RNA–Protein interactions for RNA: ENST00000560881.5

RPL28-211, Transcript of ribosomal protein L28, humanhuman

TSL 5

Gene RPL28, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-211ENST00000560881 METTL22Q9BUU2 404 aaPredicted RBP21.29■■□□□ 1
RPL28-211ENST00000560881 CACNA1SQ13698 1873 aa21.28■■□□□ 1
RPL28-211ENST00000560881 CT47B1P0C2W7 299 aaPredicted RBP21.28■■□□□ 1
RPL28-211ENST00000560881 GTF2E1P29083 439 aaPredicted RBP21.28■■□□□ 1
RPL28-211ENST00000560881 IBTKQ9P2D0 1353 aaPredicted RBP21.28■■□□□ 1
RPL28-211ENST00000560881 RARSP54136 660 aaKnown RBP21.28■■□□□ 1
RPL28-211ENST00000560881 ALDH1L2Q3SY69 923 aa21.28■■□□□ 1
RPL28-211ENST00000560881 PPP1R42Q7Z4L9 355 aa21.28■■□□□ 1
RPL28-211ENST00000560881 UTP14AQ9BVJ6 771 aaKnown RBP21.28■■□□□ 1
RPL28-211ENST00000560881 NYXQ9GZU5 481 aa21.28■■□□□ 1
RPL28-211ENST00000560881 IGKV5-2P06315 115 aa21.27■■□□□ 1
RPL28-211ENST00000560881 KCNA3P22001 575 aa21.27■■□□□ 1
RPL28-211ENST00000560881 TGFB2P61812 414 aa21.27■■□□□ 1
RPL28-211ENST00000560881 CWF19L2Q2TBE0 894 aaKnown RBP21.27■■□□□ 1
RPL28-211ENST00000560881 RTL5Q5HYW3 569 aaPredicted RBP21.27■■□□□ 1
RPL28-211ENST00000560881 DNAAF4Q8WXU2 420 aa21.27■■□□□ 1
RPL28-211ENST00000560881 BRIP1Q9BX63 1249 aa21.27■■□□□ 1
RPL28-211ENST00000560881 DDX60Q8IY21 1712 aaKnown RBP21.27■■□□□ 1
RPL28-211ENST00000560881 LAMB2P55268 1798 aa21.26■□□□□ 0.99
RPL28-211ENST00000560881 TRMT112Q9UI30 125 aaKnown RBP21.26■□□□□ 0.99
RPL28-211ENST00000560881 CENPBP07199 599 aaPredicted RBP21.25■□□□□ 0.99
RPL28-211ENST00000560881 C2CD5Q86YS7 1000 aa21.24■□□□□ 0.99
RPL28-211ENST00000560881 JARID2Q92833 1246 aaPredicted RBP21.24■□□□□ 0.99
RPL28-211ENST00000560881 BCAR3O75815 825 aa21.24■□□□□ 0.99
RPL28-211ENST00000560881 C3orf67Q6ZVT6 689 aa21.24■□□□□ 0.99
RPL28-211ENST00000560881 FAM89AQ96GI7 184 aa21.24■□□□□ 0.99
RPL28-211ENST00000560881 YBX3P16989 372 aaKnown RBP eCLIP21.23■□□□□ 0.997e-8■□□□□ 8.2
RPL28-211ENST00000560881 NEXNQ0ZGT2 675 aa21.23■□□□□ 0.99
RPL28-211ENST00000560881 TRIM28Q13263 835 aaKnown RBP21.23■□□□□ 0.99
RPL28-211ENST00000560881 NEURL1BA8MQ27 555 aa21.22■□□□□ 0.99
RPL28-211ENST00000560881 HCLS1P14317 486 aaPredicted RBP21.22■□□□□ 0.99
RPL28-211ENST00000560881 PDE6BP35913 854 aa21.22■□□□□ 0.99
RPL28-211ENST00000560881 SLC4A10Q6U841 1118 aa21.22■□□□□ 0.99
RPL28-211ENST00000560881 CCDC191Q8NCU4 936 aa21.22■□□□□ 0.99
RPL28-211ENST00000560881 CWC25Q9NXE8 425 aaPredicted RBP21.22■□□□□ 0.99
RPL28-211ENST00000560881 NOB1Q9ULX3 412 aaKnown RBP21.22■□□□□ 0.99
RPL28-211ENST00000560881 SH3TC1Q8TE82 1336 aa21.22■□□□□ 0.99
RPL28-211ENST00000560881 H0YIN7 160 aa21.21■□□□□ 0.99
RPL28-211ENST00000560881 PTPRCP08575 1304 aa21.21■□□□□ 0.99
RPL28-211ENST00000560881 RIC1Q4ADV7 1423 aa21.2■□□□□ 0.98
RPL28-211ENST00000560881 SRGNP10124 158 aa21.2■□□□□ 0.98
RPL28-211ENST00000560881 GPR162Q16538 588 aa21.2■□□□□ 0.98
RPL28-211ENST00000560881 BEND3Q5T5X7 828 aa21.2■□□□□ 0.98
RPL28-211ENST00000560881 ZNF622Q969S3 477 aaKnown RBP eCLIP21.2■□□□□ 0.98
RPL28-211ENST00000560881 ZBTB38Q8NAP3 1195 aaPredicted RBP21.19■□□□□ 0.98
RPL28-211ENST00000560881 LINS1Q8NG48 757 aa21.19■□□□□ 0.98
RPL28-211ENST00000560881 BCS1LQ9Y276 419 aa21.19■□□□□ 0.98
RPL28-211ENST00000560881 TAF1P21675 1872 aa21.19■□□□□ 0.98
RPL28-211ENST00000560881 RNF123Q5XPI4 1314 aa21.19■□□□□ 0.98
RPL28-211ENST00000560881 SLX4Q8IY92 1834 aa21.19■□□□□ 0.98
RPL28-211ENST00000560881 ARFGEF1Q9Y6D6 1849 aa21.19■□□□□ 0.98
RPL28-211ENST00000560881 PIM2Q9P1W9 311 aa21.18■□□□□ 0.98
RPL28-211ENST00000560881 KLRG2A4D1S0 409 aaPredicted RBP21.18■□□□□ 0.98
RPL28-211ENST00000560881 BRPF1P55201 1214 aaPredicted RBP21.18■□□□□ 0.98
RPL28-211ENST00000560881 TNNQ9UQP3 1299 aa21.18■□□□□ 0.98
RPL28-211ENST00000560881 PCCAP05165 728 aaPredicted RBP21.17■□□□□ 0.98
RPL28-211ENST00000560881 GCKRQ14397 625 aa21.17■□□□□ 0.98
RPL28-211ENST00000560881 SLC10A5Q5PT55 438 aa21.17■□□□□ 0.98
RPL28-211ENST00000560881 FRAT1Q92837 279 aaPredicted RBP21.17■□□□□ 0.98
RPL28-211ENST00000560881 IRS4O14654 1257 aaPredicted RBP21.16■□□□□ 0.98
RPL28-211ENST00000560881 CRY2Q49AN0 593 aa21.16■□□□□ 0.98
RPL28-211ENST00000560881 MASTLQ96GX5 879 aa21.16■□□□□ 0.98
RPL28-211ENST00000560881 KIF16BQ96L93 1317 aa21.16■□□□□ 0.98
RPL28-211ENST00000560881 MYH3P11055 1940 aa21.16■□□□□ 0.98
RPL28-211ENST00000560881 UBE3BQ7Z3V4 1068 aa21.15■□□□□ 0.98
RPL28-211ENST00000560881 NLRP3Q96P20 1036 aa21.15■□□□□ 0.98
RPL28-211ENST00000560881 COL4A1P02462 1669 aa21.15■□□□□ 0.98
RPL28-211ENST00000560881 DALRD3Q5D0E6 543 aaKnown RBP21.15■□□□□ 0.98
RPL28-211ENST00000560881 NPR1P16066 1061 aa21.14■□□□□ 0.97
RPL28-211ENST00000560881 STYK1Q6J9G0 422 aa21.14■□□□□ 0.97
RPL28-211ENST00000560881 SLC51AQ86UW1 340 aa21.14■□□□□ 0.97
RPL28-211ENST00000560881 TTLL6Q8N841 843 aa21.14■□□□□ 0.97
RPL28-211ENST00000560881 SRCIN1Q9C0H9 1055 aa21.14■□□□□ 0.97
RPL28-211ENST00000560881 ZNF219Q9P2Y4 722 aaPredicted RBP21.14■□□□□ 0.97
RPL28-211ENST00000560881 PDZRN3Q9UPQ7 1066 aa21.14■□□□□ 0.97
RPL28-211ENST00000560881 RPGRQ92834 1020 aaKnown RBP21.13■□□□□ 0.97
RPL28-211ENST00000560881 H7C1W4 665 aa21.12■□□□□ 0.97
RPL28-211ENST00000560881 CASP7P55210 303 aa21.12■□□□□ 0.97
RPL28-211ENST00000560881 PRPF40BQ6NWY9 871 aaKnown RBP21.12■□□□□ 0.97
RPL28-211ENST00000560881 TRIM27P14373 513 aa21.12■□□□□ 0.97
RPL28-211ENST00000560881 CCDC85AQ96PX6 553 aaPredicted RBP21.12■□□□□ 0.97
RPL28-211ENST00000560881 CDHR2Q9BYE9 1310 aa21.11■□□□□ 0.97
RPL28-211ENST00000560881 DCAF8L1A6NGE4 600 aa21.11■□□□□ 0.97
RPL28-211ENST00000560881 CLUAP1Q96AJ1 413 aa21.11■□□□□ 0.97
RPL28-211ENST00000560881 API5Q9BZZ5 524 aaKnown RBP21.11■□□□□ 0.97
RPL28-211ENST00000560881 ALDH1L1O75891 902 aa21.1■□□□□ 0.97
RPL28-211ENST00000560881 CNKSR1Q969H4 720 aa21.1■□□□□ 0.97
RPL28-211ENST00000560881 RCAN3Q9UKA8 241 aa21.1■□□□□ 0.97
RPL28-211ENST00000560881 ABCC4O15439 1325 aa21.1■□□□□ 0.97
RPL28-211ENST00000560881 GRM8O00222 908 aa21.09■□□□□ 0.97
RPL28-211ENST00000560881 C21orf2O43822 256 aa21.09■□□□□ 0.97
RPL28-211ENST00000560881 PDE8AO60658 829 aa21.09■□□□□ 0.97
RPL28-211ENST00000560881 OLFM4Q6UX06 510 aa21.09■□□□□ 0.97
RPL28-211ENST00000560881 ATF7IPQ6VMQ6 1270 aa21.09■□□□□ 0.97
RPL28-211ENST00000560881 ARHGAP45Q92619 1136 aa21.09■□□□□ 0.97
RPL28-211ENST00000560881 HOXA10P31260 410 aaPredicted RBP21.09■□□□□ 0.97
RPL28-211ENST00000560881 RBM17Q96I25 401 aaKnown RBP21.09■□□□□ 0.97
RPL28-211ENST00000560881 SPEF2Q9C093 1822 aa21.08■□□□□ 0.97
RPL28-211ENST00000560881 NBPF7P0C2Y1 421 aaPredicted RBP21.08■□□□□ 0.96
RPL28-211ENST00000560881 CTSWP56202 376 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms