RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 SMTNP53814 917 aa6.69□□□□□ -1.34
CASC4-210ENST00000559550 PSME1Q06323 249 aa6.69□□□□□ -1.34
CASC4-210ENST00000559550 CRTC2Q53ET0 693 aaPredicted RBP6.69□□□□□ -1.34
CASC4-210ENST00000559550 ILDR2Q71H61 639 aa6.69□□□□□ -1.34
CASC4-210ENST00000559550 TRIM50Q86XT4 487 aa6.69□□□□□ -1.34
CASC4-210ENST00000559550 TPCN2Q8NHX9 752 aa6.69□□□□□ -1.34
CASC4-210ENST00000559550 ZNF594Q96JF6 807 aaPredicted RBP6.69□□□□□ -1.34
CASC4-210ENST00000559550 ARID1BQ8NFD5 2236 aaPredicted RBP6.68□□□□□ -1.34
CASC4-210ENST00000559550 A0A0A0MRY4 1105 aa6.68□□□□□ -1.34
CASC4-210ENST00000559550 PAX4O43316 350 aa6.68□□□□□ -1.34
CASC4-210ENST00000559550 YBX3P16989 372 aaKnown RBP eCLIP6.68□□□□□ -1.34
CASC4-210ENST00000559550 RASA1P20936 1047 aa6.68□□□□□ -1.34
CASC4-210ENST00000559550 TXKP42681 527 aa6.68□□□□□ -1.34
CASC4-210ENST00000559550 MTFR1Q15390 333 aa6.68□□□□□ -1.34
CASC4-210ENST00000559550 NBPF1Q3BBV0 1214 aa6.68□□□□□ -1.34
CASC4-210ENST00000559550 SHISA2Q6UWI4 295 aa6.68□□□□□ -1.34
CASC4-210ENST00000559550 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.68□□□□□ -1.34
CASC4-210ENST00000559550 SLC30A3Q99726 388 aa6.68□□□□□ -1.34
CASC4-210ENST00000559550 VRTNQ9H8Y1 702 aa6.68□□□□□ -1.34
CASC4-210ENST00000559550 SERTAD1Q9UHV2 236 aa6.68□□□□□ -1.34
CASC4-210ENST00000559550 TATP17735 454 aaPredicted RBP6.67□□□□□ -1.34
CASC4-210ENST00000559550 ATP1A2P50993 1020 aa6.67□□□□□ -1.34
CASC4-210ENST00000559550 PTK7Q13308 1070 aa6.67□□□□□ -1.34
CASC4-210ENST00000559550 LARGE2Q8N3Y3 721 aa6.67□□□□□ -1.34
CASC4-210ENST00000559550 ZNF358Q9NW07 568 aa6.67□□□□□ -1.34
CASC4-210ENST00000559550 USP17L15C9J2P7 530 aa6.66□□□□□ -1.34
CASC4-210ENST00000559550 USP17L10C9JJH3 530 aa6.66□□□□□ -1.34
CASC4-210ENST00000559550 USP17L13C9JLJ4 530 aa6.66□□□□□ -1.34
CASC4-210ENST00000559550 USP17L12C9JPN9 530 aa6.66□□□□□ -1.34
CASC4-210ENST00000559550 USP17L11C9JVI0 530 aa6.66□□□□□ -1.34
CASC4-210ENST00000559550 USP17L21D6R901 530 aa6.66□□□□□ -1.34
CASC4-210ENST00000559550 USP17L18D6R9N7 530 aa6.66□□□□□ -1.34
CASC4-210ENST00000559550 USP17L22D6RA61 530 aa6.66□□□□□ -1.34
CASC4-210ENST00000559550 USP17L17D6RBQ6 530 aa6.66□□□□□ -1.34
CASC4-210ENST00000559550 USP17L19D6RCP7 530 aa6.66□□□□□ -1.34
CASC4-210ENST00000559550 USP17L20D6RJB6 530 aa6.66□□□□□ -1.34
CASC4-210ENST00000559550 NRG1Q02297 640 aaPredicted RBP6.66□□□□□ -1.34
CASC4-210ENST00000559550 USP17L24Q0WX57 530 aa6.66□□□□□ -1.34
CASC4-210ENST00000559550 TRAPPC3LQ5T215 181 aa6.66□□□□□ -1.34
CASC4-210ENST00000559550 CCDC102BQ68D86 513 aa6.66□□□□□ -1.34
CASC4-210ENST00000559550 SIX5Q8N196 739 aa6.66□□□□□ -1.34
CASC4-210ENST00000559550 SLC4A9Q96Q91 983 aa6.66□□□□□ -1.34
CASC4-210ENST00000559550 SFI1A8K8P3 1242 aa6.65□□□□□ -1.34
CASC4-210ENST00000559550 CDK2AP1O14519 115 aa6.65□□□□□ -1.34
CASC4-210ENST00000559550 ADH7P40394 386 aa6.65□□□□□ -1.34
CASC4-210ENST00000559550 LARP1Q6PKG0 1096 aaKnown RBP6.65□□□□□ -1.34
CASC4-210ENST00000559550 ARXQ96QS3 562 aa6.65□□□□□ -1.34
CASC4-210ENST00000559550 ARID3AQ99856 593 aa6.65□□□□□ -1.34
CASC4-210ENST00000559550 GJA3Q9Y6H8 435 aa6.65□□□□□ -1.34
CASC4-210ENST00000559550 FAM196BA6NMK8 535 aa6.64□□□□□ -1.35
CASC4-210ENST00000559550 TXLNAP40222 546 aa6.64□□□□□ -1.35
CASC4-210ENST00000559550 EPHA4P54764 986 aa6.64□□□□□ -1.35
CASC4-210ENST00000559550 SFSWAPQ12872 951 aaKnown RBP6.64□□□□□ -1.35
CASC4-210ENST00000559550 DPYDQ12882 1025 aa6.64□□□□□ -1.35
CASC4-210ENST00000559550 TNS4Q8IZW8 715 aa6.64□□□□□ -1.35
CASC4-210ENST00000559550 TSEN2Q8NCE0 465 aaKnown RBP6.64□□□□□ -1.35
CASC4-210ENST00000559550 C7orf43Q8WVR3 580 aa6.64□□□□□ -1.35
CASC4-210ENST00000559550 A6NJY4 79 aa6.63□□□□□ -1.35
CASC4-210ENST00000559550 ANKMY2Q8IV38 441 aa6.63□□□□□ -1.35
CASC4-210ENST00000559550 PBXIP1Q96AQ6 731 aa6.63□□□□□ -1.35
CASC4-210ENST00000559550 ZMIZ1Q9ULJ6 1067 aa6.63□□□□□ -1.35
CASC4-210ENST00000559550 LGR5O75473 907 aa6.62□□□□□ -1.35
CASC4-210ENST00000559550 LILRB5O75023 590 aa6.61□□□□□ -1.35
CASC4-210ENST00000559550 SEC13P55735 322 aa6.61□□□□□ -1.35
CASC4-210ENST00000559550 TBCELQ5QJ74 424 aa6.61□□□□□ -1.35
CASC4-210ENST00000559550 ZDHHC1Q8WTX9 485 aa6.61□□□□□ -1.35
CASC4-210ENST00000559550 STK32AQ8WU08 396 aa6.61□□□□□ -1.35
CASC4-210ENST00000559550 KRTAP9-8Q9BYQ0 159 aa6.61□□□□□ -1.35
CASC4-210ENST00000559550 CABP1Q9NZU7 370 aa6.61□□□□□ -1.35
CASC4-210ENST00000559550 SCHIP1Q9P0W5 487 aaPredicted RBP6.61□□□□□ -1.35
CASC4-210ENST00000559550 NOVA2Q9UNW9 492 aaKnown RBP6.61□□□□□ -1.35
CASC4-210ENST00000559550 PARP3Q9Y6F1 533 aa6.61□□□□□ -1.35
CASC4-210ENST00000559550 EML1O00423 815 aa6.6□□□□□ -1.35
CASC4-210ENST00000559550 BACH1O14867 736 aa6.6□□□□□ -1.35
CASC4-210ENST00000559550 ATG7O95352 703 aa6.6□□□□□ -1.35
CASC4-210ENST00000559550 FZD5Q13467 585 aa6.6□□□□□ -1.35
CASC4-210ENST00000559550 LRRC69Q6ZNQ3 347 aa6.6□□□□□ -1.35
CASC4-210ENST00000559550 BICDL1Q6ZP65 573 aa6.6□□□□□ -1.35
CASC4-210ENST00000559550 RAB44Q7Z6P3 723 aaPredicted RBP6.6□□□□□ -1.35
CASC4-210ENST00000559550 FMR1NBQ8N0W7 255 aaPredicted RBP6.6□□□□□ -1.35
CASC4-210ENST00000559550 GAS2L2Q8NHY3 880 aa6.6□□□□□ -1.35
CASC4-210ENST00000559550 M0R2N6 131 aa6.59□□□□□ -1.35
CASC4-210ENST00000559550 SPEM2Q0P670 501 aa6.59□□□□□ -1.35
CASC4-210ENST00000559550 SLC9A9Q8IVB4 645 aa6.59□□□□□ -1.35
CASC4-210ENST00000559550 FAM200AQ8TCP9 573 aa6.59□□□□□ -1.35
CASC4-210ENST00000559550 TSPAN10Q9H1Z9 355 aaPredicted RBP6.59□□□□□ -1.35
CASC4-210ENST00000559550 PCMTD2Q9NV79 361 aa6.59□□□□□ -1.35
CASC4-210ENST00000559550 RBM19Q9Y4C8 960 aaKnown RBP6.59□□□□□ -1.35
CASC4-210ENST00000559550 C21orf2O43822 256 aa6.58□□□□□ -1.36
CASC4-210ENST00000559550 RAC1P63000 192 aa6.58□□□□□ -1.36
CASC4-210ENST00000559550 FAM69CQ0P6D2 419 aa6.58□□□□□ -1.36
CASC4-210ENST00000559550 ELOAQ14241 798 aaKnown RBP6.58□□□□□ -1.36
CASC4-210ENST00000559550 PPP1R15AO75807 674 aaPredicted RBP6.57□□□□□ -1.36
CASC4-210ENST00000559550 TAL1P17542 331 aaPredicted RBP6.57□□□□□ -1.36
CASC4-210ENST00000559550 CD97P48960 835 aa6.57□□□□□ -1.36
CASC4-210ENST00000559550 SH3PXD2AQ5TCZ1 1133 aa6.57□□□□□ -1.36
CASC4-210ENST00000559550 TMEM164Q5U3C3 297 aa6.57□□□□□ -1.36
CASC4-210ENST00000559550 WFDC12Q8WWY7 111 aa6.57□□□□□ -1.36
CASC4-210ENST00000559550 HINFPQ9BQA5 517 aa6.57□□□□□ -1.36
CASC4-210ENST00000559550 USP21Q9UK80 565 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms