RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 FRMPD1Q5SYB0 1578 aa9.19□□□□□ -0.94
LRRC28-220ENST00000561253 MYO5CQ9NQX4 1742 aa9.19□□□□□ -0.94
LRRC28-220ENST00000561253 SPATA31C2B4DYI2 1134 aa9.18□□□□□ -0.94
LRRC28-220ENST00000561253 EML1O00423 815 aa9.18□□□□□ -0.94
LRRC28-220ENST00000561253 ABCC1P33527 1531 aa9.18□□□□□ -0.94
LRRC28-220ENST00000561253 PLA2G4AP47712 749 aa9.18□□□□□ -0.94
LRRC28-220ENST00000561253 C4orf17Q53FE4 359 aa9.18□□□□□ -0.94
LRRC28-220ENST00000561253 EFCAB2Q5VUJ9 269 aa9.18□□□□□ -0.94
LRRC28-220ENST00000561253 SAMD9LQ8IVG5 1584 aa9.18□□□□□ -0.94
LRRC28-220ENST00000561253 ZNF295-AS1Q8N0V1 137 aa9.18□□□□□ -0.94
LRRC28-220ENST00000561253 ZDHHC1Q8WTX9 485 aa9.18□□□□□ -0.94
LRRC28-220ENST00000561253 ZNF644Q9H582 1327 aaPredicted RBP9.18□□□□□ -0.94
LRRC28-220ENST00000561253 ATP13A2Q9NQ11 1180 aa9.18□□□□□ -0.94
LRRC28-220ENST00000561253 MBD5Q9P267 1494 aa9.18□□□□□ -0.94
LRRC28-220ENST00000561253 KIAA1107Q9UPP5 1409 aa9.18□□□□□ -0.94
LRRC28-220ENST00000561253 ARHGAP5Q13017 1502 aa9.17□□□□□ -0.94
LRRC28-220ENST00000561253 POGZQ7Z3K3 1410 aa9.17□□□□□ -0.94
LRRC28-220ENST00000561253 MIA2Q96PC5 1412 aa9.17□□□□□ -0.94
LRRC28-220ENST00000561253 SOS2Q07890 1332 aaPredicted RBP9.17□□□□□ -0.94
LRRC28-220ENST00000561253 FIGNL2A6NMB9 653 aa9.17□□□□□ -0.94
LRRC28-220ENST00000561253 HIRAP54198 1017 aaPredicted RBP9.17□□□□□ -0.94
LRRC28-220ENST00000561253 POU4F2Q12837 409 aa9.17□□□□□ -0.94
LRRC28-220ENST00000561253 GTF3C2Q8WUA4 911 aaPredicted RBP9.17□□□□□ -0.94
LRRC28-220ENST00000561253 NGLY1Q96IV0 654 aa9.17□□□□□ -0.94
LRRC28-220ENST00000561253 ADGRL1O94910 1474 aa9.16□□□□□ -0.94
LRRC28-220ENST00000561253 FGD6Q6ZV73 1430 aa9.16□□□□□ -0.94
LRRC28-220ENST00000561253 SCAPERQ9BY12 1400 aa9.16□□□□□ -0.94
LRRC28-220ENST00000561253 TRAPPC8Q9Y2L5 1435 aa9.16□□□□□ -0.94
LRRC28-220ENST00000561253 PHKA2P46019 1235 aa9.16□□□□□ -0.94
LRRC28-220ENST00000561253 SH3PXD2AQ5TCZ1 1133 aa9.16□□□□□ -0.94
LRRC28-220ENST00000561253 NBPF10Q6P3W6 841 aaKnown RBP9.16□□□□□ -0.94
LRRC28-220ENST00000561253 POTEAQ6S8J7 498 aa9.16□□□□□ -0.94
LRRC28-220ENST00000561253 AIDAQ96BJ3 306 aa9.16□□□□□ -0.94
LRRC28-220ENST00000561253 CFDP1Q9UEE9 299 aaPredicted RBP9.16□□□□□ -0.94
LRRC28-220ENST00000561253 HCN4Q9Y3Q4 1203 aa9.16□□□□□ -0.94
LRRC28-220ENST00000561253 KDM6BO15054 1643 aa9.16□□□□□ -0.94
LRRC28-220ENST00000561253 CFAP74Q9C0B2 1584 aa9.16□□□□□ -0.94
LRRC28-220ENST00000561253 DENND4BO75064 1496 aaPredicted RBP9.15□□□□□ -0.94
LRRC28-220ENST00000561253 TCOF1Q13428 1488 aaKnown RBP9.15□□□□□ -0.94
LRRC28-220ENST00000561253 RAPGEF3O95398 923 aa9.15□□□□□ -0.94
LRRC28-220ENST00000561253 ZNF211Q13398 564 aaPredicted RBP9.15□□□□□ -0.94
LRRC28-220ENST00000561253 NBPF1Q3BBV0 1214 aa9.15□□□□□ -0.94
LRRC28-220ENST00000561253 TMCO4Q5TGY1 634 aa9.15□□□□□ -0.94
LRRC28-220ENST00000561253 C16orf46Q6P387 395 aa9.15□□□□□ -0.94
LRRC28-220ENST00000561253 ALDH16A1Q8IZ83 802 aa9.15□□□□□ -0.94
LRRC28-220ENST00000561253 KDM5CP41229 1560 aa9.15□□□□□ -0.95
LRRC28-220ENST00000561253 ZMYM4Q5VZL5 1548 aa9.15□□□□□ -0.95
LRRC28-220ENST00000561253 RICTORQ6R327 1708 aa9.14□□□□□ -0.95
LRRC28-220ENST00000561253 ITSN2Q9NZM3 1697 aa9.14□□□□□ -0.95
LRRC28-220ENST00000561253 WDR44Q5JSH3 913 aa9.14□□□□□ -0.95
LRRC28-220ENST00000561253 SND1Q7KZF4 910 aaKnown RBP eCLIP9.14□□□□□ -0.95
LRRC28-220ENST00000561253 ANO2Q9NQ90 1003 aa9.14□□□□□ -0.95
LRRC28-220ENST00000561253 EGFL7Q9UHF1 273 aa9.14□□□□□ -0.95
LRRC28-220ENST00000561253 DNMT3AQ9Y6K1 912 aaPredicted RBP9.14□□□□□ -0.95
LRRC28-220ENST00000561253 SYCP2Q9BX26 1530 aa9.14□□□□□ -0.95
LRRC28-220ENST00000561253 CAMSAP2Q08AD1 1489 aa9.14□□□□□ -0.95
LRRC28-220ENST00000561253 PLEKHH2Q8IVE3 1493 aa9.14□□□□□ -0.95
LRRC28-220ENST00000561253 SOWAHDA6NJG2 315 aa9.13□□□□□ -0.95
LRRC28-220ENST00000561253 H3BRB1 525 aa9.13□□□□□ -0.95
LRRC28-220ENST00000561253 MAN1A2O60476 641 aa9.13□□□□□ -0.95
LRRC28-220ENST00000561253 RHOQP17081 205 aa9.13□□□□□ -0.95
LRRC28-220ENST00000561253 GLYCTKQ8IVS8 523 aa9.13□□□□□ -0.95
LRRC28-220ENST00000561253 AFAP1Q8N556 730 aa9.13□□□□□ -0.95
LRRC28-220ENST00000561253 HELQQ8TDG4 1101 aa9.13□□□□□ -0.95
LRRC28-220ENST00000561253 PHACTR1Q9C0D0 580 aa9.13□□□□□ -0.95
LRRC28-220ENST00000561253 TUT1Q9H6E5 874 aaKnown RBP9.13□□□□□ -0.95
LRRC28-220ENST00000561253 QTRT2Q9H974 415 aaKnown RBP9.13□□□□□ -0.95
LRRC28-220ENST00000561253 TIMMDC1Q9NPL8 285 aa9.13□□□□□ -0.95
LRRC28-220ENST00000561253 DACH1Q9UI36 760 aa9.13□□□□□ -0.95
LRRC28-220ENST00000561253 ZNF518AQ6AHZ1 1483 aa9.13□□□□□ -0.95
LRRC28-220ENST00000561253 TATP17735 454 aaPredicted RBP9.12□□□□□ -0.95
LRRC28-220ENST00000561253 TXLNAP40222 546 aa9.12□□□□□ -0.95
LRRC28-220ENST00000561253 FKBP4Q02790 459 aaKnown RBP eCLIP9.12□□□□□ -0.95
LRRC28-220ENST00000561253 SF3B2Q13435 895 aaKnown RBP9.12□□□□□ -0.95
LRRC28-220ENST00000561253 RTN1Q16799 776 aa9.12□□□□□ -0.95
LRRC28-220ENST00000561253 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.12□□□□□ -0.95
LRRC28-220ENST00000561253 SAP130Q9H0E3 1048 aa9.12□□□□□ -0.95
LRRC28-220ENST00000561253 BIN2Q9UBW5 565 aaPredicted RBP9.12□□□□□ -0.95
LRRC28-220ENST00000561253 DNMT3LQ9UJW3 386 aa9.12□□□□□ -0.95
LRRC28-220ENST00000561253 RRBP1Q9P2E9 1410 aaKnown RBP9.12□□□□□ -0.95
LRRC28-220ENST00000561253 MLH3Q9UHC1 1453 aa9.11□□□□□ -0.95
LRRC28-220ENST00000561253 ICMTO60725 284 aa9.11□□□□□ -0.95
LRRC28-220ENST00000561253 HNRNPMP52272 730 aaKnown RBP eCLIP9.11□□□□□ -0.95
LRRC28-220ENST00000561253 MTMR3Q13615 1198 aa9.11□□□□□ -0.95
LRRC28-220ENST00000561253 COX20Q5RI15 118 aa9.11□□□□□ -0.95
LRRC28-220ENST00000561253 C1orf53Q5VUE5 145 aa9.11□□□□□ -0.95
LRRC28-220ENST00000561253 MYO19Q96H55 970 aa9.11□□□□□ -0.95
LRRC28-220ENST00000561253 SENP2Q9HC62 589 aa9.11□□□□□ -0.95
LRRC28-220ENST00000561253 ZDHHC3Q9NYG2 299 aa9.11□□□□□ -0.95
LRRC28-220ENST00000561253 CCDC9Q9Y3X0 531 aaKnown RBP9.11□□□□□ -0.95
LRRC28-220ENST00000561253 ARHGEF5Q12774 1597 aa9.11□□□□□ -0.95
LRRC28-220ENST00000561253 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.11□□□□□ -0.95
LRRC28-220ENST00000561253 MAGI2Q86UL8 1455 aa9.1□□□□□ -0.95
LRRC28-220ENST00000561253 A0A1B0GTH6 734 aa9.1□□□□□ -0.95
LRRC28-220ENST00000561253 Q6ZNB5 142 aa9.1□□□□□ -0.95
LRRC28-220ENST00000561253 RHPN1Q8TCX5 695 aa9.1□□□□□ -0.95
LRRC28-220ENST00000561253 ABCC5O15440 1437 aa9.1□□□□□ -0.95
LRRC28-220ENST00000561253 YEATS2Q9ULM3 1422 aa9.1□□□□□ -0.95
LRRC28-220ENST00000561253 PTPN23Q9H3S7 1636 aa9.09□□□□□ -0.95
LRRC28-220ENST00000561253 CCDC141Q6ZP82 1450 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms