RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 NLGN1Q8N2Q7 840 aa13.32□□□□□ -0.28
PSMA4-207ENST00000558635 ZBTB3Q9H5J0 574 aa13.32□□□□□ -0.28
PSMA4-207ENST00000558635 MAP3K15Q6ZN16 1313 aa13.32□□□□□ -0.28
PSMA4-207ENST00000558635 ERVV-1B6SEH8 477 aa13.31□□□□□ -0.28
PSMA4-207ENST00000558635 PSEN1P49768 467 aa13.31□□□□□ -0.28
PSMA4-207ENST00000558635 HLFQ16534 295 aa13.31□□□□□ -0.28
PSMA4-207ENST00000558635 MAMSTRQ6ZN01 415 aa13.31□□□□□ -0.28
PSMA4-207ENST00000558635 G2E3Q7L622 706 aa13.31□□□□□ -0.28
PSMA4-207ENST00000558635 ZNF428Q96B54 188 aa13.31□□□□□ -0.28
PSMA4-207ENST00000558635 SPON1Q9HCB6 807 aa13.31□□□□□ -0.28
PSMA4-207ENST00000558635 C4AP0C0L4 1744 aa13.3□□□□□ -0.28
PSMA4-207ENST00000558635 PTGER2P43116 358 aa13.3□□□□□ -0.28
PSMA4-207ENST00000558635 CLEC4GQ6UXB4 293 aa13.3□□□□□ -0.28
PSMA4-207ENST00000558635 MRPL50Q8N5N7 158 aaKnown RBP13.3□□□□□ -0.28
PSMA4-207ENST00000558635 SSH1Q8WYL5 1049 aa13.3□□□□□ -0.28
PSMA4-207ENST00000558635 POLD1P28340 1107 aa13.29□□□□□ -0.28
PSMA4-207ENST00000558635 TM4SF1P30408 202 aa13.29□□□□□ -0.28
PSMA4-207ENST00000558635 RARSP54136 660 aaKnown RBP13.29□□□□□ -0.28
PSMA4-207ENST00000558635 FLIIQ13045 1269 aa13.29□□□□□ -0.28
PSMA4-207ENST00000558635 ALDH1L2Q3SY69 923 aa13.29□□□□□ -0.28
PSMA4-207ENST00000558635 TBC1D9BQ66K14 1250 aa13.29□□□□□ -0.28
PSMA4-207ENST00000558635 BICDL1Q6ZP65 573 aa13.29□□□□□ -0.28
PSMA4-207ENST00000558635 ANKRD13DQ6ZTN6 518 aa13.29□□□□□ -0.28
PSMA4-207ENST00000558635 BCL2L13Q9BXK5 485 aa13.29□□□□□ -0.28
PSMA4-207ENST00000558635 ZNF652Q9Y2D9 606 aa13.29□□□□□ -0.28
PSMA4-207ENST00000558635 RGL2O15211 777 aa13.28□□□□□ -0.28
PSMA4-207ENST00000558635 DDX58O95786 925 aaKnown RBP13.28□□□□□ -0.28
PSMA4-207ENST00000558635 MMP10P09238 476 aa13.28□□□□□ -0.28
PSMA4-207ENST00000558635 PDAP1Q13442 181 aaKnown RBP13.28□□□□□ -0.28
PSMA4-207ENST00000558635 NFIXQ14938 502 aa13.28□□□□□ -0.28
PSMA4-207ENST00000558635 GIGYF2Q6Y7W6 1299 aaKnown RBP13.28□□□□□ -0.28
PSMA4-207ENST00000558635 RIC3Q7Z5B4 369 aa13.28□□□□□ -0.28
PSMA4-207ENST00000558635 PLBD2Q8NHP8 589 aa13.28□□□□□ -0.28
PSMA4-207ENST00000558635 SMC4Q9NTJ3 1288 aa13.28□□□□□ -0.28
PSMA4-207ENST00000558635 PLCG2P16885 1265 aa13.27□□□□□ -0.29
PSMA4-207ENST00000558635 DDR1Q08345 913 aa13.27□□□□□ -0.29
PSMA4-207ENST00000558635 PI4KAP2A4QPH2 592 aa13.26□□□□□ -0.29
PSMA4-207ENST00000558635 POLRMTO00411 1230 aaKnown RBP13.26□□□□□ -0.29
PSMA4-207ENST00000558635 GPTP24298 496 aa13.26□□□□□ -0.29
PSMA4-207ENST00000558635 SCN7AQ01118 1682 aa13.26□□□□□ -0.29
PSMA4-207ENST00000558635 FKBP5Q13451 457 aaPredicted RBP13.26□□□□□ -0.29
PSMA4-207ENST00000558635 KSR2Q6VAB6 950 aa13.26□□□□□ -0.29
PSMA4-207ENST00000558635 PI4KAP1Q8N8J0 262 aa13.26□□□□□ -0.29
PSMA4-207ENST00000558635 SETDB2Q96T68 719 aa13.26□□□□□ -0.29
PSMA4-207ENST00000558635 NIP7Q9Y221 180 aaKnown RBP eCLIP13.26□□□□□ -0.29
PSMA4-207ENST00000558635 MAP3K2Q9Y2U5 619 aa13.26□□□□□ -0.29
PSMA4-207ENST00000558635 PARP3Q9Y6F1 533 aa13.26□□□□□ -0.29
PSMA4-207ENST00000558635 IRX5P78411 483 aaPredicted RBP13.25□□□□□ -0.29
PSMA4-207ENST00000558635 TCIRG1Q13488 830 aa13.25□□□□□ -0.29
PSMA4-207ENST00000558635 ZNF34Q8IZ26 560 aa13.25□□□□□ -0.29
PSMA4-207ENST00000558635 SCUBE2Q9NQ36 999 aa13.25□□□□□ -0.29
PSMA4-207ENST00000558635 BCORQ6W2J9 1755 aa13.25□□□□□ -0.29
PSMA4-207ENST00000558635 SRCAPQ6ZRS2 3230 aa13.24□□□□□ -0.29
PSMA4-207ENST00000558635 ADCY9O60503 1353 aa13.24□□□□□ -0.29
PSMA4-207ENST00000558635 FAM177BA6PVY3 158 aa13.24□□□□□ -0.29
PSMA4-207ENST00000558635 BCAR3O75815 825 aa13.24□□□□□ -0.29
PSMA4-207ENST00000558635 SERPINB2P05120 415 aa13.24□□□□□ -0.29
PSMA4-207ENST00000558635 HSP90AB3PQ58FF7 597 aa13.24□□□□□ -0.29
PSMA4-207ENST00000558635 MYD88Q99836 296 aa13.24□□□□□ -0.29
PSMA4-207ENST00000558635 METTL22Q9BUU2 404 aaPredicted RBP13.24□□□□□ -0.29
PSMA4-207ENST00000558635 ATP10DQ9P241 1426 aa13.23□□□□□ -0.29
PSMA4-207ENST00000558635 CARMIL3Q8ND23 1372 aa13.23□□□□□ -0.29
PSMA4-207ENST00000558635 UBN2Q6ZU65 1347 aa13.23□□□□□ -0.29
PSMA4-207ENST00000558635 COL24A1Q17RW2 1714 aa13.23□□□□□ -0.29
PSMA4-207ENST00000558635 F6X3S4 739 aa13.23□□□□□ -0.29
PSMA4-207ENST00000558635 ATP5J2-PTCD1G3V325 749 aa13.23□□□□□ -0.29
PSMA4-207ENST00000558635 BRPF1P55201 1214 aaPredicted RBP13.23□□□□□ -0.29
PSMA4-207ENST00000558635 DNAAF4Q8WXU2 420 aa13.23□□□□□ -0.29
PSMA4-207ENST00000558635 OCEL1Q9H607 264 aa13.23□□□□□ -0.29
PSMA4-207ENST00000558635 PPP1R1BQ9UD71 204 aaPredicted RBP13.23□□□□□ -0.29
PSMA4-207ENST00000558635 NOB1Q9ULX3 412 aaKnown RBP13.23□□□□□ -0.29
PSMA4-207ENST00000558635 PTPRCP08575 1304 aa13.22□□□□□ -0.29
PSMA4-207ENST00000558635 MKRN3Q13064 507 aaKnown RBP13.22□□□□□ -0.29
PSMA4-207ENST00000558635 PARP10Q53GL7 1025 aa13.22□□□□□ -0.29
PSMA4-207ENST00000558635 SUSD4Q5VX71 490 aa13.22□□□□□ -0.29
PSMA4-207ENST00000558635 NLRP10Q86W26 655 aa13.22□□□□□ -0.29
PSMA4-207ENST00000558635 NBPF5PQ86XG9 351 aaPredicted RBP13.22□□□□□ -0.29
PSMA4-207ENST00000558635 ISCA1Q9BUE6 129 aa13.22□□□□□ -0.29
PSMA4-207ENST00000558635 NEXNQ0ZGT2 675 aa13.21□□□□□ -0.29
PSMA4-207ENST00000558635 TRIM28Q13263 835 aaKnown RBP13.21□□□□□ -0.29
PSMA4-207ENST00000558635 CCDC24Q8N4L8 307 aa13.21□□□□□ -0.29
PSMA4-207ENST00000558635 RCAN3Q9UKA8 241 aa13.21□□□□□ -0.29
PSMA4-207ENST00000558635 NUP98P52948 1817 aa13.2□□□□□ -0.3
PSMA4-207ENST00000558635 KIF16BQ96L93 1317 aa13.2□□□□□ -0.3
PSMA4-207ENST00000558635 NPHP1O15259 732 aa13.2□□□□□ -0.3
PSMA4-207ENST00000558635 IGKV5-2P06315 115 aa13.2□□□□□ -0.3
PSMA4-207ENST00000558635 PRR5LQ6MZQ0 368 aa13.2□□□□□ -0.3
PSMA4-207ENST00000558635 SLC4A10Q6U841 1118 aa13.2□□□□□ -0.3
PSMA4-207ENST00000558635 TPTE2Q6XPS3 522 aa13.2□□□□□ -0.3
PSMA4-207ENST00000558635 PPP1R42Q7Z4L9 355 aa13.2□□□□□ -0.3
PSMA4-207ENST00000558635 CNBD1Q8NA66 436 aa13.2□□□□□ -0.3
PSMA4-207ENST00000558635 FRAT1Q92837 279 aaPredicted RBP13.2□□□□□ -0.3
PSMA4-207ENST00000558635 CACNA1FO60840 1977 aa13.2□□□□□ -0.3
PSMA4-207ENST00000558635 NTSR2O95665 410 aa13.19□□□□□ -0.3
PSMA4-207ENST00000558635 GTF2E1P29083 439 aaPredicted RBP13.19□□□□□ -0.3
PSMA4-207ENST00000558635 CWF19L2Q2TBE0 894 aaKnown RBP13.19□□□□□ -0.3
PSMA4-207ENST00000558635 BEND3Q5T5X7 828 aa13.19□□□□□ -0.3
PSMA4-207ENST00000558635 NUTM1Q86Y26 1132 aa13.19□□□□□ -0.3
PSMA4-207ENST00000558635 CCDC191Q8NCU4 936 aa13.19□□□□□ -0.3
PSMA4-207ENST00000558635 UTP14AQ9BVJ6 771 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms