RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 NEURL1BA8MQ27 555 aa6.65□□□□□ -1.34
LRRC28-205ENST00000558248 PHF20L1A8MW92 1017 aa6.65□□□□□ -1.34
LRRC28-205ENST00000558248 TGFBR3LH3BV60 316 aa6.65□□□□□ -1.34
LRRC28-205ENST00000558248 TYRO3Q06418 890 aa6.65□□□□□ -1.34
LRRC28-205ENST00000558248 TMEM164Q5U3C3 297 aa6.65□□□□□ -1.34
LRRC28-205ENST00000558248 BTLAQ7Z6A9 289 aa6.65□□□□□ -1.34
LRRC28-205ENST00000558248 ZNF280CQ8ND82 737 aa6.65□□□□□ -1.34
LRRC28-205ENST00000558248 PRIMPOLQ96LW4 560 aa6.65□□□□□ -1.34
LRRC28-205ENST00000558248 KCNH4Q9UQ05 1017 aa6.65□□□□□ -1.34
LRRC28-205ENST00000558248 PIK3R2O00459 728 aa6.64□□□□□ -1.35
LRRC28-205ENST00000558248 SPEM2Q0P670 501 aa6.64□□□□□ -1.35
LRRC28-205ENST00000558248 DGKZQ13574 1117 aa6.64□□□□□ -1.35
LRRC28-205ENST00000558248 BEND7Q8N7W2 519 aaPredicted RBP6.64□□□□□ -1.35
LRRC28-205ENST00000558248 RRAGCQ9HB90 399 aa6.64□□□□□ -1.35
LRRC28-205ENST00000558248 STRN4Q9NRL3 753 aa6.64□□□□□ -1.35
LRRC28-205ENST00000558248 BAZ1AQ9NRL2 1556 aaPredicted RBP6.64□□□□□ -1.35
LRRC28-205ENST00000558248 RIMBP3CA6NJZ7 1639 aa6.63□□□□□ -1.35
LRRC28-205ENST00000558248 RIMBP3BA6NNM3 1639 aa6.63□□□□□ -1.35
LRRC28-205ENST00000558248 EPXP11678 715 aa6.63□□□□□ -1.35
LRRC28-205ENST00000558248 KCNQ4P56696 695 aa6.63□□□□□ -1.35
LRRC28-205ENST00000558248 PCBP4P57723 403 aaKnown RBP6.63□□□□□ -1.35
LRRC28-205ENST00000558248 SFSWAPQ12872 951 aaKnown RBP6.63□□□□□ -1.35
LRRC28-205ENST00000558248 FKBP5Q13451 457 aaPredicted RBP6.63□□□□□ -1.35
LRRC28-205ENST00000558248 CYB5RLQ6IPT4 315 aa6.63□□□□□ -1.35
LRRC28-205ENST00000558248 KANK3Q6NY19 840 aa6.63□□□□□ -1.35
LRRC28-205ENST00000558248 KIF21AQ7Z4S6 1674 aa6.63□□□□□ -1.35
LRRC28-205ENST00000558248 CLP1Q92989 425 aaKnown RBP6.63□□□□□ -1.35
LRRC28-205ENST00000558248 MYO19Q96H55 970 aa6.63□□□□□ -1.35
LRRC28-205ENST00000558248 QTRT2Q9H974 415 aaKnown RBP6.63□□□□□ -1.35
LRRC28-205ENST00000558248 RIMBP3Q9UFD9 1639 aa6.63□□□□□ -1.35
LRRC28-205ENST00000558248 PDS5BQ9NTI5 1447 aa6.62□□□□□ -1.35
LRRC28-205ENST00000558248 PTCD1O75127 700 aaKnown RBP6.62□□□□□ -1.35
LRRC28-205ENST00000558248 PDIA4P13667 645 aaKnown RBP6.62□□□□□ -1.35
LRRC28-205ENST00000558248 ALAS2P22557 587 aa6.62□□□□□ -1.35
LRRC28-205ENST00000558248 FAM69CQ0P6D2 419 aa6.62□□□□□ -1.35
LRRC28-205ENST00000558248 OCLNQ16625 522 aa6.62□□□□□ -1.35
LRRC28-205ENST00000558248 C11orf91Q3C1V1 193 aa6.62□□□□□ -1.35
LRRC28-205ENST00000558248 SYT9Q86SS6 491 aa6.62□□□□□ -1.35
LRRC28-205ENST00000558248 COL26A1Q96A83 441 aa6.62□□□□□ -1.35
LRRC28-205ENST00000558248 PNMA5Q96PV4 448 aa6.62□□□□□ -1.35
LRRC28-205ENST00000558248 EFCC1Q9HA90 598 aa6.62□□□□□ -1.35
LRRC28-205ENST00000558248 KLK14Q9P0G3 267 aa6.62□□□□□ -1.35
LRRC28-205ENST00000558248 CXXC1Q9P0U4 656 aaPredicted RBP6.62□□□□□ -1.35
LRRC28-205ENST00000558248 MKL2Q9ULH7 1088 aa6.62□□□□□ -1.35
LRRC28-205ENST00000558248 SHISA8B8ZZ34 492 aa6.61□□□□□ -1.35
LRRC28-205ENST00000558248 SIN3BO75182 1162 aa6.61□□□□□ -1.35
LRRC28-205ENST00000558248 IRS1P35568 1242 aa6.61□□□□□ -1.35
LRRC28-205ENST00000558248 KCNMA1Q12791 1236 aa6.61□□□□□ -1.35
LRRC28-205ENST00000558248 ARID3AQ99856 593 aa6.61□□□□□ -1.35
LRRC28-205ENST00000558248 C1orf115Q9H7X2 142 aa6.61□□□□□ -1.35
LRRC28-205ENST00000558248 LAMC3Q9Y6N6 1575 aa6.61□□□□□ -1.35
LRRC28-205ENST00000558248 ELOA3CA0A087WX78 387 aaPredicted RBP6.6□□□□□ -1.35
LRRC28-205ENST00000558248 ELOA3DA6NLF2 546 aaPredicted RBP6.6□□□□□ -1.35
LRRC28-205ENST00000558248 IDH3AP50213 366 aa6.6□□□□□ -1.35
LRRC28-205ENST00000558248 ARSDP51689 593 aa6.6□□□□□ -1.35
LRRC28-205ENST00000558248 ELOA3BQ3SY89 546 aa6.6□□□□□ -1.35
LRRC28-205ENST00000558248 C16orf46Q6P387 395 aa6.6□□□□□ -1.35
LRRC28-205ENST00000558248 ELOA3Q8NG57 546 aa6.6□□□□□ -1.35
LRRC28-205ENST00000558248 MKNK1Q9BUB5 465 aa6.6□□□□□ -1.35
LRRC28-205ENST00000558248 HCN2Q9UL51 889 aa6.6□□□□□ -1.35
LRRC28-205ENST00000558248 ATP2B4P23634 1241 aa6.59□□□□□ -1.35
LRRC28-205ENST00000558248 RASSF7Q02833 373 aa6.59□□□□□ -1.35
LRRC28-205ENST00000558248 C1orf229Q6ZS94 237 aaPredicted RBP6.59□□□□□ -1.35
LRRC28-205ENST00000558248 FCHSD1Q86WN1 690 aa6.59□□□□□ -1.35
LRRC28-205ENST00000558248 TMEM151AQ8N4L1 468 aa6.59□□□□□ -1.35
LRRC28-205ENST00000558248 BHMTQ93088 406 aa6.59□□□□□ -1.35
LRRC28-205ENST00000558248 IFT43Q96FT9 208 aa6.59□□□□□ -1.35
LRRC28-205ENST00000558248 SLC30A3Q99726 388 aa6.59□□□□□ -1.35
LRRC28-205ENST00000558248 HMGXB3Q12766 1538 aa6.59□□□□□ -1.35
LRRC28-205ENST00000558248 MICAL2O94851 1124 aa6.58□□□□□ -1.36
LRRC28-205ENST00000558248 GDF11O95390 407 aa6.58□□□□□ -1.36
LRRC28-205ENST00000558248 BRD2P25440 801 aaKnown RBP6.58□□□□□ -1.36
LRRC28-205ENST00000558248 CHSY3Q70JA7 882 aa6.58□□□□□ -1.36
LRRC28-205ENST00000558248 RAB44Q7Z6P3 723 aaPredicted RBP6.58□□□□□ -1.36
LRRC28-205ENST00000558248 BTBD6Q96KE9 485 aa6.58□□□□□ -1.36
LRRC28-205ENST00000558248 BCS1LQ9Y276 419 aa6.58□□□□□ -1.36
LRRC28-205ENST00000558248 CNTNAP5Q8WYK1 1306 aa6.57□□□□□ -1.36
LRRC28-205ENST00000558248 GNB5O14775 395 aa6.57□□□□□ -1.36
LRRC28-205ENST00000558248 INPP5BP32019 993 aa6.57□□□□□ -1.36
LRRC28-205ENST00000558248 CCINQ13939 588 aa6.57□□□□□ -1.36
LRRC28-205ENST00000558248 COX20Q5RI15 118 aa6.57□□□□□ -1.36
LRRC28-205ENST00000558248 TREML1Q86YW5 311 aa6.57□□□□□ -1.36
LRRC28-205ENST00000558248 TNFRSF25Q93038 417 aa6.57□□□□□ -1.36
LRRC28-205ENST00000558248 C11orf16Q9NQ32 467 aa6.57□□□□□ -1.36
LRRC28-205ENST00000558248 FAM13BQ9NYF5 915 aa6.57□□□□□ -1.36
LRRC28-205ENST00000558248 DMGDHQ9UI17 866 aaKnown RBP6.57□□□□□ -1.36
LRRC28-205ENST00000558248 KLF15Q9UIH9 416 aa6.57□□□□□ -1.36
LRRC28-205ENST00000558248 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.57□□□□□ -1.36
LRRC28-205ENST00000558248 MRC2Q9UBG0 1479 aa6.57□□□□□ -1.36
LRRC28-205ENST00000558248 ARHGEF11O15085 1522 aa6.56□□□□□ -1.36
LRRC28-205ENST00000558248 ADARB2-AS1A8MUL3 147 aa6.56□□□□□ -1.36
LRRC28-205ENST00000558248 ARID4AP29374 1257 aaPredicted RBP6.56□□□□□ -1.36
LRRC28-205ENST00000558248 ADH7P40394 386 aa6.56□□□□□ -1.36
LRRC28-205ENST00000558248 SNRPNP63162 240 aaKnown RBP6.56□□□□□ -1.36
LRRC28-205ENST00000558248 TBC1D8BQ0IIM8 1120 aa6.56□□□□□ -1.36
LRRC28-205ENST00000558248 GRIN2CQ14957 1233 aa6.56□□□□□ -1.36
LRRC28-205ENST00000558248 PCSK7Q16549 785 aa6.56□□□□□ -1.36
LRRC28-205ENST00000558248 ALYREFQ86V81 257 aaKnown RBP6.56□□□□□ -1.36
LRRC28-205ENST00000558248 UBE2OQ9C0C9 1292 aaKnown RBP6.56□□□□□ -1.36
LRRC28-205ENST00000558248 NOP53Q9NZM5 478 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms