RNA–Protein interactions for RNA: ENST00000559793.5

CTDSPL2-208, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-208ENST00000559793 PIGBQ92521 554 aa11.22□□□□□ -0.61
CTDSPL2-208ENST00000559793 SMARCC1Q92922 1105 aaPredicted RBP11.22□□□□□ -0.61
CTDSPL2-208ENST00000559793 AK7Q96M32 723 aa11.22□□□□□ -0.61
CTDSPL2-208ENST00000559793 TMUB1Q9BVT8 246 aa11.22□□□□□ -0.61
CTDSPL2-208ENST00000559793 GPBP1L1Q9HC44 474 aaPredicted RBP11.22□□□□□ -0.61
CTDSPL2-208ENST00000559793 SMG6Q86US8 1419 aaKnown RBP11.21□□□□□ -0.61
CTDSPL2-208ENST00000559793 ACTN4O43707 911 aaKnown RBP11.21□□□□□ -0.61
CTDSPL2-208ENST00000559793 CLCN1P35523 988 aa11.21□□□□□ -0.61
CTDSPL2-208ENST00000559793 TMF1P82094 1093 aa11.21□□□□□ -0.61
CTDSPL2-208ENST00000559793 RDH13Q8NBN7 331 aa11.21□□□□□ -0.61
CTDSPL2-208ENST00000559793 CARD14Q9BXL6 1004 aa11.21□□□□□ -0.61
CTDSPL2-208ENST00000559793 SLC24A3Q9HC58 644 aa11.21□□□□□ -0.61
CTDSPL2-208ENST00000559793 GPCPD1Q9NPB8 672 aa11.21□□□□□ -0.61
CTDSPL2-208ENST00000559793 WWC3Q9ULE0 1092 aa11.21□□□□□ -0.61
CTDSPL2-208ENST00000559793 UBR3Q6ZT12 1888 aa11.21□□□□□ -0.62
CTDSPL2-208ENST00000559793 C4BP0C0L5 1744 aa11.21□□□□□ -0.62
CTDSPL2-208ENST00000559793 TOGARAM1Q9Y4F4 1720 aa11.21□□□□□ -0.62
CTDSPL2-208ENST00000559793 FLT4P35916 1363 aa11.2□□□□□ -0.62
CTDSPL2-208ENST00000559793 KCNC4Q03721 635 aa11.2□□□□□ -0.62
CTDSPL2-208ENST00000559793 AMHR2Q16671 573 aa11.2□□□□□ -0.62
CTDSPL2-208ENST00000559793 ZNF526Q8TF50 670 aaPredicted RBP11.2□□□□□ -0.62
CTDSPL2-208ENST00000559793 MTRQ99707 1265 aa11.2□□□□□ -0.62
CTDSPL2-208ENST00000559793 EMILIN1Q9Y6C2 1016 aa11.2□□□□□ -0.62
CTDSPL2-208ENST00000559793 ADCY9O60503 1353 aa11.19□□□□□ -0.62
CTDSPL2-208ENST00000559793 KIF24Q5T7B8 1368 aa11.19□□□□□ -0.62
CTDSPL2-208ENST00000559793 MAP2P11137 1827 aaKnown RBP11.19□□□□□ -0.62
CTDSPL2-208ENST00000559793 IGSF1Q8N6C5 1336 aa11.19□□□□□ -0.62
CTDSPL2-208ENST00000559793 TRIM66O15016 1216 aa11.19□□□□□ -0.62
CTDSPL2-208ENST00000559793 LINC00116Q8NCU8 138 aa11.19□□□□□ -0.62
CTDSPL2-208ENST00000559793 REPIN1Q9BWE0 567 aaKnown RBP11.19□□□□□ -0.62
CTDSPL2-208ENST00000559793 IL21Q9HBE4 155 aa11.19□□□□□ -0.62
CTDSPL2-208ENST00000559793 LOC102724428A0A0B4J2F2 783 aa11.18□□□□□ -0.62
CTDSPL2-208ENST00000559793 CD46P15529 392 aa11.18□□□□□ -0.62
CTDSPL2-208ENST00000559793 HSPA6P17066 643 aa11.18□□□□□ -0.62
CTDSPL2-208ENST00000559793 SSFA2P28290 1259 aa11.18□□□□□ -0.62
CTDSPL2-208ENST00000559793 SIK1P57059 783 aa11.18□□□□□ -0.62
CTDSPL2-208ENST00000559793 ITPK1Q13572 414 aa11.18□□□□□ -0.62
CTDSPL2-208ENST00000559793 ASAP1Q9ULH1 1129 aa11.18□□□□□ -0.62
CTDSPL2-208ENST00000559793 SPG7Q9UQ90 795 aa11.18□□□□□ -0.62
CTDSPL2-208ENST00000559793 PCDHB3Q9Y5E6 796 aa11.18□□□□□ -0.62
CTDSPL2-208ENST00000559793 KIF20BQ96Q89 1820 aa11.18□□□□□ -0.62
CTDSPL2-208ENST00000559793 PPM1GO15355 546 aaPredicted RBP11.17□□□□□ -0.62
CTDSPL2-208ENST00000559793 GCGRP47871 477 aa11.17□□□□□ -0.62
CTDSPL2-208ENST00000559793 FAM217BQ9NTX9 383 aaPredicted RBP11.17□□□□□ -0.62
CTDSPL2-208ENST00000559793 PKD1L3Q7Z443 1732 aa11.17□□□□□ -0.62
CTDSPL2-208ENST00000559793 WASHC2AQ641Q2 1341 aa11.16□□□□□ -0.62
CTDSPL2-208ENST00000559793 ATP6V1AP38606 617 aa11.16□□□□□ -0.62
CTDSPL2-208ENST00000559793 ATG3Q9NT62 314 aa11.16□□□□□ -0.62
CTDSPL2-208ENST00000559793 NCAPD2Q15021 1401 aa11.16□□□□□ -0.62
CTDSPL2-208ENST00000559793 COPS2P61201 443 aa11.15□□□□□ -0.62
CTDSPL2-208ENST00000559793 CDCA8Q53HL2 280 aa11.15□□□□□ -0.62
CTDSPL2-208ENST00000559793 BLOC1S3Q6QNY0 202 aa11.15□□□□□ -0.62
CTDSPL2-208ENST00000559793 ZNF516Q92618 1163 aa11.15□□□□□ -0.62
CTDSPL2-208ENST00000559793 TMOD3Q9NYL9 352 aa11.15□□□□□ -0.62
CTDSPL2-208ENST00000559793 MMP10P09238 476 aa11.14□□□□□ -0.63
CTDSPL2-208ENST00000559793 PHKG2P15735 406 aa11.14□□□□□ -0.63
CTDSPL2-208ENST00000559793 IFNL2Q8IZJ0 200 aa11.14□□□□□ -0.63
CTDSPL2-208ENST00000559793 POLKQ9UBT6 870 aa11.14□□□□□ -0.63
CTDSPL2-208ENST00000559793 NSD3Q9BZ95 1437 aa11.13□□□□□ -0.63
CTDSPL2-208ENST00000559793 TTLL12Q14166 644 aaPredicted RBP11.13□□□□□ -0.63
CTDSPL2-208ENST00000559793 TRAPPC3LQ5T215 181 aa11.13□□□□□ -0.63
CTDSPL2-208ENST00000559793 SLC4A9Q96Q91 983 aa11.13□□□□□ -0.63
CTDSPL2-208ENST00000559793 A0A0G2JLW4 131 aa11.12□□□□□ -0.63
CTDSPL2-208ENST00000559793 TGFB2P61812 414 aa11.12□□□□□ -0.63
CTDSPL2-208ENST00000559793 N4BP2Q86UW6 1770 aaPredicted RBP11.12□□□□□ -0.63
CTDSPL2-208ENST00000559793 KIF13BQ9NQT8 1826 aa11.12□□□□□ -0.63
CTDSPL2-208ENST00000559793 ZPR1O75312 459 aa11.11□□□□□ -0.63
CTDSPL2-208ENST00000559793 SSTR3P32745 418 aaPredicted RBP11.11□□□□□ -0.63
CTDSPL2-208ENST00000559793 FUT2Q10981 343 aa11.11□□□□□ -0.63
CTDSPL2-208ENST00000559793 EIF4A2Q14240 407 aaKnown RBP11.11□□□□□ -0.63
CTDSPL2-208ENST00000559793 GIGYF2Q6Y7W6 1299 aaKnown RBP11.11□□□□□ -0.63
CTDSPL2-208ENST00000559793 PARP9Q8IXQ6 854 aa11.11□□□□□ -0.63
CTDSPL2-208ENST00000559793 NLGN1Q8N2Q7 840 aa11.11□□□□□ -0.63
CTDSPL2-208ENST00000559793 BCS1LQ9Y276 419 aa11.11□□□□□ -0.63
CTDSPL2-208ENST00000559793 RTCBQ9Y3I0 505 aaKnown RBP11.11□□□□□ -0.63
CTDSPL2-208ENST00000559793 KIAA1551Q9HCM1 1747 aa11.11□□□□□ -0.63
CTDSPL2-208ENST00000559793 ANKRD26Q9UPS8 1709 aa11.11□□□□□ -0.63
CTDSPL2-208ENST00000559793 PDE4DQ08499 809 aa11.1□□□□□ -0.63
CTDSPL2-208ENST00000559793 PUS10Q3MIT2 529 aaKnown RBP11.1□□□□□ -0.63
CTDSPL2-208ENST00000559793 RC3H1Q5TC82 1133 aaKnown RBP11.1□□□□□ -0.63
CTDSPL2-208ENST00000559793 DNAJC5GQ8N7S2 189 aa11.1□□□□□ -0.63
CTDSPL2-208ENST00000559793 PXDNLA1KZ92 1463 aa11.1□□□□□ -0.63
CTDSPL2-208ENST00000559793 MYH14Q7Z406 1995 aaKnown RBP11.1□□□□□ -0.63
CTDSPL2-208ENST00000559793 ERVV-2B6SEH9 535 aa11.09□□□□□ -0.63
CTDSPL2-208ENST00000559793 RPS6KA4O75676 772 aa11.09□□□□□ -0.63
CTDSPL2-208ENST00000559793 TOMM70O94826 608 aa11.09□□□□□ -0.63
CTDSPL2-208ENST00000559793 GYS1P13807 737 aa11.09□□□□□ -0.63
CTDSPL2-208ENST00000559793 DPEP1P16444 411 aa11.09□□□□□ -0.63
CTDSPL2-208ENST00000559793 KCNA3P22001 575 aa11.09□□□□□ -0.63
CTDSPL2-208ENST00000559793 TNNT2P45379 298 aaPredicted RBP11.09□□□□□ -0.63
CTDSPL2-208ENST00000559793 ARHGAP27Q6ZUM4 889 aa11.09□□□□□ -0.63
CTDSPL2-208ENST00000559793 CICQ96RK0 1608 aaPredicted RBP11.09□□□□□ -0.63
CTDSPL2-208ENST00000559793 KDRP35968 1356 aa11.08□□□□□ -0.64
CTDSPL2-208ENST00000559793 NR1I2O75469 434 aa11.08□□□□□ -0.64
CTDSPL2-208ENST00000559793 MORN1Q5T089 497 aa11.08□□□□□ -0.64
CTDSPL2-208ENST00000559793 NKX2-3Q8TAU0 364 aa11.08□□□□□ -0.64
CTDSPL2-208ENST00000559793 KDM4AO75164 1064 aa11.07□□□□□ -0.64
CTDSPL2-208ENST00000559793 RFC4P35249 363 aa11.07□□□□□ -0.64
CTDSPL2-208ENST00000559793 SCUBE3Q8IX30 993 aa11.07□□□□□ -0.64
CTDSPL2-208ENST00000559793 DCAF5Q96JK2 942 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms