RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 ZNF277Q9NRM2 450 aaPredicted RBP24.75■■□□□ 1.55
CDC42BPB-206ENST00000559790 L3MBTL3Q96JM7 780 aaPredicted RBP24.74■■□□□ 1.55
CDC42BPB-206ENST00000559790 BABAM1Q9NWV8 329 aa24.74■■□□□ 1.55
CDC42BPB-206ENST00000559790 HOXA10P31260 410 aaPredicted RBP24.73■■□□□ 1.55
CDC42BPB-206ENST00000559790 IFFO2Q5TF58 517 aa24.73■■□□□ 1.55
CDC42BPB-206ENST00000559790 NYXQ9GZU5 481 aa24.73■■□□□ 1.55
CDC42BPB-206ENST00000559790 DUOX1Q9NRD9 1551 aa24.72■■□□□ 1.55
CDC42BPB-206ENST00000559790 DPY19L2Q6NUT2 758 aa24.72■■□□□ 1.55
CDC42BPB-206ENST00000559790 CHL1O00533 1208 aa24.71■■□□□ 1.55
CDC42BPB-206ENST00000559790 EIF2S2P20042 333 aaKnown RBP24.69■■□□□ 1.54
CDC42BPB-206ENST00000559790 ALDH1B1P30837 517 aa24.68■■□□□ 1.54
CDC42BPB-206ENST00000559790 LMOD3Q0VAK6 560 aa24.68■■□□□ 1.54
CDC42BPB-206ENST00000559790 RUNDC1Q96C34 613 aa24.68■■□□□ 1.54
CDC42BPB-206ENST00000559790 PSMD1Q99460 953 aa24.68■■□□□ 1.54
CDC42BPB-206ENST00000559790 ADAMTS8Q9UP79 889 aa24.68■■□□□ 1.54
CDC42BPB-206ENST00000559790 FZD9O00144 591 aa24.67■■□□□ 1.54
CDC42BPB-206ENST00000559790 IARSP41252 1262 aaKnown RBP24.67■■□□□ 1.54
CDC42BPB-206ENST00000559790 RTKN2Q8IZC4 609 aa24.67■■□□□ 1.54
CDC42BPB-206ENST00000559790 GTF2E1P29083 439 aaPredicted RBP24.66■■□□□ 1.54
CDC42BPB-206ENST00000559790 NEUROD2Q15784 382 aa24.66■■□□□ 1.54
CDC42BPB-206ENST00000559790 SYNE4Q8N205 404 aa24.66■■□□□ 1.54
CDC42BPB-206ENST00000559790 NECTIN2Q92692 538 aa24.66■■□□□ 1.54
CDC42BPB-206ENST00000559790 TAF1DQ9H5J8 278 aaPredicted RBP24.66■■□□□ 1.54
CDC42BPB-206ENST00000559790 PRKRIP1Q9H875 184 aaPredicted RBP24.66■■□□□ 1.54
CDC42BPB-206ENST00000559790 TRPM7Q96QT4 1865 aa24.66■■□□□ 1.54
CDC42BPB-206ENST00000559790 PARP10Q53GL7 1025 aa24.65■■□□□ 1.54
CDC42BPB-206ENST00000559790 CHADLQ6NUI6 762 aa24.65■■□□□ 1.54
CDC42BPB-206ENST00000559790 XAGE3Q8WTP9 111 aa24.65■■□□□ 1.54
CDC42BPB-206ENST00000559790 CRAMP1Q96RY5 1269 aa24.65■■□□□ 1.54
CDC42BPB-206ENST00000559790 PASKQ96RG2 1323 aa24.64■■□□□ 1.54
CDC42BPB-206ENST00000559790 SLC10A5Q5PT55 438 aa24.64■■□□□ 1.54
CDC42BPB-206ENST00000559790 COPS6Q7L5N1 327 aa24.64■■□□□ 1.54
CDC42BPB-206ENST00000559790 NLRP10Q86W26 655 aa24.63■■□□□ 1.53
CDC42BPB-206ENST00000559790 DDX21Q9NR30 783 aaKnown RBP eCLIP24.63■■□□□ 1.53
CDC42BPB-206ENST00000559790 ABCC4O15439 1325 aa24.62■■□□□ 1.53
CDC42BPB-206ENST00000559790 RPGRQ92834 1020 aaKnown RBP24.62■■□□□ 1.53
CDC42BPB-206ENST00000559790 CHPF2Q9P2E5 772 aa24.62■■□□□ 1.53
CDC42BPB-206ENST00000559790 RNF123Q5XPI4 1314 aa24.61■■□□□ 1.53
CDC42BPB-206ENST00000559790 PPEF1O14829 653 aaPredicted RBP24.6■■□□□ 1.53
CDC42BPB-206ENST00000559790 CC2D2BQ6DHV5 1058 aa24.6■■□□□ 1.53
CDC42BPB-206ENST00000559790 PPP1R42Q7Z4L9 355 aa24.6■■□□□ 1.53
CDC42BPB-206ENST00000559790 UTP14AQ9BVJ6 771 aaKnown RBP24.6■■□□□ 1.53
CDC42BPB-206ENST00000559790 IQCA1LA6NCM1 817 aa24.59■■□□□ 1.53
CDC42BPB-206ENST00000559790 ITGBL1O95965 494 aaPredicted RBP24.59■■□□□ 1.53
CDC42BPB-206ENST00000559790 ZNF853P0CG23 659 aa24.59■■□□□ 1.53
CDC42BPB-206ENST00000559790 WDR43Q15061 677 aaKnown RBP eCLIP24.59■■□□□ 1.53
CDC42BPB-206ENST00000559790 LDHDQ86WU2 507 aa24.59■■□□□ 1.53
CDC42BPB-206ENST00000559790 THSD7BQ9C0I4 1608 aa24.59■■□□□ 1.53
CDC42BPB-206ENST00000559790 AIMP1Q12904 312 aaKnown RBP24.58■■□□□ 1.53
CDC42BPB-206ENST00000559790 TCIRG1Q13488 830 aa24.58■■□□□ 1.53
CDC42BPB-206ENST00000559790 MYH3P11055 1940 aa24.58■■□□□ 1.53
CDC42BPB-206ENST00000559790 SCN9AQ15858 1988 aa24.58■■□□□ 1.52
CDC42BPB-206ENST00000559790 HOXB7P09629 217 aa24.57■■□□□ 1.52
CDC42BPB-206ENST00000559790 GPC2Q8N158 579 aa24.57■■□□□ 1.52
CDC42BPB-206ENST00000559790 RBM17Q96I25 401 aaKnown RBP24.57■■□□□ 1.52
CDC42BPB-206ENST00000559790 MBIPQ9NS73 344 aa24.57■■□□□ 1.52
CDC42BPB-206ENST00000559790 PSME4Q14997 1843 aa24.56■■□□□ 1.52
CDC42BPB-206ENST00000559790 HCLS1P14317 486 aaPredicted RBP24.56■■□□□ 1.52
CDC42BPB-206ENST00000559790 CFAP44Q96MT7 982 aa24.56■■□□□ 1.52
CDC42BPB-206ENST00000559790 CREBZFQ9NS37 354 aa24.56■■□□□ 1.52
CDC42BPB-206ENST00000559790 HACL1Q9UJ83 578 aa24.56■■□□□ 1.52
CDC42BPB-206ENST00000559790 ATP6V0A2Q9Y487 856 aa24.56■■□□□ 1.52
CDC42BPB-206ENST00000559790 SPEF2Q9C093 1822 aa24.56■■□□□ 1.52
CDC42BPB-206ENST00000559790 TCERG1O14776 1098 aaKnown RBP24.55■■□□□ 1.52
CDC42BPB-206ENST00000559790 EPHX2P34913 555 aa24.55■■□□□ 1.52
CDC42BPB-206ENST00000559790 SCNN1DP51172 638 aa24.55■■□□□ 1.52
CDC42BPB-206ENST00000559790 HDGFL1Q5TGJ6 251 aa24.55■■□□□ 1.52
CDC42BPB-206ENST00000559790 ZNF428Q96B54 188 aa24.55■■□□□ 1.52
CDC42BPB-206ENST00000559790 NLRP3Q96P20 1036 aa24.55■■□□□ 1.52
CDC42BPB-206ENST00000559790 LAS1LQ9Y4W2 734 aaKnown RBP24.55■■□□□ 1.52
CDC42BPB-206ENST00000559790 ZNF646O15015 1829 aaPredicted RBP24.54■■□□□ 1.52
CDC42BPB-206ENST00000559790 COL13A1Q5TAT6 717 aaPredicted RBP24.54■■□□□ 1.52
CDC42BPB-206ENST00000559790 ISCA1Q9BUE6 129 aa24.54■■□□□ 1.52
CDC42BPB-206ENST00000559790 HSP90AB3PQ58FF7 597 aa24.53■■□□□ 1.52
CDC42BPB-206ENST00000559790 DUSP27Q5VZP5 1158 aa24.53■■□□□ 1.52
CDC42BPB-206ENST00000559790 RTFDC1Q9BY42 306 aaPredicted RBP24.53■■□□□ 1.52
CDC42BPB-206ENST00000559790 CNTNAP1P78357 1384 aa24.53■■□□□ 1.52
CDC42BPB-206ENST00000559790 CCDC184Q52MB2 194 aa24.52■■□□□ 1.52
CDC42BPB-206ENST00000559790 PLBD2Q8NHP8 589 aa24.52■■□□□ 1.52
CDC42BPB-206ENST00000559790 SH3TC1Q8TE82 1336 aa24.52■■□□□ 1.52
CDC42BPB-206ENST00000559790 APAF1O14727 1248 aa24.51■■□□□ 1.51
CDC42BPB-206ENST00000559790 AOC3Q16853 763 aa24.51■■□□□ 1.51
CDC42BPB-206ENST00000559790 GRIPAP1Q4V328 841 aa24.51■■□□□ 1.51
CDC42BPB-206ENST00000559790 EAPPQ56P03 285 aaPredicted RBP24.51■■□□□ 1.51
CDC42BPB-206ENST00000559790 LARGE2Q8N3Y3 721 aa24.51■■□□□ 1.51
CDC42BPB-206ENST00000559790 POLR2AP24928 1970 aaKnown RBP24.51■■□□□ 1.51
CDC42BPB-206ENST00000559790 HSPA1AP0DMV8 641 aaKnown RBP24.5■■□□□ 1.51
CDC42BPB-206ENST00000559790 HSPA1BP0DMV9 641 aaKnown RBP24.5■■□□□ 1.51
CDC42BPB-206ENST00000559790 JDP2Q8WYK2 163 aa24.5■■□□□ 1.51
CDC42BPB-206ENST00000559790 DBF4Q9UBU7 674 aaPredicted RBP24.5■■□□□ 1.51
CDC42BPB-206ENST00000559790 TRMT112Q9UI30 125 aaKnown RBP24.5■■□□□ 1.51
CDC42BPB-206ENST00000559790 CACNA1FO60840 1977 aa24.49■■□□□ 1.51
CDC42BPB-206ENST00000559790 MKRN1Q9UHC7 482 aaKnown RBP24.49■■□□□ 1.51
CDC42BPB-206ENST00000559790 EPS15P42566 896 aa24.48■■□□□ 1.51
CDC42BPB-206ENST00000559790 MAP1SQ66K74 1059 aaPredicted RBP24.48■■□□□ 1.51
CDC42BPB-206ENST00000559790 IFT57Q9NWB7 429 aa24.48■■□□□ 1.51
CDC42BPB-206ENST00000559790 ATP5J2-PTCD1G3V325 749 aa24.47■■□□□ 1.51
CDC42BPB-206ENST00000559790 PPIP5K2O43314 1243 aa24.47■■□□□ 1.51
CDC42BPB-206ENST00000559790 GRAPQ13588 217 aa24.47■■□□□ 1.51
CDC42BPB-206ENST00000559790 ANKRD13DQ6ZTN6 518 aa24.47■■□□□ 1.51
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