RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 VAMP4O75379 141 aa10.03□□□□□ -0.8
RTF1-205ENST00000558298 PTMSP20962 102 aa10.03□□□□□ -0.8
RTF1-205ENST00000558298 TRIM28Q13263 835 aaKnown RBP10.03□□□□□ -0.8
RTF1-205ENST00000558298 PROSER3Q2NL68 480 aa10.03□□□□□ -0.8
RTF1-205ENST00000558298 FER1L6Q2WGJ9 1857 aa10.03□□□□□ -0.8
RTF1-205ENST00000558298 FAM161AQ3B820 660 aa10.03□□□□□ -0.8
RTF1-205ENST00000558298 PARP10Q53GL7 1025 aa10.03□□□□□ -0.8
RTF1-205ENST00000558298 PLBD2Q8NHP8 589 aa10.03□□□□□ -0.8
RTF1-205ENST00000558298 FRAT1Q92837 279 aaPredicted RBP10.03□□□□□ -0.8
RTF1-205ENST00000558298 BRPF3Q9ULD4 1205 aa10.03□□□□□ -0.8
RTF1-205ENST00000558298 DDX60Q8IY21 1712 aaKnown RBP10.02□□□□□ -0.8
RTF1-205ENST00000558298 KLRG2A4D1S0 409 aaPredicted RBP10.02□□□□□ -0.81
RTF1-205ENST00000558298 TPM2P07951 284 aa10.02□□□□□ -0.81
RTF1-205ENST00000558298 EIF2S2P20042 333 aaKnown RBP10.02□□□□□ -0.81
RTF1-205ENST00000558298 CHRNA5P30532 468 aa10.02□□□□□ -0.81
RTF1-205ENST00000558298 CLCN1P35523 988 aa10.02□□□□□ -0.81
RTF1-205ENST00000558298 BRPF1P55201 1214 aaPredicted RBP10.02□□□□□ -0.81
RTF1-205ENST00000558298 AAMPQ13685 434 aa10.02□□□□□ -0.81
RTF1-205ENST00000558298 TTLL7Q6ZT98 887 aa10.02□□□□□ -0.81
RTF1-205ENST00000558298 ZNF34Q8IZ26 560 aa10.02□□□□□ -0.81
RTF1-205ENST00000558298 TSPYL6Q8N831 410 aa10.02□□□□□ -0.81
RTF1-205ENST00000558298 MAP7D2Q96T17 732 aa10.02□□□□□ -0.81
RTF1-205ENST00000558298 SETDB2Q96T68 719 aa10.02□□□□□ -0.81
RTF1-205ENST00000558298 CACNA1SQ13698 1873 aa10.02□□□□□ -0.81
RTF1-205ENST00000558298 SNED1Q8TER0 1413 aa10.01□□□□□ -0.81
RTF1-205ENST00000558298 HLFQ16534 295 aa10.01□□□□□ -0.81
RTF1-205ENST00000558298 COPS6Q7L5N1 327 aa10.01□□□□□ -0.81
RTF1-205ENST00000558298 BRIP1Q9BX63 1249 aa10.01□□□□□ -0.81
RTF1-205ENST00000558298 NYXQ9GZU5 481 aa10.01□□□□□ -0.81
RTF1-205ENST00000558298 PIM2Q9P1W9 311 aa10.01□□□□□ -0.81
RTF1-205ENST00000558298 ZNF330Q9Y3S2 320 aaPredicted RBP10.01□□□□□ -0.81
RTF1-205ENST00000558298 MYH3P11055 1940 aa10.01□□□□□ -0.81
RTF1-205ENST00000558298 TIAM2Q8IVF5 1701 aa10.01□□□□□ -0.81
RTF1-205ENST00000558298 UBN2Q6ZU65 1347 aa10.01□□□□□ -0.81
RTF1-205ENST00000558298 SLX4Q8IY92 1834 aa10□□□□□ -0.81
RTF1-205ENST00000558298 MYL6BP14649 208 aa10□□□□□ -0.81
RTF1-205ENST00000558298 EXOSC9Q06265 439 aaKnown RBP10□□□□□ -0.81
RTF1-205ENST00000558298 BICDL1Q6ZP65 573 aa10□□□□□ -0.81
RTF1-205ENST00000558298 ANKRD13DQ6ZTN6 518 aa10□□□□□ -0.81
RTF1-205ENST00000558298 CNBD1Q8NA66 436 aa10□□□□□ -0.81
RTF1-205ENST00000558298 XAGE3Q8WTP9 111 aa10□□□□□ -0.81
RTF1-205ENST00000558298 ISCA1Q9BUE6 129 aa10□□□□□ -0.81
RTF1-205ENST00000558298 STK31Q9BXU1 1019 aa10□□□□□ -0.81
RTF1-205ENST00000558298 WWC3Q9ULE0 1092 aa10□□□□□ -0.81
RTF1-205ENST00000558298 ABCC12Q96J65 1359 aa10□□□□□ -0.81
RTF1-205ENST00000558298 DICER1Q9UPY3 1922 aaKnown RBP9.99□□□□□ -0.81
RTF1-205ENST00000558298 NTSR2O95665 410 aa9.99□□□□□ -0.81
RTF1-205ENST00000558298 DDX58O95786 925 aaKnown RBP9.99□□□□□ -0.81
RTF1-205ENST00000558298 NCLP19338 710 aaKnown RBP9.99□□□□□ -0.81
RTF1-205ENST00000558298 TERF1P54274 439 aa9.99□□□□□ -0.81
RTF1-205ENST00000558298 TCIRG1Q13488 830 aa9.99□□□□□ -0.81
RTF1-205ENST00000558298 ALDH1L2Q3SY69 923 aa9.99□□□□□ -0.81
RTF1-205ENST00000558298 CRY2Q49AN0 593 aa9.99□□□□□ -0.81
RTF1-205ENST00000558298 DALRD3Q5D0E6 543 aaKnown RBP9.99□□□□□ -0.81
RTF1-205ENST00000558298 TPTE2Q6XPS3 522 aa9.99□□□□□ -0.81
RTF1-205ENST00000558298 MTERF4Q7Z6M4 381 aaKnown RBP9.99□□□□□ -0.81
RTF1-205ENST00000558298 NIP7Q9Y221 180 aaKnown RBP eCLIP9.99□□□□□ -0.81
RTF1-205ENST00000558298 BCS1LQ9Y276 419 aa9.99□□□□□ -0.81
RTF1-205ENST00000558298 LRRC37AA6NMS7 1700 aa9.99□□□□□ -0.81
RTF1-205ENST00000558298 SRGNP10124 158 aa9.98□□□□□ -0.81
RTF1-205ENST00000558298 PDE6BP35913 854 aa9.98□□□□□ -0.81
RTF1-205ENST00000558298 ST5P78524 1137 aa9.98□□□□□ -0.81
RTF1-205ENST00000558298 SLC10A5Q5PT55 438 aa9.98□□□□□ -0.81
RTF1-205ENST00000558298 PPP1R42Q7Z4L9 355 aa9.98□□□□□ -0.81
RTF1-205ENST00000558298 ZBTB3Q9H5J0 574 aa9.98□□□□□ -0.81
RTF1-205ENST00000558298 ANXA1P04083 346 aa9.97□□□□□ -0.81
RTF1-205ENST00000558298 PRELPP51888 382 aa9.97□□□□□ -0.81
RTF1-205ENST00000558298 FLIIQ13045 1269 aa9.97□□□□□ -0.81
RTF1-205ENST00000558298 KSR2Q6VAB6 950 aa9.97□□□□□ -0.81
RTF1-205ENST00000558298 NLRP10Q86W26 655 aa9.97□□□□□ -0.81
RTF1-205ENST00000558298 NBPF5PQ86XG9 351 aaPredicted RBP9.97□□□□□ -0.81
RTF1-205ENST00000558298 C2CD5Q86YS7 1000 aa9.97□□□□□ -0.81
RTF1-205ENST00000558298 CCDC191Q8NCU4 936 aa9.97□□□□□ -0.81
RTF1-205ENST00000558298 PTPRCP08575 1304 aa9.97□□□□□ -0.81
RTF1-205ENST00000558298 CCDC88AQ3V6T2 1871 aa9.97□□□□□ -0.81
RTF1-205ENST00000558298 ELL2O00472 640 aaPredicted RBP9.96□□□□□ -0.82
RTF1-205ENST00000558298 SLC4A2P04920 1241 aa9.96□□□□□ -0.82
RTF1-205ENST00000558298 STYK1Q6J9G0 422 aa9.96□□□□□ -0.82
RTF1-205ENST00000558298 CCDC24Q8N4L8 307 aa9.96□□□□□ -0.82
RTF1-205ENST00000558298 TTLL6Q8N841 843 aa9.96□□□□□ -0.82
RTF1-205ENST00000558298 C7orf43Q8WVR3 580 aa9.96□□□□□ -0.82
RTF1-205ENST00000558298 METTL22Q9BUU2 404 aaPredicted RBP9.96□□□□□ -0.82
RTF1-205ENST00000558298 PDCL3Q9H2J4 239 aa9.96□□□□□ -0.82
RTF1-205ENST00000558298 PHAXQ9H814 394 aaKnown RBP9.96□□□□□ -0.82
RTF1-205ENST00000558298 UPF2Q9HAU5 1272 aaKnown RBP9.96□□□□□ -0.82
RTF1-205ENST00000558298 GOLGA6L3A6NEY3 463 aa9.95□□□□□ -0.82
RTF1-205ENST00000558298 H0YIN7 160 aa9.95□□□□□ -0.82
RTF1-205ENST00000558298 NFKBIEO00221 500 aa9.95□□□□□ -0.82
RTF1-205ENST00000558298 HSP90B1P14625 803 aaKnown RBP9.95□□□□□ -0.82
RTF1-205ENST00000558298 HOXA10P31260 410 aaPredicted RBP9.95□□□□□ -0.82
RTF1-205ENST00000558298 SUSD4Q5VX71 490 aa9.95□□□□□ -0.82
RTF1-205ENST00000558298 NECTIN2Q92692 538 aa9.95□□□□□ -0.82
RTF1-205ENST00000558298 CDCA7LQ96GN5 454 aa9.95□□□□□ -0.82
RTF1-205ENST00000558298 UTP14AQ9BVJ6 771 aaKnown RBP9.95□□□□□ -0.82
RTF1-205ENST00000558298 ZMYND15Q9H091 742 aa9.95□□□□□ -0.82
RTF1-205ENST00000558298 SH3TC1Q8TE82 1336 aa9.95□□□□□ -0.82
RTF1-205ENST00000558298 CDHR2Q9BYE9 1310 aa9.95□□□□□ -0.82
RTF1-205ENST00000558298 LTBP3Q9NS15 1303 aa9.95□□□□□ -0.82
RTF1-205ENST00000558298 LTBP1Q14766 1721 aa9.94□□□□□ -0.82
RTF1-205ENST00000558298 COL4A1P02462 1669 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms