RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 C3orf67Q6ZVT6 689 aa15.49■□□□□ 0.07
HERC1-202ENST00000558324 UTP14AQ9BVJ6 771 aaKnown RBP15.49■□□□□ 0.07
HERC1-202ENST00000558324 MRS2Q9HD23 443 aa15.49■□□□□ 0.07
HERC1-202ENST00000558324 IFT57Q9NWB7 429 aa15.49■□□□□ 0.07
HERC1-202ENST00000558324 ELL2O00472 640 aaPredicted RBP15.48■□□□□ 0.07
HERC1-202ENST00000558324 HOXB7P09629 217 aa15.48■□□□□ 0.07
HERC1-202ENST00000558324 ZNF853P0CG23 659 aa15.48■□□□□ 0.07
HERC1-202ENST00000558324 GNAI1P63096 354 aa15.48■□□□□ 0.07
HERC1-202ENST00000558324 HSP90AB3PQ58FF7 597 aa15.48■□□□□ 0.07
HERC1-202ENST00000558324 RIC1Q4ADV7 1423 aa15.48■□□□□ 0.07
HERC1-202ENST00000558324 ANKRD36CQ5JPF3 1778 aa15.47■□□□□ 0.07
HERC1-202ENST00000558324 TCERG1O14776 1098 aaKnown RBP15.47■□□□□ 0.07
HERC1-202ENST00000558324 SLC51AQ86UW1 340 aa15.47■□□□□ 0.07
HERC1-202ENST00000558324 NLRP10Q86W26 655 aa15.47■□□□□ 0.07
HERC1-202ENST00000558324 RBM46Q8TBY0 533 aaKnown RBP15.47■□□□□ 0.07
HERC1-202ENST00000558324 ZNF277Q9NRM2 450 aaPredicted RBP15.47■□□□□ 0.07
HERC1-202ENST00000558324 DBF4Q9UBU7 674 aaPredicted RBP15.47■□□□□ 0.07
HERC1-202ENST00000558324 FKBP4Q02790 459 aaKnown RBP eCLIP15.46■□□□□ 0.07
HERC1-202ENST00000558324 TCIRG1Q13488 830 aa15.46■□□□□ 0.07
HERC1-202ENST00000558324 DPY19L2Q6NUT2 758 aa15.46■□□□□ 0.07
HERC1-202ENST00000558324 RBM17Q96I25 401 aaKnown RBP15.46■□□□□ 0.07
HERC1-202ENST00000558324 HCLS1P14317 486 aaPredicted RBP15.45■□□□□ 0.06
HERC1-202ENST00000558324 VEGFAP15692 232 aaPredicted RBP15.45■□□□□ 0.06
HERC1-202ENST00000558324 RTKN2Q8IZC4 609 aa15.45■□□□□ 0.06
HERC1-202ENST00000558324 SYNE4Q8N205 404 aa15.45■□□□□ 0.06
HERC1-202ENST00000558324 PLBD2Q8NHP8 589 aa15.45■□□□□ 0.06
HERC1-202ENST00000558324 NLRP3Q96P20 1036 aa15.45■□□□□ 0.06
HERC1-202ENST00000558324 TRMT112Q9UI30 125 aaKnown RBP15.45■□□□□ 0.06
HERC1-202ENST00000558324 ATP5J2-PTCD1G3V325 749 aa15.44■□□□□ 0.06
HERC1-202ENST00000558324 PPEF1O14829 653 aaPredicted RBP15.44■□□□□ 0.06
HERC1-202ENST00000558324 DDNO94850 711 aaPredicted RBP15.44■□□□□ 0.06
HERC1-202ENST00000558324 HOXA10P31260 410 aaPredicted RBP15.44■□□□□ 0.06
HERC1-202ENST00000558324 ANKRD13DQ6ZTN6 518 aa15.44■□□□□ 0.06
HERC1-202ENST00000558324 C8orf58Q8NAV2 365 aa15.44■□□□□ 0.06
HERC1-202ENST00000558324 TSR2Q969E8 191 aaKnown RBP15.44■□□□□ 0.06
HERC1-202ENST00000558324 HYPKQ9NX55 129 aa15.44■□□□□ 0.06
HERC1-202ENST00000558324 DICER1Q9UPY3 1922 aaKnown RBP15.44■□□□□ 0.06
HERC1-202ENST00000558324 SH3TC1Q8TE82 1336 aa15.43■□□□□ 0.06
HERC1-202ENST00000558324 CRAMP1Q96RY5 1269 aa15.43■□□□□ 0.06
HERC1-202ENST00000558324 WDR90Q96KV7 1748 aa15.43■□□□□ 0.06
HERC1-202ENST00000558324 RNF123Q5XPI4 1314 aa15.43■□□□□ 0.06
HERC1-202ENST00000558324 POTECB2RU33 542 aa15.42■□□□□ 0.06
HERC1-202ENST00000558324 IARSP41252 1262 aaKnown RBP15.42■□□□□ 0.06
HERC1-202ENST00000558324 APLP1P51693 650 aa15.42■□□□□ 0.06
HERC1-202ENST00000558324 FSTL1Q12841 308 aa15.42■□□□□ 0.06
HERC1-202ENST00000558324 RTL5Q5HYW3 569 aaPredicted RBP15.42■□□□□ 0.06
HERC1-202ENST00000558324 SLC10A5Q5PT55 438 aa15.42■□□□□ 0.06
HERC1-202ENST00000558324 SMC1BQ8NDV3 1235 aa15.42■□□□□ 0.06
HERC1-202ENST00000558324 PHAXQ9H814 394 aaKnown RBP15.42■□□□□ 0.06
HERC1-202ENST00000558324 SALL2Q9Y467 1007 aaPredicted RBP15.42■□□□□ 0.06
HERC1-202ENST00000558324 SNED1Q8TER0 1413 aa15.42■□□□□ 0.06
HERC1-202ENST00000558324 ABCC4O15439 1325 aa15.42■□□□□ 0.06
HERC1-202ENST00000558324 ZNF541Q9H0D2 1346 aa15.42■□□□□ 0.06
HERC1-202ENST00000558324 GOLGA2Q08379 1002 aa15.41■□□□□ 0.06
HERC1-202ENST00000558324 CC2D2BQ6DHV5 1058 aa15.41■□□□□ 0.06
HERC1-202ENST00000558324 RIC3Q7Z5B4 369 aa15.41■□□□□ 0.06
HERC1-202ENST00000558324 WWC1Q8IX03 1113 aa15.41■□□□□ 0.06
HERC1-202ENST00000558324 TSPYL6Q8N831 410 aa15.41■□□□□ 0.06
HERC1-202ENST00000558324 LAMB2P55268 1798 aa15.4■□□□□ 0.06
HERC1-202ENST00000558324 HTRA3P83110 453 aa15.4■□□□□ 0.06
HERC1-202ENST00000558324 FAM89AQ96GI7 184 aa15.4■□□□□ 0.06
HERC1-202ENST00000558324 ISCA1Q9BUE6 129 aa15.4■□□□□ 0.06
HERC1-202ENST00000558324 CEP350Q5VT06 3117 aa15.39■□□□□ 0.05
HERC1-202ENST00000558324 CCDC27Q2M243 656 aa15.39■□□□□ 0.05
HERC1-202ENST00000558324 PSMD1Q99460 953 aa15.39■□□□□ 0.05
HERC1-202ENST00000558324 TMX4Q9H1E5 349 aaPredicted RBP15.39■□□□□ 0.05
HERC1-202ENST00000558324 COL4A5P29400 1685 aa15.38■□□□□ 0.05
HERC1-202ENST00000558324 CCDC30Q5VVM6 783 aa15.38■□□□□ 0.05
HERC1-202ENST00000558324 DDX46Q7L014 1031 aaKnown RBP15.38■□□□□ 0.05
HERC1-202ENST00000558324 JDP2Q8WYK2 163 aa15.38■□□□□ 0.05
HERC1-202ENST00000558324 MYD88Q99836 296 aa15.38■□□□□ 0.05
HERC1-202ENST00000558324 ATP6V0A2Q9Y487 856 aa15.38■□□□□ 0.05
HERC1-202ENST00000558324 DDX60Q8IY21 1712 aaKnown RBP15.37■□□□□ 0.05
HERC1-202ENST00000558324 POTEIP0CG38 1075 aa15.37■□□□□ 0.05
HERC1-202ENST00000558324 POTEJP0CG39 1038 aa15.37■□□□□ 0.05
HERC1-202ENST00000558324 FAM9BQ8IZU0 186 aa15.37■□□□□ 0.05
HERC1-202ENST00000558324 LARGE2Q8N3Y3 721 aa15.37■□□□□ 0.05
HERC1-202ENST00000558324 FZD9O00144 591 aa15.36■□□□□ 0.05
HERC1-202ENST00000558324 PPIP5K2O43314 1243 aa15.36■□□□□ 0.05
HERC1-202ENST00000558324 GRAPQ13588 217 aa15.36■□□□□ 0.05
HERC1-202ENST00000558324 GRIPAP1Q4V328 841 aa15.36■□□□□ 0.05
HERC1-202ENST00000558324 GRAPLQ8TC17 118 aaPredicted RBP15.36■□□□□ 0.05
HERC1-202ENST00000558324 GJA3Q9Y6H8 435 aa15.36■□□□□ 0.05
HERC1-202ENST00000558324 IQCA1LA6NCM1 817 aa15.35■□□□□ 0.05
HERC1-202ENST00000558324 BBOX1O75936 387 aa15.35■□□□□ 0.05
HERC1-202ENST00000558324 DDX58O95786 925 aaKnown RBP15.35■□□□□ 0.05
HERC1-202ENST00000558324 AOC3Q16853 763 aa15.35■□□□□ 0.05
HERC1-202ENST00000558324 TWISTNBQ3B726 338 aaPredicted RBP15.35■□□□□ 0.05
HERC1-202ENST00000558324 L3MBTL3Q96JM7 780 aaPredicted RBP15.35■□□□□ 0.05
HERC1-202ENST00000558324 STK31Q9BXU1 1019 aa15.35■□□□□ 0.05
HERC1-202ENST00000558324 FANCIQ9NVI1 1328 aa15.35■□□□□ 0.05
HERC1-202ENST00000558324 IRS4O14654 1257 aaPredicted RBP15.34■□□□□ 0.05
HERC1-202ENST00000558324 EIF6P56537 245 aaKnown RBP15.34■□□□□ 0.05
HERC1-202ENST00000558324 TRIM28Q13263 835 aaKnown RBP15.34■□□□□ 0.05
HERC1-202ENST00000558324 EAPPQ56P03 285 aaPredicted RBP15.34■□□□□ 0.05
HERC1-202ENST00000558324 DPP8Q6V1X1 898 aaPredicted RBP15.34■□□□□ 0.05
HERC1-202ENST00000558324 NIM1KQ8IY84 436 aa15.34■□□□□ 0.05
HERC1-202ENST00000558324 JARID2Q92833 1246 aaPredicted RBP15.34■□□□□ 0.05
HERC1-202ENST00000558324 CHMP4AQ9BY43 222 aa15.34■□□□□ 0.05
HERC1-202ENST00000558324 TAF1DQ9H5J8 278 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms