RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 ADAMTSL1Q8N6G6 1762 aa15.64■□□□□ 0.1
CARMIL3-204ENST00000561354 RPGRQ92834 1020 aaKnown RBP15.64■□□□□ 0.09
CARMIL3-204ENST00000561354 PNNQ9H307 717 aaKnown RBP15.64■□□□□ 0.09
CARMIL3-204ENST00000561354 PCNTO95613 3336 aa15.64■□□□□ 0.09
CARMIL3-204ENST00000561354 RNF123Q5XPI4 1314 aa15.64■□□□□ 0.09
CARMIL3-204ENST00000561354 MYL6BP14649 208 aa15.63■□□□□ 0.09
CARMIL3-204ENST00000561354 SUSD4Q5VX71 490 aa15.63■□□□□ 0.09
CARMIL3-204ENST00000561354 ZNF34Q8IZ26 560 aa15.63■□□□□ 0.09
CARMIL3-204ENST00000561354 CRAMP1Q96RY5 1269 aa15.63■□□□□ 0.09
CARMIL3-204ENST00000561354 CLEC11AQ9Y240 323 aa15.63■□□□□ 0.09
CARMIL3-204ENST00000561354 UBN2Q6ZU65 1347 aa15.63■□□□□ 0.09
CARMIL3-204ENST00000561354 GPTP24298 496 aa15.62■□□□□ 0.09
CARMIL3-204ENST00000561354 EIF6P56537 245 aaKnown RBP15.62■□□□□ 0.09
CARMIL3-204ENST00000561354 GIGYF2Q6Y7W6 1299 aaKnown RBP15.62■□□□□ 0.09
CARMIL3-204ENST00000561354 CNTROBQ8N137 903 aa15.62■□□□□ 0.09
CARMIL3-204ENST00000561354 THUMPD2Q9BTF0 503 aaKnown RBP15.62■□□□□ 0.09
CARMIL3-204ENST00000561354 ZBTB3Q9H5J0 574 aa15.62■□□□□ 0.09
CARMIL3-204ENST00000561354 ZEB1P37275 1124 aaPredicted RBP15.61■□□□□ 0.09
CARMIL3-204ENST00000561354 VEGFBP49765 207 aa15.61■□□□□ 0.09
CARMIL3-204ENST00000561354 RBM17Q96I25 401 aaKnown RBP15.61■□□□□ 0.09
CARMIL3-204ENST00000561354 PRDM10Q9NQV6 1147 aa15.61■□□□□ 0.09
CARMIL3-204ENST00000561354 MAPK8IP3Q9UPT6 1336 aa15.61■□□□□ 0.09
CARMIL3-204ENST00000561354 FOXN1O15353 648 aa15.6■□□□□ 0.09
CARMIL3-204ENST00000561354 NTSR2O95665 410 aa15.6■□□□□ 0.09
CARMIL3-204ENST00000561354 PARP10Q53GL7 1025 aa15.6■□□□□ 0.09
CARMIL3-204ENST00000561354 MAP1SQ66K74 1059 aaPredicted RBP15.6■□□□□ 0.09
CARMIL3-204ENST00000561354 PPP1R42Q7Z4L9 355 aa15.6■□□□□ 0.09
CARMIL3-204ENST00000561354 COL4A5P29400 1685 aa15.6■□□□□ 0.09
CARMIL3-204ENST00000561354 RASSF10A6NK89 507 aa15.59■□□□□ 0.09
CARMIL3-204ENST00000561354 PPEF1O14829 653 aaPredicted RBP15.59■□□□□ 0.09
CARMIL3-204ENST00000561354 SLC10A5Q5PT55 438 aa15.59■□□□□ 0.09
CARMIL3-204ENST00000561354 LRP10Q7Z4F1 713 aa15.59■□□□□ 0.09
CARMIL3-204ENST00000561354 BABAM1Q9NWV8 329 aa15.59■□□□□ 0.09
CARMIL3-204ENST00000561354 LMOD1P29536 600 aaPredicted RBP15.58■□□□□ 0.08
CARMIL3-204ENST00000561354 CTCFP49711 727 aaPredicted RBP15.58■□□□□ 0.08
CARMIL3-204ENST00000561354 PDIA6Q15084 440 aa15.58■□□□□ 0.08
CARMIL3-204ENST00000561354 DEFB115Q30KQ5 88 aa15.58■□□□□ 0.08
CARMIL3-204ENST00000561354 LARGE2Q8N3Y3 721 aa15.58■□□□□ 0.08
CARMIL3-204ENST00000561354 AIDAQ96BJ3 306 aa15.58■□□□□ 0.08
CARMIL3-204ENST00000561354 NLRP3Q96P20 1036 aa15.58■□□□□ 0.08
CARMIL3-204ENST00000561354 VPS33BQ9H267 617 aa15.58■□□□□ 0.08
CARMIL3-204ENST00000561354 WBP1LQ9NX94 342 aa15.58■□□□□ 0.08
CARMIL3-204ENST00000561354 TSPYL4Q9UJ04 414 aa15.58■□□□□ 0.08
CARMIL3-204ENST00000561354 GJA3Q9Y6H8 435 aa15.58■□□□□ 0.08
CARMIL3-204ENST00000561354 SCNN1DP51172 638 aa15.57■□□□□ 0.08
CARMIL3-204ENST00000561354 C3orf67Q6ZVT6 689 aa15.57■□□□□ 0.08
CARMIL3-204ENST00000561354 ATP6V0A2Q9Y487 856 aa15.57■□□□□ 0.08
CARMIL3-204ENST00000561354 USP50Q70EL3 339 aaPredicted RBP15.56■□□□□ 0.08
CARMIL3-204ENST00000561354 NIM1KQ8IY84 436 aa15.56■□□□□ 0.08
CARMIL3-204ENST00000561354 UTP14AQ9BVJ6 771 aaKnown RBP15.56■□□□□ 0.08
CARMIL3-204ENST00000561354 TMX4Q9H1E5 349 aaPredicted RBP15.56■□□□□ 0.08
CARMIL3-204ENST00000561354 DDX21Q9NR30 783 aaKnown RBP eCLIP15.56■□□□□ 0.08
CARMIL3-204ENST00000561354 LTBP1Q14766 1721 aa15.56■□□□□ 0.08
CARMIL3-204ENST00000561354 EIF2S2P20042 333 aaKnown RBP15.55■□□□□ 0.08
CARMIL3-204ENST00000561354 EPS15P42566 896 aa15.55■□□□□ 0.08
CARMIL3-204ENST00000561354 RIPK4P57078 832 aa15.55■□□□□ 0.08
CARMIL3-204ENST00000561354 WDR33Q9C0J8 1336 aaKnown RBP15.54■□□□□ 0.08
CARMIL3-204ENST00000561354 TCERG1O14776 1098 aaKnown RBP15.54■□□□□ 0.08
CARMIL3-204ENST00000561354 PPIP5K2O43314 1243 aa15.54■□□□□ 0.08
CARMIL3-204ENST00000561354 BBOX1O75936 387 aa15.54■□□□□ 0.08
CARMIL3-204ENST00000561354 HSP90AB3PQ58FF7 597 aa15.54■□□□□ 0.08
CARMIL3-204ENST00000561354 SLC51AQ86UW1 340 aa15.54■□□□□ 0.08
CARMIL3-204ENST00000561354 SUPT20HQ8NEM7 779 aa15.54■□□□□ 0.08
CARMIL3-204ENST00000561354 RTFDC1Q9BY42 306 aaPredicted RBP15.54■□□□□ 0.08
CARMIL3-204ENST00000561354 ABT1Q9ULW3 272 aaKnown RBP15.54■□□□□ 0.08
CARMIL3-204ENST00000561354 MAP2K1Q02750 393 aaPredicted RBP15.53■□□□□ 0.08
CARMIL3-204ENST00000561354 LMOD3Q0VAK6 560 aa15.53■□□□□ 0.08
CARMIL3-204ENST00000561354 PROSER3Q2NL68 480 aa15.53■□□□□ 0.08
CARMIL3-204ENST00000561354 SP8Q8IXZ3 490 aa15.53■□□□□ 0.08
CARMIL3-204ENST00000561354 ZNRF3Q9ULT6 936 aa15.53■□□□□ 0.08
CARMIL3-204ENST00000561354 ABCC4O15439 1325 aa15.52■□□□□ 0.08
CARMIL3-204ENST00000561354 TMPOP42166 694 aaKnown RBP15.52■□□□□ 0.08
CARMIL3-204ENST00000561354 LBX1P52954 281 aa15.52■□□□□ 0.08
CARMIL3-204ENST00000561354 RALBP1Q15311 655 aa15.52■□□□□ 0.08
CARMIL3-204ENST00000561354 AOC3Q16853 763 aa15.52■□□□□ 0.08
CARMIL3-204ENST00000561354 COPS6Q7L5N1 327 aa15.52■□□□□ 0.08
CARMIL3-204ENST00000561354 GPRC5DQ9NZD1 345 aa15.52■□□□□ 0.08
CARMIL3-204ENST00000561354 ANXA1P04083 346 aa15.51■□□□□ 0.07
CARMIL3-204ENST00000561354 CXCL9Q07325 125 aa15.51■□□□□ 0.07
CARMIL3-204ENST00000561354 TCIRG1Q13488 830 aa15.51■□□□□ 0.07
CARMIL3-204ENST00000561354 NLRP10Q86W26 655 aa15.51■□□□□ 0.07
CARMIL3-204ENST00000561354 ADARB2Q9NS39 739 aaKnown RBP15.51■□□□□ 0.07
CARMIL3-204ENST00000561354 HSPA8P11142 646 aaKnown RBP15.5■□□□□ 0.07
CARMIL3-204ENST00000561354 ECE1P42892 770 aa15.5■□□□□ 0.07
CARMIL3-204ENST00000561354 CST9Q5W186 159 aa15.5■□□□□ 0.07
CARMIL3-204ENST00000561354 DPP8Q6V1X1 898 aaPredicted RBP15.5■□□□□ 0.07
CARMIL3-204ENST00000561354 MPNDQ8N594 471 aa15.5■□□□□ 0.07
CARMIL3-204ENST00000561354 XAGE3Q8WTP9 111 aa15.5■□□□□ 0.07
CARMIL3-204ENST00000561354 ANKRD36CQ5JPF3 1778 aa15.49■□□□□ 0.07
CARMIL3-204ENST00000561354 SH3TC1Q8TE82 1336 aa15.49■□□□□ 0.07
CARMIL3-204ENST00000561354 CDHR2Q9BYE9 1310 aa15.49■□□□□ 0.07
CARMIL3-204ENST00000561354 CHL1O00533 1208 aa15.49■□□□□ 0.07
CARMIL3-204ENST00000561354 FMR1Q06787 632 aaKnown RBP eCLIP15.49■□□□□ 0.07
CARMIL3-204ENST00000561354 KIAA2012Q0VF49 1180 aa15.49■□□□□ 0.07
CARMIL3-204ENST00000561354 AIMP1Q12904 312 aaKnown RBP15.49■□□□□ 0.07
CARMIL3-204ENST00000561354 CAPNS2Q96L46 248 aa15.49■□□□□ 0.07
CARMIL3-204ENST00000561354 THSD7BQ9C0I4 1608 aa15.48■□□□□ 0.07
CARMIL3-204ENST00000561354 TRAF5O00463 557 aa15.48■□□□□ 0.07
CARMIL3-204ENST00000561354 HCLS1P14317 486 aaPredicted RBP15.48■□□□□ 0.07
CARMIL3-204ENST00000561354 GRAPQ13588 217 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms