RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 EFCAB6Q5THR3 1501 aa9.44□□□□□ -0.9
CRNDE-207ENST00000559598 DUOX2Q9NRD8 1548 aa9.44□□□□□ -0.9
CRNDE-207ENST00000559598 SHPRHQ149N8 1683 aa9.43□□□□□ -0.9
CRNDE-207ENST00000559598 COL16A1Q07092 1604 aaPredicted RBP9.43□□□□□ -0.9
CRNDE-207ENST00000559598 MSH6P52701 1360 aa9.43□□□□□ -0.9
CRNDE-207ENST00000559598 TMEM2Q9UHN6 1383 aa9.43□□□□□ -0.9
CRNDE-207ENST00000559598 KCNA6P17658 529 aa9.43□□□□□ -0.9
CRNDE-207ENST00000559598 LTKP29376 864 aa9.43□□□□□ -0.9
CRNDE-207ENST00000559598 FOXD4L5Q5VV16 416 aaPredicted RBP9.43□□□□□ -0.9
CRNDE-207ENST00000559598 ERICH6Q7L0X2 663 aa9.43□□□□□ -0.9
CRNDE-207ENST00000559598 RAB6BQ9NRW1 208 aa9.43□□□□□ -0.9
CRNDE-207ENST00000559598 MAFBQ9Y5Q3 323 aaPredicted RBP9.43□□□□□ -0.9
CRNDE-207ENST00000559598 TET3O43151 1660 aa9.42□□□□□ -0.9
CRNDE-207ENST00000559598 CDK12Q9NYV4 1490 aaPredicted RBP9.42□□□□□ -0.9
CRNDE-207ENST00000559598 SPATA31A6Q5VVP1 1343 aa9.42□□□□□ -0.9
CRNDE-207ENST00000559598 PPFIA3O75145 1194 aa9.42□□□□□ -0.9
CRNDE-207ENST00000559598 RNF144AP50876 292 aaPredicted RBP9.42□□□□□ -0.9
CRNDE-207ENST00000559598 ZNF772Q68DY9 489 aaPredicted RBP9.42□□□□□ -0.9
CRNDE-207ENST00000559598 RNF217Q8TC41 542 aa9.42□□□□□ -0.9
CRNDE-207ENST00000559598 NLRP3Q96P20 1036 aa9.42□□□□□ -0.9
CRNDE-207ENST00000559598 FIGNL2A6NMB9 653 aa9.41□□□□□ -0.9
CRNDE-207ENST00000559598 IL2RAP01589 272 aa9.41□□□□□ -0.9
CRNDE-207ENST00000559598 LORP23490 312 aaPredicted RBP9.41□□□□□ -0.9
CRNDE-207ENST00000559598 GPC1P35052 558 aa9.41□□□□□ -0.9
CRNDE-207ENST00000559598 ESCO1Q5FWF5 840 aa9.41□□□□□ -0.9
CRNDE-207ENST00000559598 ETNK1Q9HBU6 452 aa9.41□□□□□ -0.9
CRNDE-207ENST00000559598 PCDHGA11Q9Y5H2 935 aa9.41□□□□□ -0.9
CRNDE-207ENST00000559598 ERBINQ96RT1 1412 aa9.4□□□□□ -0.9
CRNDE-207ENST00000559598 CHD2O14647 1828 aaKnown RBP9.4□□□□□ -0.9
CRNDE-207ENST00000559598 STAU1O95793 577 aaKnown RBP9.4□□□□□ -0.9
CRNDE-207ENST00000559598 GTF2IP78347 998 aa9.4□□□□□ -0.9
CRNDE-207ENST00000559598 TRIM50Q86XT4 487 aa9.4□□□□□ -0.9
CRNDE-207ENST00000559598 CNKSR1Q969H4 720 aa9.4□□□□□ -0.9
CRNDE-207ENST00000559598 ESYT1Q9BSJ8 1104 aa9.4□□□□□ -0.9
CRNDE-207ENST00000559598 AHDC1Q5TGY3 1603 aaPredicted RBP9.4□□□□□ -0.9
CRNDE-207ENST00000559598 ADGRB3O60242 1522 aa9.4□□□□□ -0.91
CRNDE-207ENST00000559598 NCOA3Q9Y6Q9 1424 aa9.39□□□□□ -0.91
CRNDE-207ENST00000559598 CROCC2H7BZ55 1655 aa9.39□□□□□ -0.91
CRNDE-207ENST00000559598 SCNN1DP51172 638 aa9.39□□□□□ -0.91
CRNDE-207ENST00000559598 XAGE2Q96GT9 111 aa9.39□□□□□ -0.91
CRNDE-207ENST00000559598 HRH3Q9Y5N1 445 aa9.39□□□□□ -0.91
CRNDE-207ENST00000559598 LRP6O75581 1613 aa9.38□□□□□ -0.91
CRNDE-207ENST00000559598 LMTK2Q8IWU2 1503 aa9.38□□□□□ -0.91
CRNDE-207ENST00000559598 LMOD1P29536 600 aaPredicted RBP9.38□□□□□ -0.91
CRNDE-207ENST00000559598 GDF10P55107 478 aa9.38□□□□□ -0.91
CRNDE-207ENST00000559598 MKRN1Q9UHC7 482 aaKnown RBP9.38□□□□□ -0.91
CRNDE-207ENST00000559598 WASLO00401 505 aaPredicted RBP9.37□□□□□ -0.91
CRNDE-207ENST00000559598 INHAP05111 366 aa9.37□□□□□ -0.91
CRNDE-207ENST00000559598 ATP1A2P50993 1020 aa9.37□□□□□ -0.91
CRNDE-207ENST00000559598 PSME1Q06323 249 aa9.37□□□□□ -0.91
CRNDE-207ENST00000559598 SLC27A3Q5K4L6 730 aa9.37□□□□□ -0.91
CRNDE-207ENST00000559598 CFAP70Q5T0N1 1121 aa9.37□□□□□ -0.91
CRNDE-207ENST00000559598 MEX3CQ5U5Q3 659 aaKnown RBP9.37□□□□□ -0.91
CRNDE-207ENST00000559598 LYSMD3Q7Z3D4 306 aa9.37□□□□□ -0.91
CRNDE-207ENST00000559598 GRIP2Q9C0E4 1043 aa9.37□□□□□ -0.91
CRNDE-207ENST00000559598 SLAIN2Q9P270 581 aa9.37□□□□□ -0.91
CRNDE-207ENST00000559598 SRCAPQ6ZRS2 3230 aa9.37□□□□□ -0.91
CRNDE-207ENST00000559598 MYOM3Q5VTT5 1437 aa9.37□□□□□ -0.91
CRNDE-207ENST00000559598 KANK1Q14678 1352 aa9.37□□□□□ -0.91
CRNDE-207ENST00000559598 TMEM229AB2RXF0 380 aa9.36□□□□□ -0.91
CRNDE-207ENST00000559598 CLDN10P78369 228 aa9.36□□□□□ -0.91
CRNDE-207ENST00000559598 CENPCQ03188 943 aa9.36□□□□□ -0.91
CRNDE-207ENST00000559598 PRICKLE2Q7Z3G6 844 aa9.36□□□□□ -0.91
CRNDE-207ENST00000559598 RXRBP28702 533 aa9.35□□□□□ -0.91
CRNDE-207ENST00000559598 PTSQ03393 145 aa9.35□□□□□ -0.91
CRNDE-207ENST00000559598 DIP2AQ14689 1571 aa9.35□□□□□ -0.91
CRNDE-207ENST00000559598 KANK4Q5T7N3 995 aaPredicted RBP9.35□□□□□ -0.91
CRNDE-207ENST00000559598 OGFOD1Q8N543 542 aa9.35□□□□□ -0.91
CRNDE-207ENST00000559598 DNAAF2Q9NVR5 837 aaKnown RBP9.35□□□□□ -0.91
CRNDE-207ENST00000559598 TIMELESSQ9UNS1 1208 aa9.35□□□□□ -0.91
CRNDE-207ENST00000559598 KIF15Q9NS87 1388 aa9.35□□□□□ -0.91
CRNDE-207ENST00000559598 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.34□□□□□ -0.91
CRNDE-207ENST00000559598 ZBTB7BO15156 539 aaPredicted RBP9.34□□□□□ -0.91
CRNDE-207ENST00000559598 SLC26A8Q96RN1 970 aa9.34□□□□□ -0.91
CRNDE-207ENST00000559598 FHDC1Q9C0D6 1143 aaPredicted RBP9.34□□□□□ -0.91
CRNDE-207ENST00000559598 KIAA1024Q9UPX6 916 aa9.34□□□□□ -0.91
CRNDE-207ENST00000559598 MYO5BQ9ULV0 1848 aa9.33□□□□□ -0.92
CRNDE-207ENST00000559598 NOS1P29475 1434 aa9.33□□□□□ -0.92
CRNDE-207ENST00000559598 TLR1Q15399 786 aa9.33□□□□□ -0.92
CRNDE-207ENST00000559598 LARGE2Q8N3Y3 721 aa9.33□□□□□ -0.92
CRNDE-207ENST00000559598 CCDC97Q96F63 343 aaPredicted RBP9.33□□□□□ -0.92
CRNDE-207ENST00000559598 ZSCAN10Q96SZ4 725 aaPredicted RBP9.33□□□□□ -0.92
CRNDE-207ENST00000559598 SERTAD1Q9UHV2 236 aa9.33□□□□□ -0.92
CRNDE-207ENST00000559598 SERPINA10Q9UK55 444 aa9.33□□□□□ -0.92
CRNDE-207ENST00000559598 PLEKHG1Q9ULL1 1385 aa9.33□□□□□ -0.92
CRNDE-207ENST00000559598 RPRD2Q5VT52 1461 aaKnown RBP9.33□□□□□ -0.92
CRNDE-207ENST00000559598 GCC2Q8IWJ2 1684 aa9.32□□□□□ -0.92
CRNDE-207ENST00000559598 SPATA31C2B4DYI2 1134 aa9.32□□□□□ -0.92
CRNDE-207ENST00000559598 RASA1P20936 1047 aa9.32□□□□□ -0.92
CRNDE-207ENST00000559598 SMTNP53814 917 aa9.32□□□□□ -0.92
CRNDE-207ENST00000559598 POU4F2Q12837 409 aa9.32□□□□□ -0.92
CRNDE-207ENST00000559598 CCDC102BQ68D86 513 aa9.32□□□□□ -0.92
CRNDE-207ENST00000559598 SIX5Q8N196 739 aa9.32□□□□□ -0.92
CRNDE-207ENST00000559598 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.32□□□□□ -0.92
CRNDE-207ENST00000559598 TPCN2Q8NHX9 752 aa9.32□□□□□ -0.92
CRNDE-207ENST00000559598 SLC4A9Q96Q91 983 aa9.32□□□□□ -0.92
CRNDE-207ENST00000559598 VRTNQ9H8Y1 702 aa9.32□□□□□ -0.92
CRNDE-207ENST00000559598 ZNF358Q9NW07 568 aa9.32□□□□□ -0.92
CRNDE-207ENST00000559598 SLC52A1Q9NWF4 448 aa9.32□□□□□ -0.92
CRNDE-207ENST00000559598 DCCP43146 1447 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms