RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 PCNTO95613 3336 aa35.46■■■■□ 3.27
SNRPA1-215ENST00000561187 AIMP1Q12904 312 aaKnown RBP35.45■■■■□ 3.27
SNRPA1-215ENST00000561187 SYNE4Q8N205 404 aa35.45■■■■□ 3.27
SNRPA1-215ENST00000561187 IARSP41252 1262 aaKnown RBP35.43■■■■□ 3.26
SNRPA1-215ENST00000561187 ZNF428Q96B54 188 aa35.42■■■■□ 3.26
SNRPA1-215ENST00000561187 CHADLQ6NUI6 762 aa35.41■■■■□ 3.26
SNRPA1-215ENST00000561187 RIC1Q4ADV7 1423 aa35.4■■■■□ 3.26
SNRPA1-215ENST00000561187 SNED1Q8TER0 1413 aa35.4■■■■□ 3.26
SNRPA1-215ENST00000561187 PPP1R42Q7Z4L9 355 aa35.4■■■■□ 3.26
SNRPA1-215ENST00000561187 XAGE3Q8WTP9 111 aa35.4■■■■□ 3.26
SNRPA1-215ENST00000561187 RUNDC1Q96C34 613 aa35.4■■■■□ 3.26
SNRPA1-215ENST00000561187 COPS6Q7L5N1 327 aa35.39■■■■□ 3.26
SNRPA1-215ENST00000561187 JMYQ8N9B5 988 aa35.39■■■■□ 3.26
SNRPA1-215ENST00000561187 BABAM1Q9NWV8 329 aa35.39■■■■□ 3.26
SNRPA1-215ENST00000561187 ADAMTS8Q9UP79 889 aa35.39■■■■□ 3.26
SNRPA1-215ENST00000561187 TRIM35Q9UPQ4 493 aa35.39■■■■□ 3.26
SNRPA1-215ENST00000561187 IQCA1LA6NCM1 817 aa35.38■■■■□ 3.25
SNRPA1-215ENST00000561187 PPEF1O14829 653 aaPredicted RBP35.38■■■■□ 3.25
SNRPA1-215ENST00000561187 PARP10Q53GL7 1025 aa35.38■■■■□ 3.25
SNRPA1-215ENST00000561187 EAPPQ56P03 285 aaPredicted RBP35.38■■■■□ 3.25
SNRPA1-215ENST00000561187 RBM17Q96I25 401 aaKnown RBP35.38■■■■□ 3.25
SNRPA1-215ENST00000561187 COL4A5P29400 1685 aa35.37■■■■□ 3.25
SNRPA1-215ENST00000561187 L3MBTL3Q96JM7 780 aaPredicted RBP35.37■■■■□ 3.25
SNRPA1-215ENST00000561187 UTP14AQ9BVJ6 771 aaKnown RBP35.37■■■■□ 3.25
SNRPA1-215ENST00000561187 TAF1DQ9H5J8 278 aaPredicted RBP35.37■■■■□ 3.25
SNRPA1-215ENST00000561187 RNF123Q5XPI4 1314 aa35.36■■■■□ 3.25
SNRPA1-215ENST00000561187 ANKRD36CQ5JPF3 1778 aa35.36■■■■□ 3.25
SNRPA1-215ENST00000561187 HOXA10P31260 410 aaPredicted RBP35.36■■■■□ 3.25
SNRPA1-215ENST00000561187 SCN4AP35499 1836 aa35.36■■■■□ 3.25
SNRPA1-215ENST00000561187 PSMD1Q99460 953 aa35.35■■■■□ 3.25
SNRPA1-215ENST00000561187 CHL1O00533 1208 aa35.34■■■■□ 3.25
SNRPA1-215ENST00000561187 CHPF2Q9P2E5 772 aa35.34■■■■□ 3.25
SNRPA1-215ENST00000561187 JDP2Q8WYK2 163 aa35.33■■■■□ 3.25
SNRPA1-215ENST00000561187 NLRP3Q96P20 1036 aa35.33■■■■□ 3.25
SNRPA1-215ENST00000561187 CRAMP1Q96RY5 1269 aa35.32■■■■□ 3.24
SNRPA1-215ENST00000561187 HACL1Q9UJ83 578 aa35.32■■■■□ 3.24
SNRPA1-215ENST00000561187 FZD9O00144 591 aa35.31■■■■□ 3.24
SNRPA1-215ENST00000561187 LDHDQ86WU2 507 aa35.31■■■■□ 3.24
SNRPA1-215ENST00000561187 GJA3Q9Y6H8 435 aa35.31■■■■□ 3.24
SNRPA1-215ENST00000561187 HCLS1P14317 486 aaPredicted RBP35.3■■■■□ 3.24
SNRPA1-215ENST00000561187 HDGFL1Q5TGJ6 251 aa35.3■■■■□ 3.24
SNRPA1-215ENST00000561187 CC2D2BQ6DHV5 1058 aa35.3■■■■□ 3.24
SNRPA1-215ENST00000561187 PRKRIP1Q9H875 184 aaPredicted RBP35.3■■■■□ 3.24
SNRPA1-215ENST00000561187 DDX21Q9NR30 783 aaKnown RBP eCLIP35.3■■■■□ 3.24
SNRPA1-215ENST00000561187 CLEC11AQ9Y240 323 aa35.3■■■■□ 3.24
SNRPA1-215ENST00000561187 LAMB2P55268 1798 aa35.29■■■■□ 3.24
SNRPA1-215ENST00000561187 NLRP10Q86W26 655 aa35.29■■■■□ 3.24
SNRPA1-215ENST00000561187 LARGE2Q8N3Y3 721 aa35.29■■■■□ 3.24
SNRPA1-215ENST00000561187 MKRN1Q9UHC7 482 aaKnown RBP35.29■■■■□ 3.24
SNRPA1-215ENST00000561187 ABCC4O15439 1325 aa35.29■■■■□ 3.24
SNRPA1-215ENST00000561187 EPHX2P34913 555 aa35.28■■■■□ 3.24
SNRPA1-215ENST00000561187 HSP90AB3PQ58FF7 597 aa35.28■■■■□ 3.24
SNRPA1-215ENST00000561187 EIF6P56537 245 aaKnown RBP35.26■■■■□ 3.24
SNRPA1-215ENST00000561187 TRMT112Q9UI30 125 aaKnown RBP35.26■■■■□ 3.24
SNRPA1-215ENST00000561187 TCIRG1Q13488 830 aa35.25■■■■□ 3.23
SNRPA1-215ENST00000561187 GPC2Q8N158 579 aa35.25■■■■□ 3.23
SNRPA1-215ENST00000561187 CREBZFQ9NS37 354 aa35.25■■■■□ 3.23
SNRPA1-215ENST00000561187 PPIP5K2O43314 1243 aa35.23■■■■□ 3.23
SNRPA1-215ENST00000561187 HSPA1AP0DMV8 641 aaKnown RBP35.23■■■■□ 3.23
SNRPA1-215ENST00000561187 HSPA1BP0DMV9 641 aaKnown RBP35.23■■■■□ 3.23
SNRPA1-215ENST00000561187 AOC3Q16853 763 aa35.23■■■■□ 3.23
SNRPA1-215ENST00000561187 SLC10A5Q5PT55 438 aa35.23■■■■□ 3.23
SNRPA1-215ENST00000561187 COL13A1Q5TAT6 717 aaPredicted RBP35.23■■■■□ 3.23
SNRPA1-215ENST00000561187 TMX4Q9H1E5 349 aaPredicted RBP35.22■■■■□ 3.23
SNRPA1-215ENST00000561187 MBIPQ9NS73 344 aa35.22■■■■□ 3.23
SNRPA1-215ENST00000561187 ATP6V0A2Q9Y487 856 aa35.22■■■■□ 3.23
SNRPA1-215ENST00000561187 PASKQ96RG2 1323 aa35.22■■■■□ 3.23
SNRPA1-215ENST00000561187 LTBP1Q14766 1721 aa35.21■■■■□ 3.23
SNRPA1-215ENST00000561187 ADAMTSL1Q8N6G6 1762 aa35.21■■■■□ 3.23
SNRPA1-215ENST00000561187 DUSP27Q5VZP5 1158 aa35.21■■■■□ 3.23
SNRPA1-215ENST00000561187 MAP1SQ66K74 1059 aaPredicted RBP35.21■■■■□ 3.23
SNRPA1-215ENST00000561187 NIM1KQ8IY84 436 aa35.21■■■■□ 3.23
SNRPA1-215ENST00000561187 SH3TC1Q8TE82 1336 aa35.21■■■■□ 3.23
SNRPA1-215ENST00000561187 APAF1O14727 1248 aa35.2■■■■□ 3.23
SNRPA1-215ENST00000561187 CFAP44Q96MT7 982 aa35.2■■■■□ 3.23
SNRPA1-215ENST00000561187 TAF1P21675 1872 aa35.2■■■■□ 3.22
SNRPA1-215ENST00000561187 ATP5J2-PTCD1G3V325 749 aa35.19■■■■□ 3.22
SNRPA1-215ENST00000561187 LMOD1P29536 600 aaPredicted RBP35.17■■■■□ 3.22
SNRPA1-215ENST00000561187 GRIPAP1Q4V328 841 aa35.17■■■■□ 3.22
SNRPA1-215ENST00000561187 RTL5Q5HYW3 569 aaPredicted RBP35.17■■■■□ 3.22
SNRPA1-215ENST00000561187 PLBD2Q8NHP8 589 aa35.17■■■■□ 3.22
SNRPA1-215ENST00000561187 DBF4Q9UBU7 674 aaPredicted RBP35.17■■■■□ 3.22
SNRPA1-215ENST00000561187 ITGBL1O95965 494 aaPredicted RBP35.16■■■■□ 3.22
SNRPA1-215ENST00000561187 HOXB7P09629 217 aa35.16■■■■□ 3.22
SNRPA1-215ENST00000561187 DDX46Q7L014 1031 aaKnown RBP35.16■■■■□ 3.22
SNRPA1-215ENST00000561187 PNMA8AQ86V59 439 aaPredicted RBP35.16■■■■□ 3.22
SNRPA1-215ENST00000561187 DDX60Q8IY21 1712 aaKnown RBP35.15■■■■□ 3.22
SNRPA1-215ENST00000561187 ELL2O00472 640 aaPredicted RBP35.15■■■■□ 3.22
SNRPA1-215ENST00000561187 SCNN1DP51172 638 aa35.15■■■■□ 3.22
SNRPA1-215ENST00000561187 DPP8Q6V1X1 898 aaPredicted RBP35.15■■■■□ 3.22
SNRPA1-215ENST00000561187 ANKRD13DQ6ZTN6 518 aa35.15■■■■□ 3.22
SNRPA1-215ENST00000561187 EPS15P42566 896 aa35.14■■■■□ 3.22
SNRPA1-215ENST00000561187 GRAPQ13588 217 aa35.13■■■■□ 3.21
SNRPA1-215ENST00000561187 CNTROBQ8N137 903 aa35.13■■■■□ 3.21
SNRPA1-215ENST00000561187 GRAPLQ8TC17 118 aaPredicted RBP35.13■■■■□ 3.21
SNRPA1-215ENST00000561187 FAM89AQ96GI7 184 aa35.13■■■■□ 3.21
SNRPA1-215ENST00000561187 CNTNAP1P78357 1384 aa35.13■■■■□ 3.21
SNRPA1-215ENST00000561187 TMEM88BA6NKF7 163 aa35.11■■■■□ 3.21
SNRPA1-215ENST00000561187 MPNDQ8N594 471 aa35.11■■■■□ 3.21
SNRPA1-215ENST00000561187 ISCA1Q9BUE6 129 aa35.11■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms