RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 STYK1Q6J9G0 422 aa19.64■□□□□ 0.73
SNRPA1-213ENST00000560856 UTP14AQ9BVJ6 771 aaKnown RBP19.64■□□□□ 0.73
SNRPA1-213ENST00000560856 RIC1Q4ADV7 1423 aa19.64■□□□□ 0.73
SNRPA1-213ENST00000560856 ARFGEF1Q9Y6D6 1849 aa19.64■□□□□ 0.73
SNRPA1-213ENST00000560856 ATP5J2-PTCD1G3V325 749 aa19.63■□□□□ 0.73
SNRPA1-213ENST00000560856 GTF2E1P29083 439 aaPredicted RBP19.63■□□□□ 0.73
SNRPA1-213ENST00000560856 CRY2Q49AN0 593 aa19.63■□□□□ 0.73
SNRPA1-213ENST00000560856 RIC3Q7Z5B4 369 aa19.63■□□□□ 0.73
SNRPA1-213ENST00000560856 SYNE4Q8N205 404 aa19.63■□□□□ 0.73
SNRPA1-213ENST00000560856 ZNF622Q969S3 477 aaKnown RBP eCLIP19.63■□□□□ 0.73
SNRPA1-213ENST00000560856 MASTLQ96GX5 879 aa19.63■□□□□ 0.73
SNRPA1-213ENST00000560856 C3orf67Q6ZVT6 689 aa19.62■□□□□ 0.73
SNRPA1-213ENST00000560856 ARFGEF2Q9Y6D5 1785 aa19.62■□□□□ 0.73
SNRPA1-213ENST00000560856 TNRC6CQ9HCJ0 1690 aaKnown RBP19.62■□□□□ 0.73
SNRPA1-213ENST00000560856 ADCY9O60503 1353 aa19.61■□□□□ 0.73
SNRPA1-213ENST00000560856 RNF123Q5XPI4 1314 aa19.61■□□□□ 0.73
SNRPA1-213ENST00000560856 NPR1P16066 1061 aa19.61■□□□□ 0.73
SNRPA1-213ENST00000560856 KSR2Q6VAB6 950 aa19.61■□□□□ 0.73
SNRPA1-213ENST00000560856 METTL22Q9BUU2 404 aaPredicted RBP19.61■□□□□ 0.73
SNRPA1-213ENST00000560856 PI4KAP2A4QPH2 592 aa19.6■□□□□ 0.73
SNRPA1-213ENST00000560856 DDX58O95786 925 aaKnown RBP19.6■□□□□ 0.73
SNRPA1-213ENST00000560856 FLIIQ13045 1269 aa19.6■□□□□ 0.73
SNRPA1-213ENST00000560856 ARHGAP27Q6ZUM4 889 aa19.6■□□□□ 0.73
SNRPA1-213ENST00000560856 PI4KAP1Q8N8J0 262 aa19.6■□□□□ 0.73
SNRPA1-213ENST00000560856 CNKSR1Q969H4 720 aa19.6■□□□□ 0.73
SNRPA1-213ENST00000560856 ZNF428Q96B54 188 aa19.6■□□□□ 0.73
SNRPA1-213ENST00000560856 TRMT112Q9UI30 125 aaKnown RBP19.6■□□□□ 0.73
SNRPA1-213ENST00000560856 CACNA1FO60840 1977 aa19.59■□□□□ 0.73
SNRPA1-213ENST00000560856 C7orf43Q8WVR3 580 aa19.59■□□□□ 0.73
SNRPA1-213ENST00000560856 MYD88Q99836 296 aa19.59■□□□□ 0.73
SNRPA1-213ENST00000560856 MAP3K2Q9Y2U5 619 aa19.59■□□□□ 0.73
SNRPA1-213ENST00000560856 SLX4Q8IY92 1834 aa19.58■□□□□ 0.73
SNRPA1-213ENST00000560856 SH3TC1Q8TE82 1336 aa19.58■□□□□ 0.73
SNRPA1-213ENST00000560856 HOXA10P31260 410 aaPredicted RBP19.58■□□□□ 0.72
SNRPA1-213ENST00000560856 PRPF40BQ6NWY9 871 aaKnown RBP19.58■□□□□ 0.72
SNRPA1-213ENST00000560856 IGKV5-2P06315 115 aa19.57■□□□□ 0.72
SNRPA1-213ENST00000560856 HCLS1P14317 486 aaPredicted RBP19.57■□□□□ 0.72
SNRPA1-213ENST00000560856 CCDC191Q8NCU4 936 aa19.56■□□□□ 0.72
SNRPA1-213ENST00000560856 FAM89AQ96GI7 184 aa19.56■□□□□ 0.72
SNRPA1-213ENST00000560856 NLRP3Q96P20 1036 aa19.56■□□□□ 0.72
SNRPA1-213ENST00000560856 NFKBIEO00221 500 aa19.55■□□□□ 0.72
SNRPA1-213ENST00000560856 C21orf2O43822 256 aa19.55■□□□□ 0.72
SNRPA1-213ENST00000560856 PRELPP51888 382 aa19.55■□□□□ 0.72
SNRPA1-213ENST00000560856 FKBP5Q13451 457 aaPredicted RBP19.54■□□□□ 0.72
SNRPA1-213ENST00000560856 CRAMP1Q96RY5 1269 aa19.54■□□□□ 0.72
SNRPA1-213ENST00000560856 ZNF219Q9P2Y4 722 aaPredicted RBP19.54■□□□□ 0.72
SNRPA1-213ENST00000560856 ALDH1B1P30837 517 aa19.53■□□□□ 0.72
SNRPA1-213ENST00000560856 HNRNPUQ00839 825 aaKnown RBP eCLIP19.53■□□□□ 0.72
SNRPA1-213ENST00000560856 MRPL50Q8N5N7 158 aaKnown RBP19.53■□□□□ 0.72
SNRPA1-213ENST00000560856 ZBTB38Q8NAP3 1195 aaPredicted RBP19.53■□□□□ 0.72
SNRPA1-213ENST00000560856 ZNF784Q8NCA9 323 aaPredicted RBP19.53■□□□□ 0.72
SNRPA1-213ENST00000560856 DNAAF4Q8WXU2 420 aa19.53■□□□□ 0.72
SNRPA1-213ENST00000560856 CWC25Q9NXE8 425 aaPredicted RBP19.53■□□□□ 0.72
SNRPA1-213ENST00000560856 NEURL1BA8MQ27 555 aa19.52■□□□□ 0.72
SNRPA1-213ENST00000560856 PCCAP05165 728 aaPredicted RBP19.52■□□□□ 0.72
SNRPA1-213ENST00000560856 RASSF7Q02833 373 aa19.52■□□□□ 0.72
SNRPA1-213ENST00000560856 CWF19L2Q2TBE0 894 aaKnown RBP19.52■□□□□ 0.72
SNRPA1-213ENST00000560856 RTL5Q5HYW3 569 aaPredicted RBP19.52■□□□□ 0.72
SNRPA1-213ENST00000560856 SSH1Q8WYL5 1049 aa19.52■□□□□ 0.72
SNRPA1-213ENST00000560856 RPGRQ92834 1020 aaKnown RBP19.52■□□□□ 0.72
SNRPA1-213ENST00000560856 DDX60Q8IY21 1712 aaKnown RBP19.51■□□□□ 0.71
SNRPA1-213ENST00000560856 F6X3S4 739 aa19.51■□□□□ 0.71
SNRPA1-213ENST00000560856 IRS4O14654 1257 aaPredicted RBP19.51■□□□□ 0.71
SNRPA1-213ENST00000560856 SF3B3Q15393 1217 aaKnown RBP19.51■□□□□ 0.71
SNRPA1-213ENST00000560856 OLFM4Q6UX06 510 aa19.51■□□□□ 0.71
SNRPA1-213ENST00000560856 JARID2Q92833 1246 aaPredicted RBP19.51■□□□□ 0.71
SNRPA1-213ENST00000560856 RBM17Q96I25 401 aaKnown RBP19.51■□□□□ 0.71
SNRPA1-213ENST00000560856 LAMB2P55268 1798 aa19.51■□□□□ 0.71
SNRPA1-213ENST00000560856 SNED1Q8TER0 1413 aa19.51■□□□□ 0.71
SNRPA1-213ENST00000560856 SBF1O95248 1867 aa19.5■□□□□ 0.71
SNRPA1-213ENST00000560856 CACNA1SQ13698 1873 aa19.5■□□□□ 0.71
SNRPA1-213ENST00000560856 C9orf131Q5VYM1 1079 aa19.5■□□□□ 0.71
SNRPA1-213ENST00000560856 SLC51AQ86UW1 340 aa19.5■□□□□ 0.71
SNRPA1-213ENST00000560856 FER1L6Q2WGJ9 1857 aa19.5■□□□□ 0.71
SNRPA1-213ENST00000560856 CT47B1P0C2W7 299 aaPredicted RBP19.49■□□□□ 0.71
SNRPA1-213ENST00000560856 NEXNQ0ZGT2 675 aa19.49■□□□□ 0.71
SNRPA1-213ENST00000560856 LINS1Q8NG48 757 aa19.49■□□□□ 0.71
SNRPA1-213ENST00000560856 ABCC4O15439 1325 aa19.49■□□□□ 0.71
SNRPA1-213ENST00000560856 LTBP3Q9NS15 1303 aa19.49■□□□□ 0.71
SNRPA1-213ENST00000560856 H7C1W4 665 aa19.48■□□□□ 0.71
SNRPA1-213ENST00000560856 GCKRQ14397 625 aa19.48■□□□□ 0.71
SNRPA1-213ENST00000560856 ALDH1L2Q3SY69 923 aa19.48■□□□□ 0.71
SNRPA1-213ENST00000560856 BEND3Q5T5X7 828 aa19.48■□□□□ 0.71
SNRPA1-213ENST00000560856 SOGA3Q5TF21 947 aa19.48■□□□□ 0.71
SNRPA1-213ENST00000560856 CDHR2Q9BYE9 1310 aa19.48■□□□□ 0.71
SNRPA1-213ENST00000560856 CASP7P55210 303 aa19.47■□□□□ 0.71
SNRPA1-213ENST00000560856 CCDC93Q567U6 631 aa19.47■□□□□ 0.71
SNRPA1-213ENST00000560856 LMNB1P20700 586 aa19.46■□□□□ 0.71
SNRPA1-213ENST00000560856 BCL2L13Q9BXK5 485 aa19.46■□□□□ 0.71
SNRPA1-213ENST00000560856 RNF181Q9P0P0 153 aa19.46■□□□□ 0.71
SNRPA1-213ENST00000560856 PPEF1O14829 653 aaPredicted RBP19.45■□□□□ 0.7
SNRPA1-213ENST00000560856 PDE8AO60658 829 aa19.45■□□□□ 0.7
SNRPA1-213ENST00000560856 BBOX1O75936 387 aa19.45■□□□□ 0.7
SNRPA1-213ENST00000560856 CC2D2BQ6DHV5 1058 aa19.45■□□□□ 0.7
SNRPA1-213ENST00000560856 DDX46Q7L014 1031 aaKnown RBP19.45■□□□□ 0.7
SNRPA1-213ENST00000560856 TAOK3Q9H2K8 898 aa19.45■□□□□ 0.7
SNRPA1-213ENST00000560856 ZBED9Q6R2W3 1325 aa19.45■□□□□ 0.7
SNRPA1-213ENST00000560856 TAF1P21675 1872 aa19.44■□□□□ 0.7
SNRPA1-213ENST00000560856 COL4A1P02462 1669 aa19.44■□□□□ 0.7
SNRPA1-213ENST00000560856 BRPF1P55201 1214 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms