RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 BEND3Q5T5X7 828 aa13.92□□□□□ -0.18
TPM1-217ENST00000559108 NEURL1BA8MQ27 555 aa13.91□□□□□ -0.18
TPM1-217ENST00000559108 DDX58O95786 925 aaKnown RBP13.91□□□□□ -0.18
TPM1-217ENST00000559108 TRIM27P14373 513 aa13.91□□□□□ -0.18
TPM1-217ENST00000559108 TRIM28Q13263 835 aaKnown RBP13.91□□□□□ -0.18
TPM1-217ENST00000559108 SLC51AQ86UW1 340 aa13.91□□□□□ -0.18
TPM1-217ENST00000559108 CHMP4AQ9BY43 222 aa13.91□□□□□ -0.18
TPM1-217ENST00000559108 PTPRCP08575 1304 aa13.9□□□□□ -0.18
TPM1-217ENST00000559108 CHRNA5P30532 468 aa13.9□□□□□ -0.18
TPM1-217ENST00000559108 HSP90AB3PQ58FF7 597 aa13.9□□□□□ -0.18
TPM1-217ENST00000559108 RTL5Q5HYW3 569 aaPredicted RBP13.9□□□□□ -0.18
TPM1-217ENST00000559108 NBPF5PQ86XG9 351 aaPredicted RBP13.9□□□□□ -0.18
TPM1-217ENST00000559108 KLHL34Q8N239 644 aa13.9□□□□□ -0.18
TPM1-217ENST00000559108 CNBD1Q8NA66 436 aa13.9□□□□□ -0.18
TPM1-217ENST00000559108 SYT17Q9BSW7 474 aa13.9□□□□□ -0.18
TPM1-217ENST00000559108 RCAN3Q9UKA8 241 aa13.9□□□□□ -0.18
TPM1-217ENST00000559108 SLX4Q8IY92 1834 aa13.9□□□□□ -0.18
TPM1-217ENST00000559108 SPEF2Q9C093 1822 aa13.9□□□□□ -0.18
TPM1-217ENST00000559108 RIC1Q4ADV7 1423 aa13.9□□□□□ -0.19
TPM1-217ENST00000559108 ABCC4O15439 1325 aa13.9□□□□□ -0.19
TPM1-217ENST00000559108 RLBP1P12271 317 aa13.89□□□□□ -0.19
TPM1-217ENST00000559108 KCNA3P22001 575 aa13.89□□□□□ -0.19
TPM1-217ENST00000559108 CASP7P55210 303 aa13.89□□□□□ -0.19
TPM1-217ENST00000559108 FAM89AQ96GI7 184 aa13.89□□□□□ -0.19
TPM1-217ENST00000559108 PPP1R1BQ9UD71 204 aaPredicted RBP13.89□□□□□ -0.19
TPM1-217ENST00000559108 WWC3Q9ULE0 1092 aa13.89□□□□□ -0.19
TPM1-217ENST00000559108 PLIN1O60240 522 aa13.88□□□□□ -0.19
TPM1-217ENST00000559108 PARP10Q53GL7 1025 aa13.88□□□□□ -0.19
TPM1-217ENST00000559108 SLC4A10Q6U841 1118 aa13.88□□□□□ -0.19
TPM1-217ENST00000559108 LINS1Q8NG48 757 aa13.88□□□□□ -0.19
TPM1-217ENST00000559108 FRAT1Q92837 279 aaPredicted RBP13.88□□□□□ -0.19
TPM1-217ENST00000559108 UTP14AQ9BVJ6 771 aaKnown RBP13.88□□□□□ -0.19
TPM1-217ENST00000559108 KIF16BQ96L93 1317 aa13.88□□□□□ -0.19
TPM1-217ENST00000559108 ARFGEF1Q9Y6D6 1849 aa13.87□□□□□ -0.19
TPM1-217ENST00000559108 A0A0G2JLW4 131 aa13.87□□□□□ -0.19
TPM1-217ENST00000559108 HCLS1P14317 486 aaPredicted RBP13.87□□□□□ -0.19
TPM1-217ENST00000559108 DPEP1P16444 411 aa13.87□□□□□ -0.19
TPM1-217ENST00000559108 GCKRQ14397 625 aa13.87□□□□□ -0.19
TPM1-217ENST00000559108 CWC25Q9NXE8 425 aaPredicted RBP13.87□□□□□ -0.19
TPM1-217ENST00000559108 TRMT112Q9UI30 125 aaKnown RBP13.87□□□□□ -0.19
TPM1-217ENST00000559108 CD2APQ9Y5K6 639 aa13.87□□□□□ -0.19
TPM1-217ENST00000559108 KLRG2A4D1S0 409 aaPredicted RBP13.86□□□□□ -0.19
TPM1-217ENST00000559108 SLC10A5Q5PT55 438 aa13.86□□□□□ -0.19
TPM1-217ENST00000559108 C20orf194Q5TEA3 1177 aa13.86□□□□□ -0.19
TPM1-217ENST00000559108 ATF7IPQ6VMQ6 1270 aa13.86□□□□□ -0.19
TPM1-217ENST00000559108 CCDC191Q8NCU4 936 aa13.86□□□□□ -0.19
TPM1-217ENST00000559108 CLUAP1Q96AJ1 413 aa13.86□□□□□ -0.19
TPM1-217ENST00000559108 SH3TC1Q8TE82 1336 aa13.86□□□□□ -0.19
TPM1-217ENST00000559108 H7C1W4 665 aa13.85□□□□□ -0.19
TPM1-217ENST00000559108 PCCAP05165 728 aaPredicted RBP13.85□□□□□ -0.19
TPM1-217ENST00000559108 EPHA10Q5JZY3 1008 aa13.85□□□□□ -0.19
TPM1-217ENST00000559108 TPTE2Q6XPS3 522 aa13.85□□□□□ -0.19
TPM1-217ENST00000559108 UBE3BQ7Z3V4 1068 aa13.85□□□□□ -0.19
TPM1-217ENST00000559108 PPP1R42Q7Z4L9 355 aa13.85□□□□□ -0.19
TPM1-217ENST00000559108 ZBTB38Q8NAP3 1195 aaPredicted RBP13.85□□□□□ -0.19
TPM1-217ENST00000559108 ARHGAP45Q92619 1136 aa13.85□□□□□ -0.19
TPM1-217ENST00000559108 KAZALD1Q96I82 304 aa13.85□□□□□ -0.19
TPM1-217ENST00000559108 BRIP1Q9BX63 1249 aa13.85□□□□□ -0.19
TPM1-217ENST00000559108 A0A1B0GUL6 1792 aa13.85□□□□□ -0.19
TPM1-217ENST00000559108 LRRC37AA6NMS7 1700 aa13.84□□□□□ -0.19
TPM1-217ENST00000559108 NBPF7P0C2Y1 421 aaPredicted RBP13.84□□□□□ -0.19
TPM1-217ENST00000559108 NEXNQ0ZGT2 675 aa13.84□□□□□ -0.19
TPM1-217ENST00000559108 CRY2Q49AN0 593 aa13.84□□□□□ -0.19
TPM1-217ENST00000559108 ZKSCAN2Q63HK3 967 aa13.84□□□□□ -0.19
TPM1-217ENST00000559108 TMEM57Q8N5G2 664 aa13.84□□□□□ -0.19
TPM1-217ENST00000559108 PANK1Q8TE04 598 aa13.84□□□□□ -0.19
TPM1-217ENST00000559108 API5Q9BZZ5 524 aaKnown RBP13.84□□□□□ -0.19
TPM1-217ENST00000559108 SRCIN1Q9C0H9 1055 aa13.84□□□□□ -0.19
TPM1-217ENST00000559108 NYXQ9GZU5 481 aa13.84□□□□□ -0.19
TPM1-217ENST00000559108 IRS4O14654 1257 aaPredicted RBP13.83□□□□□ -0.2
TPM1-217ENST00000559108 ALDH1L1O75891 902 aa13.83□□□□□ -0.2
TPM1-217ENST00000559108 SRGNP10124 158 aa13.83□□□□□ -0.2
TPM1-217ENST00000559108 YBX3P16989 372 aaKnown RBP eCLIP13.83□□□□□ -0.2
TPM1-217ENST00000559108 ST5P78524 1137 aa13.83□□□□□ -0.2
TPM1-217ENST00000559108 INTS3Q68E01 1043 aaKnown RBP13.83□□□□□ -0.2
TPM1-217ENST00000559108 C2CD5Q86YS7 1000 aa13.83□□□□□ -0.2
TPM1-217ENST00000559108 USP44Q9H0E7 712 aa13.83□□□□□ -0.2
TPM1-217ENST00000559108 UTYO14607 1347 aa13.83□□□□□ -0.2
TPM1-217ENST00000559108 RNF123Q5XPI4 1314 aa13.83□□□□□ -0.2
TPM1-217ENST00000559108 CDHR2Q9BYE9 1310 aa13.83□□□□□ -0.2
TPM1-217ENST00000559108 LTBP1Q14766 1721 aa13.82□□□□□ -0.2
TPM1-217ENST00000559108 GRM8O00222 908 aa13.82□□□□□ -0.2
TPM1-217ENST00000559108 TGFB2P61812 414 aa13.82□□□□□ -0.2
TPM1-217ENST00000559108 SUCLG2Q96I99 432 aa13.82□□□□□ -0.2
TPM1-217ENST00000559108 MEIS3Q99687 375 aa13.82□□□□□ -0.2
TPM1-217ENST00000559108 FER1L6Q2WGJ9 1857 aa13.82□□□□□ -0.2
TPM1-217ENST00000559108 SNED1Q8TER0 1413 aa13.81□□□□□ -0.2
TPM1-217ENST00000559108 GTF2E1P29083 439 aaPredicted RBP13.81□□□□□ -0.2
TPM1-217ENST00000559108 FOXO4P98177 505 aa13.81□□□□□ -0.2
TPM1-217ENST00000559108 NPHP1O15259 732 aa13.8□□□□□ -0.2
TPM1-217ENST00000559108 PDE6BP35913 854 aa13.8□□□□□ -0.2
TPM1-217ENST00000559108 OLFM4Q6UX06 510 aa13.8□□□□□ -0.2
TPM1-217ENST00000559108 CCDC85AQ96PX6 553 aaPredicted RBP13.8□□□□□ -0.2
TPM1-217ENST00000559108 GOLGB1Q14789 3259 aaKnown RBP13.8□□□□□ -0.2
TPM1-217ENST00000559108 IPO8O15397 1037 aaKnown RBP13.79□□□□□ -0.2
TPM1-217ENST00000559108 CCT4P50991 539 aaKnown RBP13.79□□□□□ -0.2
TPM1-217ENST00000559108 RRP1P56182 461 aaKnown RBP13.79□□□□□ -0.2
TPM1-217ENST00000559108 DZIP1LQ8IYY4 767 aaKnown RBP13.79□□□□□ -0.2
TPM1-217ENST00000559108 ANKRD44Q8N8A2 993 aa13.79□□□□□ -0.2
TPM1-217ENST00000559108 PLA2G12BQ9BX93 195 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms