RNA–Protein interactions for RNA: ENST00000560390.1

TM2D3-211, Transcript of TM2 domain containing 3, humanhuman

Gene TM2D3, Length 3,102 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-211ENST00000560390 USPL1Q5W0Q7 1092 aa7.05□□□□□ -1.28
TM2D3-211ENST00000560390 SAMD1Q6SPF0 538 aaPredicted RBP7.05□□□□□ -1.28
TM2D3-211ENST00000560390 CNKSR2Q8WXI2 1034 aa7.05□□□□□ -1.28
TM2D3-211ENST00000560390 MAP3K15Q6ZN16 1313 aa7.05□□□□□ -1.28
TM2D3-211ENST00000560390 SRCIN1Q9C0H9 1055 aa7.05□□□□□ -1.28
TM2D3-211ENST00000560390 SRCAPQ6ZRS2 3230 aa7.05□□□□□ -1.28
TM2D3-211ENST00000560390 NPHP1O15259 732 aa7.04□□□□□ -1.28
TM2D3-211ENST00000560390 SSFA2P28290 1259 aa7.04□□□□□ -1.28
TM2D3-211ENST00000560390 ZNF652Q9Y2D9 606 aa7.04□□□□□ -1.28
TM2D3-211ENST00000560390 ADCY9O60503 1353 aa7.04□□□□□ -1.28
TM2D3-211ENST00000560390 CCT4P50991 539 aaKnown RBP7.04□□□□□ -1.28
TM2D3-211ENST00000560390 GIGYF2Q6Y7W6 1299 aaKnown RBP7.04□□□□□ -1.28
TM2D3-211ENST00000560390 AKT1S1Q96B36 256 aa7.04□□□□□ -1.28
TM2D3-211ENST00000560390 METTL22Q9BUU2 404 aaPredicted RBP7.04□□□□□ -1.28
TM2D3-211ENST00000560390 UPF2Q9HAU5 1272 aaKnown RBP7.04□□□□□ -1.28
TM2D3-211ENST00000560390 C9orf78Q9NZ63 289 aaPredicted RBP7.04□□□□□ -1.28
TM2D3-211ENST00000560390 CAMTA2O94983 1202 aa7.03□□□□□ -1.28
TM2D3-211ENST00000560390 XRCC6P12956 609 aaKnown RBP eCLIP7.03□□□□□ -1.28
TM2D3-211ENST00000560390 LINS1Q8NG48 757 aa7.03□□□□□ -1.28
TM2D3-211ENST00000560390 NARFQ9UHQ1 456 aa7.03□□□□□ -1.28
TM2D3-211ENST00000560390 NIP7Q9Y221 180 aaKnown RBP eCLIP7.03□□□□□ -1.28
TM2D3-211ENST00000560390 ABCC4O15439 1325 aa7.03□□□□□ -1.28
TM2D3-211ENST00000560390 ERVV-1B6SEH8 477 aa7.03□□□□□ -1.28
TM2D3-211ENST00000560390 TCIRG1Q13488 830 aa7.03□□□□□ -1.28
TM2D3-211ENST00000560390 MVPQ14764 893 aaKnown RBP7.03□□□□□ -1.28
TM2D3-211ENST00000560390 BEND3Q5T5X7 828 aa7.03□□□□□ -1.28
TM2D3-211ENST00000560390 COL23A1Q86Y22 540 aaPredicted RBP7.03□□□□□ -1.28
TM2D3-211ENST00000560390 FAM43AQ8N2R8 423 aa7.03□□□□□ -1.28
TM2D3-211ENST00000560390 FLAD1Q8NFF5 587 aa7.03□□□□□ -1.28
TM2D3-211ENST00000560390 JARID2Q92833 1246 aaPredicted RBP7.03□□□□□ -1.28
TM2D3-211ENST00000560390 RWDD1Q9H446 243 aaPredicted RBP7.03□□□□□ -1.28
TM2D3-211ENST00000560390 TJP1Q07157 1748 aa7.03□□□□□ -1.28
TM2D3-211ENST00000560390 IGKV5-2P06315 115 aa7.03□□□□□ -1.28
TM2D3-211ENST00000560390 BRD2P25440 801 aaKnown RBP7.03□□□□□ -1.28
TM2D3-211ENST00000560390 GTF2E1P29083 439 aaPredicted RBP7.03□□□□□ -1.28
TM2D3-211ENST00000560390 R3HDM1Q15032 1099 aaKnown RBP7.03□□□□□ -1.28
TM2D3-211ENST00000560390 HSP90AB3PQ58FF7 597 aa7.03□□□□□ -1.28
TM2D3-211ENST00000560390 MSL1Q68DK7 614 aa7.03□□□□□ -1.28
TM2D3-211ENST00000560390 DDX19BQ9UMR2 479 aa7.03□□□□□ -1.28
TM2D3-211ENST00000560390 MYH14Q7Z406 1995 aaKnown RBP7.02□□□□□ -1.28
TM2D3-211ENST00000560390 USP42Q9H9J4 1324 aaKnown RBP7.02□□□□□ -1.29
TM2D3-211ENST00000560390 TNS1Q9HBL0 1735 aaKnown RBP7.02□□□□□ -1.29
TM2D3-211ENST00000560390 INTS3Q68E01 1043 aaKnown RBP7.02□□□□□ -1.29
TM2D3-211ENST00000560390 SETDB2Q96T68 719 aa7.02□□□□□ -1.29
TM2D3-211ENST00000560390 C22orf23Q9BZE7 217 aa7.02□□□□□ -1.29
TM2D3-211ENST00000560390 PDGFDQ9GZP0 370 aaPredicted RBP7.02□□□□□ -1.29
TM2D3-211ENST00000560390 LY75O60449 1722 aa7.02□□□□□ -1.29
TM2D3-211ENST00000560390 PNPLA7Q6ZV29 1317 aa7.02□□□□□ -1.29
TM2D3-211ENST00000560390 PSDA5PKW4 1024 aaPredicted RBP7.02□□□□□ -1.29
TM2D3-211ENST00000560390 NEURL1BA8MQ27 555 aa7.02□□□□□ -1.29
TM2D3-211ENST00000560390 CLEC4GQ6UXB4 293 aa7.02□□□□□ -1.29
TM2D3-211ENST00000560390 MEIS3Q99687 375 aa7.02□□□□□ -1.29
TM2D3-211ENST00000560390 FOXD4L1Q9NU39 408 aa7.02□□□□□ -1.29
TM2D3-211ENST00000560390 CWC25Q9NXE8 425 aaPredicted RBP7.02□□□□□ -1.29
TM2D3-211ENST00000560390 TRMT112Q9UI30 125 aaKnown RBP7.02□□□□□ -1.29
TM2D3-211ENST00000560390 C4BP0C0L5 1744 aa7.02□□□□□ -1.29
TM2D3-211ENST00000560390 UBTFL1P0CB47 393 aaPredicted RBP7.01□□□□□ -1.29
TM2D3-211ENST00000560390 GYS1P13807 737 aa7.01□□□□□ -1.29
TM2D3-211ENST00000560390 MCM4P33991 863 aa7.01□□□□□ -1.29
TM2D3-211ENST00000560390 TBC1D9BQ66K14 1250 aa7.01□□□□□ -1.29
TM2D3-211ENST00000560390 UBE3BQ7Z3V4 1068 aa7.01□□□□□ -1.29
TM2D3-211ENST00000560390 FAM89AQ96GI7 184 aa7.01□□□□□ -1.29
TM2D3-211ENST00000560390 C1orf115Q9H7X2 142 aa7.01□□□□□ -1.29
TM2D3-211ENST00000560390 LAMB4A4D0S4 1761 aa7.01□□□□□ -1.29
TM2D3-211ENST00000560390 NBPF7P0C2Y1 421 aaPredicted RBP7.01□□□□□ -1.29
TM2D3-211ENST00000560390 GCKRQ14397 625 aa7.01□□□□□ -1.29
TM2D3-211ENST00000560390 CCDC191Q8NCU4 936 aa7.01□□□□□ -1.29
TM2D3-211ENST00000560390 BCL2L12Q9HB09 334 aa7.01□□□□□ -1.29
TM2D3-211ENST00000560390 GRM8O00222 908 aa7.01□□□□□ -1.29
TM2D3-211ENST00000560390 ALDH1L1O75891 902 aa7.01□□□□□ -1.29
TM2D3-211ENST00000560390 NLRP10Q86W26 655 aa7.01□□□□□ -1.29
TM2D3-211ENST00000560390 NLGN1Q8N2Q7 840 aa7.01□□□□□ -1.29
TM2D3-211ENST00000560390 USP44Q9H0E7 712 aa7.01□□□□□ -1.29
TM2D3-211ENST00000560390 ZBTB7BO15156 539 aaPredicted RBP7□□□□□ -1.29
TM2D3-211ENST00000560390 GNAI3P08754 354 aa7□□□□□ -1.29
TM2D3-211ENST00000560390 NFIXQ14938 502 aa7□□□□□ -1.29
TM2D3-211ENST00000560390 NBPF5PQ86XG9 351 aaPredicted RBP7□□□□□ -1.29
TM2D3-211ENST00000560390 NUTM1Q86Y26 1132 aa7□□□□□ -1.29
TM2D3-211ENST00000560390 CCDC24Q8N4L8 307 aa7□□□□□ -1.29
TM2D3-211ENST00000560390 LNPKQ9C0E8 428 aa7□□□□□ -1.29
TM2D3-211ENST00000560390 CHMP4BQ9H444 224 aaKnown RBP7□□□□□ -1.29
TM2D3-211ENST00000560390 UBN2Q6ZU65 1347 aa7□□□□□ -1.29
TM2D3-211ENST00000560390 GOLGA6L3A6NEY3 463 aa7□□□□□ -1.29
TM2D3-211ENST00000560390 TRAK2O60296 914 aa7□□□□□ -1.29
TM2D3-211ENST00000560390 ZBTB7AO95365 584 aa7□□□□□ -1.29
TM2D3-211ENST00000560390 SUSD4Q5VX71 490 aa7□□□□□ -1.29
TM2D3-211ENST00000560390 PPP1R42Q7Z4L9 355 aa7□□□□□ -1.29
TM2D3-211ENST00000560390 DHX37Q8IY37 1157 aaKnown RBP7□□□□□ -1.29
TM2D3-211ENST00000560390 ZNF34Q8IZ26 560 aa7□□□□□ -1.29
TM2D3-211ENST00000560390 SYNE4Q8N205 404 aa7□□□□□ -1.29
TM2D3-211ENST00000560390 ISCA1Q9BUE6 129 aa7□□□□□ -1.29
TM2D3-211ENST00000560390 ZNF831Q5JPB2 1677 aa6.99□□□□□ -1.29
TM2D3-211ENST00000560390 COL5A3P25940 1745 aaPredicted RBP6.99□□□□□ -1.29
TM2D3-211ENST00000560390 PARP10Q53GL7 1025 aa6.99□□□□□ -1.29
TM2D3-211ENST00000560390 TAF7LQ5H9L4 462 aa6.99□□□□□ -1.29
TM2D3-211ENST00000560390 UTP14AQ9BVJ6 771 aaKnown RBP6.99□□□□□ -1.29
TM2D3-211ENST00000560390 CHMP3Q9Y3E7 222 aa6.99□□□□□ -1.29
TM2D3-211ENST00000560390 MMP10P09238 476 aa6.99□□□□□ -1.29
TM2D3-211ENST00000560390 TRIM28Q13263 835 aaKnown RBP6.99□□□□□ -1.29
TM2D3-211ENST00000560390 TPTE2Q6XPS3 522 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms