RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 FAM157BP0CG42 384 aa6.72□□□□□ -1.33
USP8-211ENST00000560527 ITGA6P23229 1130 aa6.72□□□□□ -1.33
USP8-211ENST00000560527 MZF1P28698 734 aaPredicted RBP6.72□□□□□ -1.33
USP8-211ENST00000560527 INPP5BP32019 993 aa6.72□□□□□ -1.33
USP8-211ENST00000560527 USP5P45974 858 aa6.72□□□□□ -1.33
USP8-211ENST00000560527 ARSDP51689 593 aa6.72□□□□□ -1.33
USP8-211ENST00000560527 FAM26DQ5JW98 314 aa6.72□□□□□ -1.33
USP8-211ENST00000560527 KANK3Q6NY19 840 aa6.72□□□□□ -1.33
USP8-211ENST00000560527 SVOPQ8N4V2 548 aa6.72□□□□□ -1.33
USP8-211ENST00000560527 HSH2DQ96JZ2 352 aa6.72□□□□□ -1.33
USP8-211ENST00000560527 NUCKS1Q9H1E3 243 aaKnown RBP6.72□□□□□ -1.33
USP8-211ENST00000560527 BRPF3Q9ULD4 1205 aa6.72□□□□□ -1.33
USP8-211ENST00000560527 EPB42P16452 691 aa6.71□□□□□ -1.34
USP8-211ENST00000560527 IRS1P35568 1242 aa6.71□□□□□ -1.34
USP8-211ENST00000560527 IDH3AP50213 366 aa6.71□□□□□ -1.34
USP8-211ENST00000560527 KCNQ4P56696 695 aa6.71□□□□□ -1.34
USP8-211ENST00000560527 TYRO3Q06418 890 aa6.71□□□□□ -1.34
USP8-211ENST00000560527 LAMC2Q13753 1193 aa6.71□□□□□ -1.34
USP8-211ENST00000560527 UBAP2LQ14157 1087 aaKnown RBP6.71□□□□□ -1.34
USP8-211ENST00000560527 DNAJC14Q6Y2X3 702 aaPredicted RBP6.71□□□□□ -1.34
USP8-211ENST00000560527 RIPOR1Q6ZS17 1223 aa6.71□□□□□ -1.34
USP8-211ENST00000560527 KLRG1Q96E93 195 aa6.71□□□□□ -1.34
USP8-211ENST00000560527 ASB16Q96NS5 453 aa6.71□□□□□ -1.34
USP8-211ENST00000560527 PCDHGC4Q9Y5F7 938 aa6.71□□□□□ -1.34
USP8-211ENST00000560527 OPLAHO14841 1288 aa6.7□□□□□ -1.34
USP8-211ENST00000560527 EFSO43281 561 aa6.7□□□□□ -1.34
USP8-211ENST00000560527 THBS1P07996 1170 aa6.7□□□□□ -1.34
USP8-211ENST00000560527 PCSK2P16519 638 aa6.7□□□□□ -1.34
USP8-211ENST00000560527 MAPK1P28482 360 aa6.7□□□□□ -1.34
USP8-211ENST00000560527 AAMPQ13685 434 aa6.7□□□□□ -1.34
USP8-211ENST00000560527 DBN1Q16643 649 aa6.7□□□□□ -1.34
USP8-211ENST00000560527 ZSCAN29Q8IWY8 852 aaPredicted RBP6.7□□□□□ -1.34
USP8-211ENST00000560527 NANOS1Q8WY41 292 aaKnown RBP6.7□□□□□ -1.34
USP8-211ENST00000560527 PIK3R5Q8WYR1 880 aa6.7□□□□□ -1.34
USP8-211ENST00000560527 ZCCHC2Q9C0B9 1178 aaKnown RBP6.7□□□□□ -1.34
USP8-211ENST00000560527 ATXN7O15265 892 aaPredicted RBP6.69□□□□□ -1.34
USP8-211ENST00000560527 PDGFAP04085 211 aa6.69□□□□□ -1.34
USP8-211ENST00000560527 EHHADHQ08426 723 aa6.69□□□□□ -1.34
USP8-211ENST00000560527 PDE3BQ13370 1112 aa6.69□□□□□ -1.34
USP8-211ENST00000560527 ATCAYQ86WG3 371 aa6.69□□□□□ -1.34
USP8-211ENST00000560527 RGL4Q8IZJ4 473 aa6.69□□□□□ -1.34
USP8-211ENST00000560527 GJD3Q8N144 294 aa6.69□□□□□ -1.34
USP8-211ENST00000560527 ZNF837Q96EG3 531 aaPredicted RBP6.69□□□□□ -1.34
USP8-211ENST00000560527 SCARF2Q96GP6 870 aaPredicted RBP6.69□□□□□ -1.34
USP8-211ENST00000560527 DMRTB1Q96MA1 342 aa6.69□□□□□ -1.34
USP8-211ENST00000560527 CEP63Q96MT8 703 aa6.69□□□□□ -1.34
USP8-211ENST00000560527 COL25A1Q9BXS0 654 aaPredicted RBP6.69□□□□□ -1.34
USP8-211ENST00000560527 BRD7Q9NPI1 651 aa6.69□□□□□ -1.34
USP8-211ENST00000560527 NDFIP2Q9NV92 336 aa6.69□□□□□ -1.34
USP8-211ENST00000560527 EGFRP00533 1210 aa6.68□□□□□ -1.34
USP8-211ENST00000560527 COL19A1Q14993 1142 aa6.68□□□□□ -1.34
USP8-211ENST00000560527 RGS22Q8NE09 1264 aa6.68□□□□□ -1.34
USP8-211ENST00000560527 GPR152Q8TDT2 470 aa6.68□□□□□ -1.34
USP8-211ENST00000560527 EDEM1Q92611 657 aa6.68□□□□□ -1.34
USP8-211ENST00000560527 FAM129BQ96TA1 746 aa6.68□□□□□ -1.34
USP8-211ENST00000560527 CFHR5Q9BXR6 569 aa6.68□□□□□ -1.34
USP8-211ENST00000560527 CCDC87Q9NVE4 849 aa6.68□□□□□ -1.34
USP8-211ENST00000560527 CUEDC1Q9NWM3 386 aaPredicted RBP6.68□□□□□ -1.34
USP8-211ENST00000560527 ATXN7L1Q9ULK2 861 aaPredicted RBP6.68□□□□□ -1.34
USP8-211ENST00000560527 POLIQ9UNA4 740 aa6.68□□□□□ -1.34
USP8-211ENST00000560527 FNDC3AQ9Y2H6 1198 aaKnown RBP6.68□□□□□ -1.34
USP8-211ENST00000560527 RTCBQ9Y3I0 505 aaKnown RBP6.68□□□□□ -1.34
USP8-211ENST00000560527 DNM1Q05193 864 aaKnown RBP6.67□□□□□ -1.34
USP8-211ENST00000560527 TNP2Q05952 138 aa6.67□□□□□ -1.34
USP8-211ENST00000560527 FOXR1Q6PIV2 292 aa6.67□□□□□ -1.34
USP8-211ENST00000560527 XKR5Q6UX68 686 aa6.67□□□□□ -1.34
USP8-211ENST00000560527 GPR161Q8N6U8 529 aaKnown RBP6.67□□□□□ -1.34
USP8-211ENST00000560527 ALKBH8Q96BT7 664 aaKnown RBP6.67□□□□□ -1.34
USP8-211ENST00000560527 NUDT16Q96DE0 195 aaKnown RBP6.67□□□□□ -1.34
USP8-211ENST00000560527 EFCC1Q9HA90 598 aa6.67□□□□□ -1.34
USP8-211ENST00000560527 PHF24Q9UPV7 400 aa6.67□□□□□ -1.34
USP8-211ENST00000560527 AMOTL2Q9Y2J4 779 aa6.67□□□□□ -1.34
USP8-211ENST00000560527 BNIP3LO60238 219 aa6.66□□□□□ -1.34
USP8-211ENST00000560527 IGHA2P01877 340 aa6.66□□□□□ -1.34
USP8-211ENST00000560527 KRT76Q01546 638 aa6.66□□□□□ -1.34
USP8-211ENST00000560527 FAM182BQ5T319 152 aa6.66□□□□□ -1.34
USP8-211ENST00000560527 ZNF385CQ66K41 422 aaPredicted RBP6.66□□□□□ -1.34
USP8-211ENST00000560527 PDE12Q6L8Q7 609 aaKnown RBP6.66□□□□□ -1.34
USP8-211ENST00000560527 TTC16Q8NEE8 873 aa6.66□□□□□ -1.34
USP8-211ENST00000560527 KCNH4Q9UQ05 1017 aa6.66□□□□□ -1.34
USP8-211ENST00000560527 ANKRD33BA6NCL7 494 aa6.65□□□□□ -1.34
USP8-211ENST00000560527 TREHO43280 583 aa6.65□□□□□ -1.34
USP8-211ENST00000560527 MAPTP10636 758 aaKnown RBP6.65□□□□□ -1.34
USP8-211ENST00000560527 GRNP28799 593 aaKnown RBP6.65□□□□□ -1.34
USP8-211ENST00000560527 SV2AQ7L0J3 742 aa6.65□□□□□ -1.34
USP8-211ENST00000560527 TMC7Q7Z402 723 aa6.65□□□□□ -1.34
USP8-211ENST00000560527 GTPBP3Q969Y2 492 aaKnown RBP6.65□□□□□ -1.34
USP8-211ENST00000560527 TRERF1Q96PN7 1200 aa6.65□□□□□ -1.34
USP8-211ENST00000560527 KCNMB2Q9Y691 235 aa6.65□□□□□ -1.34
USP8-211ENST00000560527 KHNYNO15037 678 aaKnown RBP6.64□□□□□ -1.35
USP8-211ENST00000560527 NEFLP07196 543 aa6.64□□□□□ -1.35
USP8-211ENST00000560527 MAP3K10Q02779 954 aa6.64□□□□□ -1.35
USP8-211ENST00000560527 DSC3Q14574 896 aa6.64□□□□□ -1.35
USP8-211ENST00000560527 NPAS4Q8IUM7 802 aa6.64□□□□□ -1.35
USP8-211ENST00000560527 MARK1Q9P0L2 795 aa6.64□□□□□ -1.35
USP8-211ENST00000560527 DCDC2BA2VCK2 349 aa6.63□□□□□ -1.35
USP8-211ENST00000560527 FMR1Q06787 632 aaKnown RBP eCLIP6.63□□□□□ -1.35
USP8-211ENST00000560527 SFSWAPQ12872 951 aaKnown RBP6.63□□□□□ -1.35
USP8-211ENST00000560527 CMTR1Q8N1G2 835 aaKnown RBP6.63□□□□□ -1.35
USP8-211ENST00000560527 VWA5B2Q8N398 1253 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms