17.11■□□□□ 0.33
CDH1-204ENST00000562118 BCL2L13Q9BXK5 485 aa17.11■□□□□ 0.33
CDH1-204ENST00000562118 CWC25Q9NXE8 425 aaPredicted RBP17.11■□□□□ 0.33
CDH1-204ENST00000562118 FER1L6Q2WGJ9 1857 aa17.1■□□□□ 0.33
CDH1-204ENST00000562118 A0A0G2JLW4 131 aa17.1■□□□□ 0.33
CDH1-204ENST00000562118 F6X3S4 739 aa17.1■□□□□ 0.33
CDH1-204ENST00000562118 HOXA10P31260 410 aaPredicted RBP17.1■□□□□ 0.33
CDH1-204ENST00000562118 NEXNQ0ZGT2 675 aa17.1■□□□□ 0.33
CDH1-204ENST00000562118 STYK1Q6J9G0 422 aa17.1■□□□□ 0.33
CDH1-204ENST00000562118 SNED1Q8TER0 1413 aa17.1■□□□□ 0.33
CDH1-204ENST00000562118 H7C1W4 665 aa17.09■□□□□ 0.33
CDH1-204ENST00000562118 ALDH1L1O75891 902 aa17.09■□□□□ 0.33
CDH1-204ENST00000562118 CHRNA5P30532 468 aa17.09■□□□□ 0.33
CDH1-204ENST00000562118 GCKRQ14397 625 aa17.09■□□□□ 0.33
CDH1-204ENST00000562118 CWF19L2Q2TBE0 894 aaKnown RBP17.09■□□□□ 0.33
CDH1-204ENST00000562118 SYNE4Q8N205 404 aa17.09■□□□□ 0.33
CDH1-204ENST00000562118 CCDC24Q8N4L8 307 aa17.09■□□□□ 0.33
CDH1-204ENST00000562118 TRMT112Q9UI30 125 aaKnown RBP17.09■□□□□ 0.33
CDH1-204ENST00000562118 UTYO14607 1347 aa17.09■□□□□ 0.33
CDH1-204ENST00000562118 ABCC4O15439 1325 aa17.09■□□□□ 0.33
CDH1-204ENST00000562118 COL4A1P02462 1669 aa17.08■□□□□ 0.32
CDH1-204ENST00000562118 C3orf67Q6ZVT6 689 aa17.08■□□□□ 0.32
CDH1-204ENST00000562118 C2CD5Q86YS7 1000 aa17.08■□□□□ 0.32
CDH1-204ENST00000562118 PLA2G12BQ9BX93 195 aa17.08■□□□□ 0.32
CDH1-204ENST00000562118 CHD4Q14839 1912 aa17.08■□□□□ 0.32
CDH1-204ENST00000562118 FAM177BA6PVY3 158 aa17.07■□□□□ 0.32
CDH1-204ENST00000562118 H0YIN7 160 aa17.07■□□□□ 0.32
CDH1-204ENST00000562118 BCAR3O75815 825 aa17.07■□□□□ 0.32
CDH1-204ENST00000562118 NPR1P16066 1061 aa17.07■□□□□ 0.32
CDH1-204ENST00000562118 YBX3P16989 372 aaKnown RBP eCLIP17.07■□□□□ 0.32
CDH1-204ENST00000562118 SF3B3Q15393 1217 aaKnown RBP17.07■□□□□ 0.32
CDH1-204ENST00000562118 KLHL34Q8N239 644 aa17.07■□□□□ 0.32
CDH1-204ENST00000562118 FAM89AQ96GI7 184 aa17.07■□□□□ 0.32
CDH1-204ENST00000562118 MASTLQ96GX5 879 aa17.07■□□□□ 0.32
CDH1-204ENST00000562118 PIM2Q9P1W9 311 aa17.07■□□□□ 0.32
CDH1-204ENST00000562118 NOB1Q9ULX3 412 aaKnown RBP17.07■□□□□ 0.32
CDH1-204ENST00000562118 TAF1P21675 1872 aa17.07■□□□□ 0.32
CDH1-204ENST00000562118 LTBP1Q14766 1721 aa17.07■□□□□ 0.32
CDH1-204ENST00000562118 RTL9Q8NET4 1388 aa17.06■□□□□ 0.32
CDH1-204ENST00000562118 API5Q9BZZ5 524 aaKnown RBP17.06■□□□□ 0.32
CDH1-204ENST00000562118 SBF1O95248 1867 aa17.05■□□□□ 0.32
CDH1-204ENST00000562118 C7orf43Q8WVR3 580 aa17.05■□□□□ 0.32
CDH1-204ENST00000562118 IRS4O14654 1257 aaPredicted RBP17.04■□□□□ 0.32
CDH1-204ENST00000562118 HCLS1P14317 486 aaPredicted RBP17.04■□□□□ 0.32
CDH1-204ENST00000562118 TRIM27P14373 513 aa17.04■□□□□ 0.32
CDH1-204ENST00000562118 GTF2E1P29083 439 aaPredicted RBP17.04■□□□□ 0.32
CDH1-204ENST00000562118 ATF7IPQ6VMQ6 1270 aa17.04■□□□□ 0.32
CDH1-204ENST00000562118 TTLL6Q8N841 843 aa17.04■□□□□ 0.32
CDH1-204ENST00000562118 CNKSR1Q969H4 720 aa17.04■□□□□ 0.32
CDH1-204ENST00000562118 NLRP3Q96P20 1036 aa17.04■□□□□ 0.32
CDH1-204ENST00000562118 CRAMP1Q96RY5 1269 aa17.04■□□□□ 0.32
CDH1-204ENST00000562118 SRCIN1Q9C0H9 1055 aa17.04■□□□□ 0.32
CDH1-204ENST00000562118 NPHP1O15259 732 aa17.03■□□□□ 0.32
CDH1-204ENST00000562118 HSP90B1P14625 803 aaKnown RBP17.03■□□□□ 0.32
CDH1-204ENST00000562118 DALRD3Q5D0E6 543 aaKnown RBP17.03■□□□□ 0.32
CDH1-204ENST00000562118 INTS3Q68E01 1043 aaKnown RBP17.03■□□□□ 0.32
CDH1-204ENST00000562118 A0A1B0GUL6 1792 aa17.02■□□□□ 0.32
CDH1-204ENST00000562118 GRM8O00222 908 aa17.02■□□□□ 0.32
CDH1-204ENST00000562118 IPO8O15397 1037 aaKnown RBP17.02■□□□□ 0.32
CDH1-204ENST00000562118 PDE8AO60658 829 aa17.02■□□□□ 0.32
CDH1-204ENST00000562118 DICER1Q9UPY3 1922 aaKnown RBP17.02■□□□□ 0.31
CDH1-204ENST00000562118 CSF1RP07333 972 aa17.01■□□□□ 0.31
CDH1-204ENST00000562118 ALDH1B1P30837 517 aa17.01■□□□□ 0.31
CDH1-204ENST00000562118 CCT4P50991 539 aaKnown RBP17.01■□□□□ 0.31
CDH1-204ENST00000562118 PRPF40BQ6NWY9 871 aaKnown RBP17.01■□□□□ 0.31
CDH1-204ENST00000562118 UBE3BQ7Z3V4 1068 aa17.01■□□□□ 0.31
CDH1-204ENST00000562118 GRIN3BO60391 1043 aa17■□□□□ 0.31
CDH1-204ENST00000562118 CTSWP56202 376 aa17■□□□□ 0.31
CDH1-204ENST00000562118 KAZALD1Q96I82 304 aa17■□□□□ 0.31
CDH1-204ENST00000562118 USP44Q9H0E7 712 aa17■□□□□ 0.31
CDH1-204ENST00000562118 RCAN3Q9UKA8 241 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms