RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 SYT17Q9BSW7 474 aa7.99□□□□□ -1.13
CTDSPL2-204ENST00000558966 RTCBQ9Y3I0 505 aaKnown RBP7.99□□□□□ -1.13
CTDSPL2-204ENST00000558966 RPS6KA4O75676 772 aa7.98□□□□□ -1.13
CTDSPL2-204ENST00000558966 DCTN1Q14203 1278 aa7.98□□□□□ -1.13
CTDSPL2-204ENST00000558966 ZNF790Q6PG37 636 aa7.98□□□□□ -1.13
CTDSPL2-204ENST00000558966 ZNF454Q8N9F8 522 aa7.98□□□□□ -1.13
CTDSPL2-204ENST00000558966 FBXW7Q969H0 707 aa7.98□□□□□ -1.13
CTDSPL2-204ENST00000558966 CYP19A1P11511 503 aaPredicted RBP7.98□□□□□ -1.13
CTDSPL2-204ENST00000558966 MS4A1P11836 297 aa7.98□□□□□ -1.13
CTDSPL2-204ENST00000558966 HOXB3P14651 431 aaPredicted RBP7.98□□□□□ -1.13
CTDSPL2-204ENST00000558966 INTS5Q6P9B9 1019 aaKnown RBP7.98□□□□□ -1.13
CTDSPL2-204ENST00000558966 ZNF496Q96IT1 587 aaPredicted RBP7.98□□□□□ -1.13
CTDSPL2-204ENST00000558966 PHOX2BQ99453 314 aa7.98□□□□□ -1.13
CTDSPL2-204ENST00000558966 HEG1Q9ULI3 1381 aa7.97□□□□□ -1.13
CTDSPL2-204ENST00000558966 KCNQ3O43525 872 aa7.97□□□□□ -1.13
CTDSPL2-204ENST00000558966 HTATSF1O43719 755 aaKnown RBP7.97□□□□□ -1.13
CTDSPL2-204ENST00000558966 NFE2L2Q16236 605 aa7.97□□□□□ -1.13
CTDSPL2-204ENST00000558966 TRAPPC3LQ5T215 181 aa7.97□□□□□ -1.13
CTDSPL2-204ENST00000558966 TTC5Q8N0Z6 440 aa7.97□□□□□ -1.13
CTDSPL2-204ENST00000558966 RTF1Q92541 710 aaKnown RBP7.97□□□□□ -1.13
CTDSPL2-204ENST00000558966 CCDC87Q9NVE4 849 aa7.97□□□□□ -1.13
CTDSPL2-204ENST00000558966 SOS1Q07889 1333 aaPredicted RBP7.96□□□□□ -1.13
CTDSPL2-204ENST00000558966 MAPK8IP3Q9UPT6 1336 aa7.96□□□□□ -1.13
CTDSPL2-204ENST00000558966 BTBD11A6QL63 1104 aa7.96□□□□□ -1.13
CTDSPL2-204ENST00000558966 NEFMP07197 916 aa7.96□□□□□ -1.13
CTDSPL2-204ENST00000558966 MDM2Q00987 491 aaPredicted RBP7.96□□□□□ -1.13
CTDSPL2-204ENST00000558966 C6orf132Q5T0Z8 1188 aa7.96□□□□□ -1.13
CTDSPL2-204ENST00000558966 NLRP7Q8WX94 980 aa7.96□□□□□ -1.13
CTDSPL2-204ENST00000558966 ZBTB1Q9Y2K1 713 aa7.96□□□□□ -1.13
CTDSPL2-204ENST00000558966 KDM3BQ7LBC6 1761 aa7.96□□□□□ -1.13
CTDSPL2-204ENST00000558966 GYS1P13807 737 aa7.96□□□□□ -1.14
CTDSPL2-204ENST00000558966 DOK7Q18PE1 504 aa7.96□□□□□ -1.14
CTDSPL2-204ENST00000558966 PADI6Q6TGC4 694 aa7.96□□□□□ -1.14
CTDSPL2-204ENST00000558966 NLGN2Q8NFZ4 835 aa7.96□□□□□ -1.14
CTDSPL2-204ENST00000558966 ZDHHC16Q969W1 377 aa7.96□□□□□ -1.14
CTDSPL2-204ENST00000558966 FMNL2Q96PY5 1086 aa7.96□□□□□ -1.14
CTDSPL2-204ENST00000558966 THUMPD2Q9BTF0 503 aaKnown RBP7.96□□□□□ -1.14
CTDSPL2-204ENST00000558966 PNNQ9H307 717 aaKnown RBP7.96□□□□□ -1.14
CTDSPL2-204ENST00000558966 SRP68Q9UHB9 627 aaKnown RBP7.96□□□□□ -1.14
CTDSPL2-204ENST00000558966 COL15A1P39059 1388 aa7.95□□□□□ -1.14
CTDSPL2-204ENST00000558966 USP42Q9H9J4 1324 aaKnown RBP7.95□□□□□ -1.14
CTDSPL2-204ENST00000558966 RFC4P35249 363 aa7.95□□□□□ -1.14
CTDSPL2-204ENST00000558966 CCDC146Q8IYE0 955 aa7.95□□□□□ -1.14
CTDSPL2-204ENST00000558966 ADAM33Q9BZ11 813 aa7.95□□□□□ -1.14
CTDSPL2-204ENST00000558966 KIF13BQ9NQT8 1826 aa7.94□□□□□ -1.14
CTDSPL2-204ENST00000558966 MMP10P09238 476 aa7.94□□□□□ -1.14
CTDSPL2-204ENST00000558966 TAF7Q15545 349 aaPredicted RBP7.94□□□□□ -1.14
CTDSPL2-204ENST00000558966 ADAMTS8Q9UP79 889 aa7.94□□□□□ -1.14
CTDSPL2-204ENST00000558966 LAMB4A4D0S4 1761 aa7.94□□□□□ -1.14
CTDSPL2-204ENST00000558966 KIAA1551Q9HCM1 1747 aa7.94□□□□□ -1.14
CTDSPL2-204ENST00000558966 PRAMEF22A3QJZ6 481 aa7.94□□□□□ -1.14
CTDSPL2-204ENST00000558966 TMPOP42166 694 aaKnown RBP7.94□□□□□ -1.14
CTDSPL2-204ENST00000558966 WDR43Q15061 677 aaKnown RBP eCLIP7.94□□□□□ -1.14
CTDSPL2-204ENST00000558966 GPR153Q6NV75 609 aa7.94□□□□□ -1.14
CTDSPL2-204ENST00000558966 NLGN1Q8N2Q7 840 aa7.94□□□□□ -1.14
CTDSPL2-204ENST00000558966 MIS18AQ9NYP9 233 aa7.94□□□□□ -1.14
CTDSPL2-204ENST00000558966 SCN7AQ01118 1682 aa7.93□□□□□ -1.14
CTDSPL2-204ENST00000558966 STARD3NLO95772 234 aa7.93□□□□□ -1.14
CTDSPL2-204ENST00000558966 CANXP27824 592 aaKnown RBP7.93□□□□□ -1.14
CTDSPL2-204ENST00000558966 CLCN1P35523 988 aa7.93□□□□□ -1.14
CTDSPL2-204ENST00000558966 EIF5P55010 431 aaKnown RBP7.93□□□□□ -1.14
CTDSPL2-204ENST00000558966 RIPK4P57078 832 aa7.93□□□□□ -1.14
CTDSPL2-204ENST00000558966 CCDC184Q52MB2 194 aa7.93□□□□□ -1.14
CTDSPL2-204ENST00000558966 TMUB1Q9BVT8 246 aa7.93□□□□□ -1.14
CTDSPL2-204ENST00000558966 TEX13AQ9BXU3 409 aaPredicted RBP7.93□□□□□ -1.14
CTDSPL2-204ENST00000558966 RRP7AQ9Y3A4 280 aaKnown RBP7.93□□□□□ -1.14
CTDSPL2-204ENST00000558966 CD2APQ9Y5K6 639 aa7.93□□□□□ -1.14
CTDSPL2-204ENST00000558966 USP16Q9Y5T5 823 aa7.93□□□□□ -1.14
CTDSPL2-204ENST00000558966 C10orf71Q711Q0 1435 aa7.93□□□□□ -1.14
CTDSPL2-204ENST00000558966 RIMBP2O15034 1052 aa7.92□□□□□ -1.14
CTDSPL2-204ENST00000558966 A1BGP04217 495 aa7.92□□□□□ -1.14
CTDSPL2-204ENST00000558966 USPL1Q5W0Q7 1092 aa7.92□□□□□ -1.14
CTDSPL2-204ENST00000558966 RUNDC1Q96C34 613 aa7.92□□□□□ -1.14
CTDSPL2-204ENST00000558966 BCL2L12Q9HB09 334 aa7.92□□□□□ -1.14
CTDSPL2-204ENST00000558966 GPCPD1Q9NPB8 672 aa7.92□□□□□ -1.14
CTDSPL2-204ENST00000558966 BCORQ6W2J9 1755 aa7.92□□□□□ -1.14
CTDSPL2-204ENST00000558966 SNRPA1P09661 255 aaKnown RBP7.92□□□□□ -1.14
CTDSPL2-204ENST00000558966 DDR1Q08345 913 aa7.92□□□□□ -1.14
CTDSPL2-204ENST00000558966 METTL3Q86U44 580 aaKnown RBP7.92□□□□□ -1.14
CTDSPL2-204ENST00000558966 ZNF710Q8N1W2 664 aa7.92□□□□□ -1.14
CTDSPL2-204ENST00000558966 NARFQ9UHQ1 456 aa7.92□□□□□ -1.14
CTDSPL2-204ENST00000558966 AFDNP55196 1824 aaKnown RBP7.91□□□□□ -1.14
CTDSPL2-204ENST00000558966 PXDNLA1KZ92 1463 aa7.91□□□□□ -1.14
CTDSPL2-204ENST00000558966 NRXN2Q9P2S2 1712 aa7.91□□□□□ -1.14
CTDSPL2-204ENST00000558966 CHD4Q14839 1912 aa7.91□□□□□ -1.14
CTDSPL2-204ENST00000558966 ZPR1O75312 459 aa7.91□□□□□ -1.14
CTDSPL2-204ENST00000558966 IL6STP40189 918 aaPredicted RBP7.91□□□□□ -1.14
CTDSPL2-204ENST00000558966 PIP4K2AP48426 406 aaPredicted RBP7.91□□□□□ -1.14
CTDSPL2-204ENST00000558966 EIF4A1P60842 406 aaKnown RBP7.91□□□□□ -1.14
CTDSPL2-204ENST00000558966 PNISRQ8TF01 805 aaKnown RBP7.91□□□□□ -1.14
CTDSPL2-204ENST00000558966 LHX6Q9UPM6 363 aa7.91□□□□□ -1.14
CTDSPL2-204ENST00000558966 ADGRG1Q9Y653 693 aa7.91□□□□□ -1.14
CTDSPL2-204ENST00000558966 N4BP2Q86UW6 1770 aaPredicted RBP7.91□□□□□ -1.14
CTDSPL2-204ENST00000558966 POLRMTO00411 1230 aaKnown RBP7.9□□□□□ -1.14
CTDSPL2-204ENST00000558966 YBX3P16989 372 aaKnown RBP eCLIP7.9□□□□□ -1.14
CTDSPL2-204ENST00000558966 TM4SF1P30408 202 aa7.9□□□□□ -1.14
CTDSPL2-204ENST00000558966 SSTR3P32745 418 aaPredicted RBP7.9□□□□□ -1.14
CTDSPL2-204ENST00000558966 LMOD3Q0VAK6 560 aa7.9□□□□□ -1.14
CTDSPL2-204ENST00000558966 SCUBE2Q9NQ36 999 aa7.9□□□□□ -1.14
CTDSPL2-204ENST00000558966 ZNF330Q9Y3S2 320 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms