RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 CHRNA5P30532 468 aa19.8■□□□□ 0.76
LYSMD2-204ENST00000560491 ERFEQ4G0M1 354 aa19.8■□□□□ 0.76
LYSMD2-204ENST00000560491 DPEP1P16444 411 aa19.79■□□□□ 0.76
LYSMD2-204ENST00000560491 GTF2E1P29083 439 aaPredicted RBP19.79■□□□□ 0.76
LYSMD2-204ENST00000560491 RARSP54136 660 aaKnown RBP19.79■□□□□ 0.76
LYSMD2-204ENST00000560491 TGFB2P61812 414 aa19.79■□□□□ 0.76
LYSMD2-204ENST00000560491 PPP1R42Q7Z4L9 355 aa19.79■□□□□ 0.76
LYSMD2-204ENST00000560491 UTP14AQ9BVJ6 771 aaKnown RBP19.79■□□□□ 0.76
LYSMD2-204ENST00000560491 DDX60Q8IY21 1712 aaKnown RBP19.79■□□□□ 0.76
LYSMD2-204ENST00000560491 CACNA1SQ13698 1873 aa19.78■□□□□ 0.76
LYSMD2-204ENST00000560491 DNAAF4Q8WXU2 420 aa19.78■□□□□ 0.76
LYSMD2-204ENST00000560491 BRIP1Q9BX63 1249 aa19.78■□□□□ 0.76
LYSMD2-204ENST00000560491 LAMB2P55268 1798 aa19.78■□□□□ 0.76
LYSMD2-204ENST00000560491 IGKV5-2P06315 115 aa19.77■□□□□ 0.76
LYSMD2-204ENST00000560491 CWF19L2Q2TBE0 894 aaKnown RBP19.77■□□□□ 0.76
LYSMD2-204ENST00000560491 SYNE4Q8N205 404 aa19.77■□□□□ 0.76
LYSMD2-204ENST00000560491 TRMT112Q9UI30 125 aaKnown RBP19.77■□□□□ 0.76
LYSMD2-204ENST00000560491 GOLGB1Q14789 3259 aaKnown RBP19.76■□□□□ 0.75
LYSMD2-204ENST00000560491 KCNA3P22001 575 aa19.76■□□□□ 0.75
LYSMD2-204ENST00000560491 NEXNQ0ZGT2 675 aa19.76■□□□□ 0.75
LYSMD2-204ENST00000560491 TRIM28Q13263 835 aaKnown RBP19.76■□□□□ 0.75
LYSMD2-204ENST00000560491 C2CD5Q86YS7 1000 aa19.76■□□□□ 0.75
LYSMD2-204ENST00000560491 PDE6BP35913 854 aa19.75■□□□□ 0.75
LYSMD2-204ENST00000560491 RTL5Q5HYW3 569 aaPredicted RBP19.75■□□□□ 0.75
LYSMD2-204ENST00000560491 PELP1Q8IZL8 1130 aaKnown RBP19.75■□□□□ 0.75
LYSMD2-204ENST00000560491 CCDC191Q8NCU4 936 aa19.75■□□□□ 0.75
LYSMD2-204ENST00000560491 CWC25Q9NXE8 425 aaPredicted RBP19.75■□□□□ 0.75
LYSMD2-204ENST00000560491 RIC1Q4ADV7 1423 aa19.75■□□□□ 0.75
LYSMD2-204ENST00000560491 PTPRCP08575 1304 aa19.75■□□□□ 0.75
LYSMD2-204ENST00000560491 NEURL1BA8MQ27 555 aa19.74■□□□□ 0.75
LYSMD2-204ENST00000560491 BCAR3O75815 825 aa19.74■□□□□ 0.75
LYSMD2-204ENST00000560491 JARID2Q92833 1246 aaPredicted RBP19.74■□□□□ 0.75
LYSMD2-204ENST00000560491 FAM89AQ96GI7 184 aa19.74■□□□□ 0.75
LYSMD2-204ENST00000560491 RNF123Q5XPI4 1314 aa19.74■□□□□ 0.75
LYSMD2-204ENST00000560491 SH3TC1Q8TE82 1336 aa19.74■□□□□ 0.75
LYSMD2-204ENST00000560491 H0YIN7 160 aa19.73■□□□□ 0.75
LYSMD2-204ENST00000560491 SLC4A10Q6U841 1118 aa19.73■□□□□ 0.75
LYSMD2-204ENST00000560491 C3orf67Q6ZVT6 689 aa19.73■□□□□ 0.75
LYSMD2-204ENST00000560491 NOB1Q9ULX3 412 aaKnown RBP19.73■□□□□ 0.75
LYSMD2-204ENST00000560491 HCLS1P14317 486 aaPredicted RBP19.72■□□□□ 0.75
LYSMD2-204ENST00000560491 YBX3P16989 372 aaKnown RBP eCLIP19.72■□□□□ 0.75
LYSMD2-204ENST00000560491 BRPF1P55201 1214 aaPredicted RBP19.72■□□□□ 0.75
LYSMD2-204ENST00000560491 BEND3Q5T5X7 828 aa19.72■□□□□ 0.75
LYSMD2-204ENST00000560491 ARFGEF1Q9Y6D6 1849 aa19.72■□□□□ 0.75
LYSMD2-204ENST00000560491 ZBTB38Q8NAP3 1195 aaPredicted RBP19.71■□□□□ 0.75
LYSMD2-204ENST00000560491 LINS1Q8NG48 757 aa19.71■□□□□ 0.75
LYSMD2-204ENST00000560491 KIF16BQ96L93 1317 aa19.71■□□□□ 0.75
LYSMD2-204ENST00000560491 KLRG2A4D1S0 409 aaPredicted RBP19.7■□□□□ 0.74
LYSMD2-204ENST00000560491 SRGNP10124 158 aa19.7■□□□□ 0.74
LYSMD2-204ENST00000560491 GPR162Q16538 588 aa19.7■□□□□ 0.74
LYSMD2-204ENST00000560491 SLC10A5Q5PT55 438 aa19.7■□□□□ 0.74
LYSMD2-204ENST00000560491 ZNF622Q969S3 477 aaKnown RBP eCLIP19.7■□□□□ 0.74
LYSMD2-204ENST00000560491 PIM2Q9P1W9 311 aa19.7■□□□□ 0.74
LYSMD2-204ENST00000560491 BCS1LQ9Y276 419 aa19.7■□□□□ 0.74
LYSMD2-204ENST00000560491 IRS4O14654 1257 aaPredicted RBP19.69■□□□□ 0.74
LYSMD2-204ENST00000560491 PCCAP05165 728 aaPredicted RBP19.69■□□□□ 0.74
LYSMD2-204ENST00000560491 GCKRQ14397 625 aa19.69■□□□□ 0.74
LYSMD2-204ENST00000560491 PDZRN3Q9UPQ7 1066 aa19.69■□□□□ 0.74
LYSMD2-204ENST00000560491 SLX4Q8IY92 1834 aa19.69■□□□□ 0.74
LYSMD2-204ENST00000560491 MYH3P11055 1940 aa19.68■□□□□ 0.74
LYSMD2-204ENST00000560491 UTRNP46939 3433 aa19.68■□□□□ 0.74
LYSMD2-204ENST00000560491 CRY2Q49AN0 593 aa19.68■□□□□ 0.74
LYSMD2-204ENST00000560491 DALRD3Q5D0E6 543 aaKnown RBP19.68■□□□□ 0.74
LYSMD2-204ENST00000560491 UBE3BQ7Z3V4 1068 aa19.68■□□□□ 0.74
LYSMD2-204ENST00000560491 FRAT1Q92837 279 aaPredicted RBP19.68■□□□□ 0.74
LYSMD2-204ENST00000560491 MASTLQ96GX5 879 aa19.68■□□□□ 0.74
LYSMD2-204ENST00000560491 NLRP3Q96P20 1036 aa19.68■□□□□ 0.74
LYSMD2-204ENST00000560491 TAF1P21675 1872 aa19.68■□□□□ 0.74
LYSMD2-204ENST00000560491 NPR1P16066 1061 aa19.67■□□□□ 0.74
LYSMD2-204ENST00000560491 STYK1Q6J9G0 422 aa19.67■□□□□ 0.74
LYSMD2-204ENST00000560491 API5Q9BZZ5 524 aaKnown RBP19.67■□□□□ 0.74
LYSMD2-204ENST00000560491 SRCIN1Q9C0H9 1055 aa19.67■□□□□ 0.74
LYSMD2-204ENST00000560491 TNNQ9UQP3 1299 aa19.67■□□□□ 0.74
LYSMD2-204ENST00000560491 TTLL6Q8N841 843 aa19.66■□□□□ 0.74
LYSMD2-204ENST00000560491 RPGRQ92834 1020 aaKnown RBP19.66■□□□□ 0.74
LYSMD2-204ENST00000560491 DCAF8L1A6NGE4 600 aa19.65■□□□□ 0.74
LYSMD2-204ENST00000560491 H7C1W4 665 aa19.65■□□□□ 0.74
LYSMD2-204ENST00000560491 ALDH1L1O75891 902 aa19.65■□□□□ 0.74
LYSMD2-204ENST00000560491 TRIM27P14373 513 aa19.65■□□□□ 0.74
LYSMD2-204ENST00000560491 CDHR2Q9BYE9 1310 aa19.65■□□□□ 0.74
LYSMD2-204ENST00000560491 COL4A1P02462 1669 aa19.65■□□□□ 0.74
LYSMD2-204ENST00000560491 CASP7P55210 303 aa19.64■□□□□ 0.73
LYSMD2-204ENST00000560491 PRPF40BQ6NWY9 871 aaKnown RBP19.64■□□□□ 0.73
LYSMD2-204ENST00000560491 ARHGAP45Q92619 1136 aa19.64■□□□□ 0.73
LYSMD2-204ENST00000560491 CNKSR1Q969H4 720 aa19.64■□□□□ 0.73
LYSMD2-204ENST00000560491 GRM8O00222 908 aa19.63■□□□□ 0.73
LYSMD2-204ENST00000560491 HOXA10P31260 410 aaPredicted RBP19.63■□□□□ 0.73
LYSMD2-204ENST00000560491 ATF7IPQ6VMQ6 1270 aa19.63■□□□□ 0.73
LYSMD2-204ENST00000560491 ZNF219Q9P2Y4 722 aaPredicted RBP19.63■□□□□ 0.73
LYSMD2-204ENST00000560491 RCAN3Q9UKA8 241 aa19.63■□□□□ 0.73
LYSMD2-204ENST00000560491 ABCC4O15439 1325 aa19.62■□□□□ 0.73
LYSMD2-204ENST00000560491 IPO8O15397 1037 aaKnown RBP19.62■□□□□ 0.73
LYSMD2-204ENST00000560491 PDE8AO60658 829 aa19.62■□□□□ 0.73
LYSMD2-204ENST00000560491 ZKSCAN2Q63HK3 967 aa19.62■□□□□ 0.73
LYSMD2-204ENST00000560491 CLUAP1Q96AJ1 413 aa19.62■□□□□ 0.73
LYSMD2-204ENST00000560491 RBM17Q96I25 401 aaKnown RBP19.62■□□□□ 0.73
LYSMD2-204ENST00000560491 CCDC85AQ96PX6 553 aaPredicted RBP19.62■□□□□ 0.73
LYSMD2-204ENST00000560491 C9orf78Q9NZ63 289 aaPredicted RBP19.62■□□□□ 0.73
LYSMD2-204ENST00000560491 SF3B3Q15393 1217 aaKnown RBP19.61■□□□□ 0.73
LYSMD2-204ENST00000560491 SPEF2Q9C093 1822 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms