RNA–Protein interactions for RNA: ENST00000561405.1

UBE2CP4-201, Transcript of ubiquitin conjugating enzyme E2 C pseudogene 4, humanhuman

BASIC

Gene UBE2CP4, Length 535 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2CP4-201ENST00000561405 DDX21Q9NR30 783 aaKnown RBP eCLIP9.66□□□□□ -0.86
UBE2CP4-201ENST00000561405 UBN2Q6ZU65 1347 aa9.65□□□□□ -0.86
UBE2CP4-201ENST00000561405 GNAI1P63096 354 aa9.65□□□□□ -0.86
UBE2CP4-201ENST00000561405 CCDC24Q8N4L8 307 aa9.65□□□□□ -0.86
UBE2CP4-201ENST00000561405 NGEFQ8N5V2 710 aa9.65□□□□□ -0.86
UBE2CP4-201ENST00000561405 LAS1LQ9Y4W2 734 aaKnown RBP9.65□□□□□ -0.86
UBE2CP4-201ENST00000561405 SLX4Q8IY92 1834 aa9.65□□□□□ -0.86
UBE2CP4-201ENST00000561405 FER1L6Q2WGJ9 1857 aa9.64□□□□□ -0.87
UBE2CP4-201ENST00000561405 ANXA1P04083 346 aa9.64□□□□□ -0.87
UBE2CP4-201ENST00000561405 CRY2Q49AN0 593 aa9.64□□□□□ -0.87
UBE2CP4-201ENST00000561405 IFFO2Q5TF58 517 aa9.64□□□□□ -0.87
UBE2CP4-201ENST00000561405 HDGFL1Q5TGJ6 251 aa9.64□□□□□ -0.87
UBE2CP4-201ENST00000561405 DUSP27Q5VZP5 1158 aa9.64□□□□□ -0.87
UBE2CP4-201ENST00000561405 WWC1Q8IX03 1113 aa9.64□□□□□ -0.87
UBE2CP4-201ENST00000561405 CNKSR1Q969H4 720 aa9.64□□□□□ -0.87
UBE2CP4-201ENST00000561405 FAM212AQ96EL1 285 aa9.64□□□□□ -0.87
UBE2CP4-201ENST00000561405 MASTLQ96GX5 879 aa9.64□□□□□ -0.87
UBE2CP4-201ENST00000561405 NYXQ9GZU5 481 aa9.64□□□□□ -0.87
UBE2CP4-201ENST00000561405 ZBTB3Q9H5J0 574 aa9.64□□□□□ -0.87
UBE2CP4-201ENST00000561405 ANKRD36CQ5JPF3 1778 aa9.63□□□□□ -0.87
UBE2CP4-201ENST00000561405 IL16Q14005 1332 aa9.63□□□□□ -0.87
UBE2CP4-201ENST00000561405 NTSR2O95665 410 aa9.63□□□□□ -0.87
UBE2CP4-201ENST00000561405 NPR1P16066 1061 aa9.63□□□□□ -0.87
UBE2CP4-201ENST00000561405 PARP10Q53GL7 1025 aa9.63□□□□□ -0.87
UBE2CP4-201ENST00000561405 DCAF8Q5TAQ9 597 aa9.63□□□□□ -0.87
UBE2CP4-201ENST00000561405 SUSD4Q5VX71 490 aa9.63□□□□□ -0.87
UBE2CP4-201ENST00000561405 C9orf131Q5VYM1 1079 aa9.63□□□□□ -0.87
UBE2CP4-201ENST00000561405 COPS6Q7L5N1 327 aa9.63□□□□□ -0.87
UBE2CP4-201ENST00000561405 ZNF579Q8NAF0 562 aaKnown RBP9.63□□□□□ -0.87
UBE2CP4-201ENST00000561405 XAGE3Q8WTP9 111 aa9.63□□□□□ -0.87
UBE2CP4-201ENST00000561405 C7orf43Q8WVR3 580 aa9.63□□□□□ -0.87
UBE2CP4-201ENST00000561405 ZNF622Q969S3 477 aaKnown RBP eCLIP9.63□□□□□ -0.87
UBE2CP4-201ENST00000561405 CHPF2Q9P2E5 772 aa9.63□□□□□ -0.87
UBE2CP4-201ENST00000561405 DBF4Q9UBU7 674 aaPredicted RBP9.63□□□□□ -0.87
UBE2CP4-201ENST00000561405 ABCC12Q96J65 1359 aa9.63□□□□□ -0.87
UBE2CP4-201ENST00000561405 RNF123Q5XPI4 1314 aa9.62□□□□□ -0.87
UBE2CP4-201ENST00000561405 LTBP3Q9NS15 1303 aa9.62□□□□□ -0.87
UBE2CP4-201ENST00000561405 ZC3H4Q9UPT8 1303 aaKnown RBP9.62□□□□□ -0.87
UBE2CP4-201ENST00000561405 CCDC88AQ3V6T2 1871 aa9.62□□□□□ -0.87
UBE2CP4-201ENST00000561405 TNRC6CQ9HCJ0 1690 aaKnown RBP9.62□□□□□ -0.87
UBE2CP4-201ENST00000561405 NFKBIEO00221 500 aa9.62□□□□□ -0.87
UBE2CP4-201ENST00000561405 NPHP1O15259 732 aa9.62□□□□□ -0.87
UBE2CP4-201ENST00000561405 PRELPP51888 382 aa9.62□□□□□ -0.87
UBE2CP4-201ENST00000561405 HSP90AB3PQ58FF7 597 aa9.62□□□□□ -0.87
UBE2CP4-201ENST00000561405 NECTIN2Q92692 538 aa9.62□□□□□ -0.87
UBE2CP4-201ENST00000561405 HYPKQ9NX55 129 aa9.62□□□□□ -0.87
UBE2CP4-201ENST00000561405 DICER1Q9UPY3 1922 aaKnown RBP9.62□□□□□ -0.87
UBE2CP4-201ENST00000561405 CACNA1SQ13698 1873 aa9.62□□□□□ -0.87
UBE2CP4-201ENST00000561405 LMNB1P20700 586 aa9.61□□□□□ -0.87
UBE2CP4-201ENST00000561405 GPTP24298 496 aa9.61□□□□□ -0.87
UBE2CP4-201ENST00000561405 HOXA10P31260 410 aaPredicted RBP9.61□□□□□ -0.87
UBE2CP4-201ENST00000561405 C1QTNF8P60827 252 aa9.61□□□□□ -0.87
UBE2CP4-201ENST00000561405 RASSF7Q02833 373 aa9.61□□□□□ -0.87
UBE2CP4-201ENST00000561405 TCIRG1Q13488 830 aa9.61□□□□□ -0.87
UBE2CP4-201ENST00000561405 ERFEQ4G0M1 354 aa9.61□□□□□ -0.87
UBE2CP4-201ENST00000561405 SLC10A5Q5PT55 438 aa9.61□□□□□ -0.87
UBE2CP4-201ENST00000561405 PRPF40BQ6NWY9 871 aaKnown RBP9.61□□□□□ -0.87
UBE2CP4-201ENST00000561405 PPP1R42Q7Z4L9 355 aa9.61□□□□□ -0.87
UBE2CP4-201ENST00000561405 NUTM1Q86Y26 1132 aa9.61□□□□□ -0.87
UBE2CP4-201ENST00000561405 C8orf58Q8NAV2 365 aa9.61□□□□□ -0.87
UBE2CP4-201ENST00000561405 PLBD2Q8NHP8 589 aa9.61□□□□□ -0.87
UBE2CP4-201ENST00000561405 PHF12Q96QT6 1004 aa9.61□□□□□ -0.87
UBE2CP4-201ENST00000561405 GPBP1L1Q9HC44 474 aaPredicted RBP9.61□□□□□ -0.87
UBE2CP4-201ENST00000561405 SNED1Q8TER0 1413 aa9.6□□□□□ -0.87
UBE2CP4-201ENST00000561405 FAM177BA6PVY3 158 aa9.6□□□□□ -0.87
UBE2CP4-201ENST00000561405 KIF3CO14782 793 aa9.6□□□□□ -0.87
UBE2CP4-201ENST00000561405 C21orf2O43822 256 aa9.6□□□□□ -0.87
UBE2CP4-201ENST00000561405 GTF2E1P29083 439 aaPredicted RBP9.6□□□□□ -0.87
UBE2CP4-201ENST00000561405 AIMP1Q12904 312 aaKnown RBP9.6□□□□□ -0.87
UBE2CP4-201ENST00000561405 GSE1Q14687 1217 aa9.6□□□□□ -0.87
UBE2CP4-201ENST00000561405 SOGA3Q5TF21 947 aa9.6□□□□□ -0.87
UBE2CP4-201ENST00000561405 ANKRD13DQ6ZTN6 518 aa9.6□□□□□ -0.87
UBE2CP4-201ENST00000561405 NLRP10Q86W26 655 aa9.6□□□□□ -0.87
UBE2CP4-201ENST00000561405 WDR63Q8IWG1 891 aa9.6□□□□□ -0.87
UBE2CP4-201ENST00000561405 UTP14AQ9BVJ6 771 aaKnown RBP9.6□□□□□ -0.87
UBE2CP4-201ENST00000561405 CHMP4AQ9BY43 222 aa9.6□□□□□ -0.87
UBE2CP4-201ENST00000561405 RNF181Q9P0P0 153 aa9.6□□□□□ -0.87
UBE2CP4-201ENST00000561405 CACNA1FO60840 1977 aa9.59□□□□□ -0.87
UBE2CP4-201ENST00000561405 ALDH1B1P30837 517 aa9.59□□□□□ -0.87
UBE2CP4-201ENST00000561405 TRIM28Q13263 835 aaKnown RBP9.59□□□□□ -0.87
UBE2CP4-201ENST00000561405 TSPYL6Q8N831 410 aa9.59□□□□□ -0.87
UBE2CP4-201ENST00000561405 ISCA1Q9BUE6 129 aa9.59□□□□□ -0.87
UBE2CP4-201ENST00000561405 CIZ1Q9ULV3 898 aaPredicted RBP9.59□□□□□ -0.87
UBE2CP4-201ENST00000561405 ELL2O00472 640 aaPredicted RBP9.58□□□□□ -0.88
UBE2CP4-201ENST00000561405 CCDC30Q5VVM6 783 aa9.58□□□□□ -0.88
UBE2CP4-201ENST00000561405 C3orf67Q6ZVT6 689 aa9.58□□□□□ -0.88
UBE2CP4-201ENST00000561405 TSR2Q969E8 191 aaKnown RBP9.58□□□□□ -0.88
UBE2CP4-201ENST00000561405 CRAMP1Q96RY5 1269 aa9.58□□□□□ -0.88
UBE2CP4-201ENST00000561405 TAOK3Q9H2K8 898 aa9.58□□□□□ -0.88
UBE2CP4-201ENST00000561405 LAMB2P55268 1798 aa9.58□□□□□ -0.88
UBE2CP4-201ENST00000561405 TIAM2Q8IVF5 1701 aa9.57□□□□□ -0.88
UBE2CP4-201ENST00000561405 CCDC93Q567U6 631 aa9.57□□□□□ -0.88
UBE2CP4-201ENST00000561405 CC2D2BQ6DHV5 1058 aa9.57□□□□□ -0.88
UBE2CP4-201ENST00000561405 ZNF526Q8TF50 670 aaPredicted RBP9.57□□□□□ -0.88
UBE2CP4-201ENST00000561405 NLRP3Q96P20 1036 aa9.57□□□□□ -0.88
UBE2CP4-201ENST00000561405 PHAXQ9H814 394 aaKnown RBP9.57□□□□□ -0.88
UBE2CP4-201ENST00000561405 SH3TC1Q8TE82 1336 aa9.56□□□□□ -0.88
UBE2CP4-201ENST00000561405 ZNF521Q96K83 1311 aa9.56□□□□□ -0.88
UBE2CP4-201ENST00000561405 FANCIQ9NVI1 1328 aa9.56□□□□□ -0.88
UBE2CP4-201ENST00000561405 SENP3-EIF4A1A0A087X0R7 540 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms